Publications
1,232 publication(s) listed in total – filter:
2024
95 publication(s) listed
Francois El-Daher, Stephen J Enos, Louisa K Drake, Daniel Wehner, Markus Westphal, Nicola J Porter, Catherina G Becker, Thomas Becker
Open Access Microglia are essential for tissue contraction in wound closure after brain injury in zebrafish larvae
Life Science Alliance 8 (1) e202403052;
(online: Oct 17, 2024)
DOI: 10.26508/lsa.202403052
Alfonso Martinez Arias, Nicolas Rivron, Naomi Moris, Patrick Tam, Cantas Alev, Jianping Fu, Anna-Katerina Hadjantonakis, Jacob H. Hanna, Gabriella Minchiotti, Olivier Pourquie, Guojun Sheng, Liliana Solnica Krezel, Jesse V. Veenvliet, Aryeh Warmflash
Criteria for the standardization of stem-cell-based embryo models
Nat Cell Biol 26, 1625–1628
(Oct 2024)
DOI: 10.1038/s41556-024-01492-x
Alexandra Schauer, Jesse V. Veenvliet
Retinoid-enhanced human gastruloids
Nat Cell Biol 26, 1634–1636
(Oct 2024)
DOI: 10.1038/s41556-024-01517-5
Chi Fung Willis Chow, Soumyadeep Ghosh, Anna Hadarovich, Agnes Toth-Petroczy
SHARK enables sensitive detection of evolutionary homologs and functional analogs in unalignable and disordered sequences
Proc Natl Acad Sci USA 121(42):e2401622121
(Oct 9, 2024)
DOI: 10.1073/pnas.2401622121
Elias H. Barriga
Following the electric current
Nat Rev Mol Cell Biol 25, 844
(Oct 4, 2024)
DOI: 10.1038/s41580-024-00781-5
Takashi Nishio, Helmut Schiessel
Coalescence of liquid or gel-like DNA-encapsulating microdroplets
J. Chem. Phys. 161, 134904
(Oct 2, 2024)
DOI: 10.1063/5.0223951
Heidi L. van de Wouw, Shuo-Ting Yen, Manon Valet, Joseph A. Garcia, Carlos O. Gomez, Antoine Vian, Yucen Liu, Jennifer Pollock, Petr Pospíšil, Otger Campàs, Ellen May Sletten
Non-Ionic Fluorosurfactants for Droplet-Based in vivo Applications
Angew. Chem. Int. Ed., e202404956
(Sep 27, 2024)
DOI: 10.1002/ange.202404956
Boyi Wang, Frank Jülicher, Patrick Pietzonka
Condensate formation in a chiral lattice gas
New J. Phys. 26 093031
(Sep 24, 2024)
DOI: 10.1088/1367-2630/ad7490
Lukas Haugk, Holger Merlitz, Jens-Uwe Sommer
Single Chain Polymer Condensates under External Force
Macromolecules Vol 57/Issue 19
(Sep 24, 2024)
DOI: 10.1021/acs.macromol.4c01060
Metin G. Davutoglu, Veikko F. Geyer, Lukas Niese, Johannes R. Soltwedel, Marcelo L. Zoccoler, Valeria Sabatino, Robert Haase, Nils Kröger, Stefan Diez, Nicole Poulsen
Gliding motility of the diatom Craspedostauros australis coincides with the intracellular movement of raphid-specific myosins
Commun Biol 7, 1187
(Sep 23, 2024)
DOI: 10.1038/s42003-024-06889-w
Rahul M Sarate, Joel Hochstetter, Manon Valet, Adrien Hallou, Yura Song, Nordin Bansaccal, Melanie Ligare, Mariaceleste Aragona, Dan Engelman, Anaïs Bauduin, Otger Campàs*, Benjamin D Simons, Cedric Blanpain*
Dynamic regulation of tissue fluidity controls skin repair during wound healing
Cell 187(19):5298–5315.e19
(Sep 19, 2024)
* co-corresponding authors
DOI: 10.1016/j.cell.2024.07.031
Pietro Luigi Muzzeddu, Andrea Gambassi, Jens-Uwe Sommer, Abhinav Sharma
Migration and Separation of Polymers in Nonuniform Active Baths
Phys. Rev. Lett. 133, 118102
(Sep 11, 2024)
DOI: 10.1103/PhysRevLett.133.118102
Lior Aram, Diede de Haan, Neta Varsano, James B. Gilchrist, Christoph Heintze, Ron Rotkopf, Katya Rechav, Nadav Elad, Nils Kröger, Assaf Ga
Intracellular morphogenesis of diatom silica is guided by local variations in membrane curvature
Nat Commun 15, 7888
(Sep 10, 2024)
DOI: 10.1038/s41467-024-52211-x
Jochen Krattenmacher, Manuel Lera-Ramirez, Alexandre Beber, Stepan Herynek, Lenka Grycova, Xiaocheng Liu, Pavel Neuzil, Francois Nedelec, Stefan Diez, Marcus Braun, Zdenek Lansky
Ase1 selectively increases the lifetime of antiparallel microtubule overlaps
Current Biology 34(17):4071–4080
(Sep 9, 2024)
DOI: 10.1016/j.cub.2024.07.055
Rachael Deis, Tali Lerer-Goldshtein, Olha Baiko, Zohar Eyal, Dolev Brenman-Begin, Moshe Goldsmith, Sylvia Kaufmann, Uwe Heinig, Yonghui Dong, Sofya Lushchekina, Neta Varsano, Tsviya Olender, Meital Kupervaser, Ziv Porat, Smadar Levin-Zaidman, Iddo Pinkas, Rita Mateus, Dvir Gur
Genetic control over biogenic crystal morphogenesis in zebrafish
Nature Chemical Biology
(Aug 30, 2024)
DOI: 10.1038/s41589-024-01722-1
Clemens Bilsing, Erik Nützenadel, Sebastian Burgmann, Jürgen Czarske, Lars Büttner
Adaptive-optical 3D microscopy for microfluidic multiphase flows
Light: Advanced Manufacturing 5, 35
(Aug 26, 2024)
DOI: 10.37188/lam.2024.037
Evelyn Abraham, Hella Hartmann, Takeshi Yoshimatsu, Tom Baden, Michael Brand
Restoration of cone-circuit functionality in the regenerating adult zebrafish retina
Dev Cell, 59(16):2158-2170.e6.
(Aug 19, 2024)
DOI: 10.1016/j.devcel.2024.07.005
Harish P. Jain, Axel Voigt, Luiza Angheluta
From cell intercalation to flow, the importance of T1 transitions
Phys. Rev. Research 6, 033176
(Aug 15, 2024)
DOI: 10.1103/PhysRevResearch.6.033176
Sangwoo Kim, Rana Amini, Shuo-Ting Yen, Petr Pospisil, Arthur Boutillon, Ilker Ali Deniz, Otger Campàs
A nuclear jamming transition in vertebrate organogenesis
Nature Materials
(Aug 12, 2024)
DOI: 10.1038/s41563-024-01972-3
Leone Rossetti, Steffen Grosser, Juan Francisco Abenza, Léo Valon, Pere Roca-Cusachs, Ricard Alert, Xavier Trepat
Optogenetic generation of leader cells reveals a force–velocity relation for collective cell migration
Nature Physics, 1–11
(Aug 12, 2024)
DOI: 10.1038/s41567-024-02600-2
Pilar Lörzing, Philipp Schake, Michael Schlierf
Anisotropic DBSCAN for 3D SMLM Data Clustering
The Journal of Physical Chemistry B, Vol 128/Issue 33
(Aug 12, 2024)
DOI: doi/10.1021/acs.jpcb.4c02030
Markus Mukenhirn, Chen-Ho Wang, Tristan Guyomar, Matthew J. Bovyn, Michael F. Staddon, Rozemarijn E. van der Veen, Riccardo Maraspini, Linjie Lu, Cecilie Martin-Lemaitre, Masaki Sano, Martin Lehmann, Tetsuya Hiraiwa, Daniel Riveline, Alf Honigmann
Tight junctions control lumen morphology via hydrostatic pressure and junctional tension
Developmental Cell 59, 1–16
(online: Aug 12, 2024)
DOI: 10.1016/j.devcel.2024.07.016
Jana F. Fuhrmann, Abhijeet Krishna, Joris Paijmans, Charlie Duclut, Greta Cwikla, Suzanne Eaton, Marko Popović, Frank Jülicher, Carl D. Modes, Natalie A. Dye
Active shape programming drives Drosophila wing disc eversion
Sci. Adv.10,eadp0860
(Aug 9, 2024)
DOI: 10.1126/sciadv.adp0860
Tzer Han Tan, Aboutaleb Amiri, Irene Seijo-Barandiaran, Michael F. Staddon, Anne Materne, Sandra Tomas, Charlie Duclut, Marko Popović, Anne Grapin-Botton, Frank Jülicher
Emergent Chirality in Active Solid Rotation of Pancreas Spheres
PRX Life 2, 033006
(Aug 8, 2024)
DOI: 10.1103/PRXLife.2.033006
Mikolaj Ogrodnik, Juan Carlos Acosta, Peter D. Adams, Fabrizio d’Adda di Fagagna, Darren J. Baker, Cleo L. Bishop, Tamir Chandra, Manuel Collado, Jesus Gil, Vassilis Gorgoulis, Florian Gruber, Eiji Hara, Pidder Jansen-Dürr, Diana Jurk, Sundeep Khosla, James L. Kirkland, Valery Krizhanovsky, Tohru Minamino, Laura J. Niedernhofer, João F. Passos, Nadja A.R. Ring, Heinz Redl, Paul D. Robbins, Francis Rodier, Karin Scharffetter-Kochanek, John M. Sedivy, Ewa Sikora, Kenneth Witwer, Thomas von Zglinicki, Maximina H. Yun, Johannes Grillari, Marco Demaria
Guidelines for minimal information on cellular senescence experimentation in vivo
Cell 187(16):4150-4175
(Aug 8, 2024)
DOI: 10.1016/j.cell.2024.05.059
Karina Pombo-García, Omar Adame-Arana, Cecilie Martin-Lemaitre, Frank Jülicher, Alf Honigmann
Membrane prewetting by condensates promotes tight-junction belt formation
Nature 632, pages 647–655
(Aug 7, 2024)
DOI: 10.1038/s41586-024-07726-0
Arghya Majee, Christoph A. Weber, Frank Jülicher
Charge separation at liquid interfaces
Phys. Rev. Research 6, 033138
(Aug 5, 2024)
DOI: 10.1103/PhysRevResearch.6.033138
Veit Krause, Axel Voigt
Wrinkling of fluid deformable surfaces
Journal of the Royal Society Interface 21(216)
(Jul 31, 2024)
DOI: 10.1098/rsif.2024.0056
Yanis Baouche, Thomas Franosch, Matthias Meiners, Christina Kurzthaler
Active Brownian particle under stochastic orientational resetting
New J. Phys. 26 073041
(Jul 25, 2024)
DOI: 10.1088/1367-2630/ad602a
Uwe Töpfer, Jinhee Ryu, Karla Yanín Guerra Santillán, Jana Schulze, Elisabeth Fischer-Friedrich, Guy Tanentzapf, Christian Dahmann
AdamTS proteases control basement membrane heterogeneity and organ shape in Drosophila
Cell Reports 43(7), 114399
(Jul 23, 2024)
DOI: 10.1016/j.celrep.2024.114399
Liyuan Sui, Christian Dahmann
A cellular tilting mechanism important for dynamic tissue shape changes and cell differentiation in Drosophila
Developmental Cell 59(14), 1794–1808
(Jul 22, 2024)
DOI: 10.1016/j.devcel.2024.04.011
Manon Valet, Juan M Iglesias-Artola, Falk Elsner, Anatol W Fritsch, Otger Campàs
A Heating and Cooling Stage With Fast Temporal Control for Biological Applications
IEEE Open Journal of Engineering in Medicine and Biology, vol. 5, pp. 573–575
(Jul 12, 2024)
DOI: 10.1109/OJEMB.2024.3426912
Suchismita Das, Matteo Ciarchi, Ziqi Zhou, Jing Yan, Jie Zhang, Ricard Alert
Flocking by Turning Away
Phys. Rev. X 14, 031008
(Jul 12, 2024)
DOI: 10.1103/PhysRevX.14.031008
Oliver Bludau, Anke Weber, Viktoria Bosak, Veronika Kuscha,
Kristin Dietrich, Stefan Hans, Michael Brand
Inflammation is a critical factor for successful regeneration of the adult zebrafish retina in response to diffuse light lesion
Front. Cell Dev. Biol. 12:1332347.
(Jul 12, 2024)
DOI: 10.3389/fcell.2024.1332347
Xi Chen, Rabea Seyboldt, Jens-Uwe Sommer, Frank Jülicher, Tyler Harmon
Droplet Differentiation by a Chemical Switch
Phys. Rev. Lett. 133, 028402
(Jul 9, 2024)
DOI: 10.1103/PhysRevLett.133.028402
Cedric Landerer, Maxim Scheremetjew, HongKee Moon, Lena Hersemann, Agnes Toth-Petroczy
deTELpy: Python package for high-throughput detection of amino acid substitutions in mass spectrometry datasets
Bioinformatics, Volume 40, Issue 7
(Jun 28, 2024)
DOI: 10.1093/bioinformatics/btae424
Natalia Jaroszynska, Andrea Salzinger, Themistoklis M. Tsarouchas, Catherina G. Becker, Thomas Becker, David A. Lyons, Ryan B. MacDonald, Marcus Keatinge
C9ORF72 Deficiency Results in Neurodegeneration in the Zebrafish Retina
Journal of Neuroscience, 44 (25) e2128232024
(Jun 19, 2024)
DOI: 10.1523/JNEUROSCI.2128-23.2024
Julian Rode, Maja Novak, Benjamin M. Friedrich
Information Theory of Chemotactic Agents Using Both Spatial and Temporal Gradient Sensing
PRX Life 2(2), 023012
(Jun 18, 2024)
DOI: 10.1103/PRXLife.2.023012
Adriano Bolondi, Benjamin K. Law, Helene Kretzmer, Seher Ipek Gassaloglu, René Buschow, Christina Riemenschneider, Dian Yang, Maria Walther, Jesse V. Veenvliet, Alexander Meissner, Zachary D. Smith, Michelle M. Chan
Reconstructing axial progenitor field dynamics in mouse stem cell-derived embryoids
Developmental Cell 59, 1489–1505
(Jun 17, 2024)
DOI: 10.1016/j.devcel.2024.03.024
Teije C. Middelkoop, Jonas Neipel, Caitlin E. Cornell, Ronald Naumann, Lokesh G. Pimpale, Frank Jülicher, Stephan W. Grill
A cytokinetic ring-driven cell rotation achieves Hertwig’s rule in early development
Proc. Natl. Acad. Sci. USA 121(25), e2318838121
(Jun 13, 2024)
DOI: 10.1073/pnas.2318838121
Rainer Backofen, Abdelrahman Y. A. Altawil, Marco Salvalaglio, and Axel Voigt
Nonequilibrium hyperuniform states in active turbulence
Proc Natl Acad Sci U S A 121(24):e2320719121
(Jun 7, 2024)
DOI: 10.1073/pnas.2320719121
Sophie Klempahn, Helmut Schiessel, Ralf Blossey
Chromatin remodelers: a concise introduction for biophysicists
Biophysical Reviews Volume 16, pages 357–363
(Jun 6, 2024)
DOI: 10.1007/s12551-024-01199-1
Sophie Klempahn, Ralf Blossey, Helmut Schiessel
Molecular motor in a box: Attractors, repellers, and ratchets in chromatin
Phys. Rev. Research 6, 023236
(Jun 3, 2024)
DOI: 10.1103/PhysRevResearch.6.023236
Laura Meißner, Lukas Niese, Stefan Diez
Helical motion and torque generation by microtubule motors
Current Opinion in Cell Biology 88:102367
(Jun 1, 2024)
DOI: 10.1016/j.ceb.2024.102367
Julian Lich, Tom Glosemeyer, Jürgen Czarske, Robert Kuschmierz
Single-shot 3D incoherent imaging with diffuser endoscopy
Light: Advanced Manufacturing 5(2):218-228
(online: May 30, 2024)
DOI: 10.37188/lam.2024.015
Hongjuan Zhang, Dongqi Liu, Jiawei Zhang, Ellen Adams, Jingjing Gong, Wenhui Li, Bing Wang, Xueqing Liu, Renqiang Yang, Feng Wei, Heather C. Allen
GMP affected assembly behaviors of phosphatidylethanolamine monolayers elucidated by multi-resolved SFG-VS and BAM
Colloids and Surfaces B: Biointerfaces, 241, 113995
(May 26, 2024)
DOI: 10.1016/j.colsurfb.2024.113995
Maria Luisa Romero, Jonas Poehls, Anastasiia Kirilenko, Doris Richter, Tobias Jumel, Anna Shevchenko, Agnes Toth-Petroczy
Environment modulates protein heterogeneity through transcriptional and translational stop codon readthrough
Nature Communications volume 15, Article number: 4446
(May 24, 2024)
DOI: 10.1038/s41467-024-48387-x
Suse Seidemann, Florian Salomon, Karl B. Hoffmann, Thomas Kurth, Ivo F. Sbalzarini, Robert Haase, Marius Ader
Automated quantification of photoreceptor outer segments in developing and degenerating retinas on microscopy images across scales
Front. Mol. Neurosci. Sec. Methods and Model Organisms Volume 17
(May 24, 2024)
DOI: 10.3389/fnmol.2024.1398447
Arthur Boutillon, Samhita P. Banavar, Otger Campàs
Conserved physical mechanisms of cell and tissue elongation
Development 151(10): dev202687
(May 20, 2024)
DOI: 10.1242/dev.202687
Arun Pal, Dajana Grossmann, Hannes Glaß, Vitaly Zimyanin, René Günther, Marica Catinozzi, Tobias M Boeckers, Jared Sterneckert, Erik Storkebaum, Susanne Petri, Florian Wegner, Stephan W Grill, Francisco Pan-Montojo, Andreas Hermann
Glycolic acid and D-lactate—putative products of DJ-1—restore neurodegeneration in FUS - and SOD1-ALS
Life Science Alliance, 7 (8) e202302535;
(May 17, 2024)
DOI: /10.26508/lsa.202302535
Georgios Tsissios, Anthony Sallese, J. Raul Perez-Estrada, Jared A. Tangeman, Weihao Chen, Byran Smucker, Sophia C. Ratvasky, Erika Grajales-Esquivel, Arielle Martinez, Kimberly J. Visser, Alberto Joven Araus, Hui Wang, András Simon, Maximina H. Yun, Katia Del Rio-Tsonis
Macrophages modulate fibrosis during newt lens regeneration
Stem Cell Res Ther. 14;15(1):141
(May 14, 2024)
DOI: 10.1186/s13287-024-03740-1
Jiawei Sun, Robert Kuschmierz, Ori Katz, Nektarios Koukourakis, Juergen W. Czarske
Lensless fiber endomicroscopy in biomedicine
PhotoniX 5, 18
(May 14, 2024)
DOI: 10.1186/s43074-024-00133-8
Marco Salvalaglio, Dominic J. Skinner, Jörn Dunkel, Axel Voigt
Persistent homology and topological statistics of hyperuniform point clouds
Phys. Rev. Research 6, 023107
(May 1, 2024)
DOI: 10.1103/PhysRevResearch.6.023107
Seungjae Lee, Lucas Braun, Frieder Bönisch, Malte Schröder, Moritz Thümler, Marc Timme
Complexified Synchrony
Chaos 34 (5): 053141.
(May 2024)
DOI: 10.1063/5.0205897
Daniel Dornbusch, Marcel Hanke, Emilia Tomm, Charlotte Kielar, Guido Grundmeier, Adrian Keller, Karim Fahmy
Cold denaturation of DNA origami nanostructures
Chem. Commun., 60, 5590-5593
(Apr 22, 2024)
DOI: 10.1039/D3CC05985E
Charlie Duclut, Stefano Bo, Ruben Lier, Jay Armas, Piotr Surówka, Frank Jülicher
Probe particles in odd active viscoelastic fluids: How activity and dissipation determine linear stability
Phys. Rev. E 109, 044126
(Apr 10, 2024)
DOI: 10.1103/PhysRevE.109.044126
Neha Pincha Shroff, Pengfei Xu, Sangwoo Kim, Elijah R Shelton, Ben J Gross, Yucen Liu, Carlos O Gomez, Qianlin Ye, Tingsheng Yu Drennon, Jimmy K Hu, Jeremy BA Green, Otger Campàs, Ophir D Klein
Proliferation-driven mechanical compression induces signalling centre formation during mammalian organ development
Nature Cell Biology 26, 519–529
(Apr 3, 2024)
DOI: 10.1038/s41556-024-01380-4
Otger Campàs, Ivar Noordstra, Alpha S. Yap
Adherens junctions as molecular regulators of emergent tissue mechanics
Nat Rev Mol Cell Biol 25(4):252–269
(Apr 2024)
DOI: 10.1038/s41580-023-00688-7
Bethan Clark, Aaron Hickey, Aleksandra Marconi, Bettina Fischer, Joel Elkin, Rita Mateus, M. Emília Santos
Developmental plasticity and variability in the formation of egg-spots, a pigmentation ornament in the cichlid Astatotilapia calliptera
Evolution & Development, 26, e12475
(Mar 30, 2024)
DOI: 10.1111/ede.12475
Maja Illig, Kevin Jahnke, Lukas P Weise, Marlene Scheffold, Ulrike Mersdorf, Hauke Drechsler, Yixin Zhang, Stefan Diez, Jan Kierfeld, Kerstin Göpfrich
Triggered contraction of self-assembled micron-scale DNA nanotube rings
Nat Commun 15(1):2307
(Mar 14, 2024)
DOI: 10.1038/s41467-024-46339-z
Ivan Mestres, Azra Atabay, Joan-Carles Escolano, Solveig Arndt, Klara Schmidtke, Maximilian Einsiedel, Melina Patsonis, Lizbeth Airais Bolaños-Castro, Maximina Yun, Nadine Bernhardt, Anna Taubenberger, Federico Calegari
Manipulation of the nuclear envelope-associated protein SLAP during mammalian brain development affects cortical lamination and exploratory behavior
Biol Open 1;13(3):bio060359
(Mar 11, 2024)
DOI: 10.1242/bio.060359
Christina Kurzthaler, Danielle L. Chase, Howard A. Stone
Surface corrugations induce helical near-surface flows and transport in microfluidic channels
Journal of Fluid Mechanics. 982:A31
(Mar 11, 2024)
DOI: 10.1017/jfm.2024.106
Tina Helmecke, Dominik Hahn, André Ruland, Mikhail V. Tsurkan, Manfred F. Maitz, Carsten Werner
Adsorbed polymer conjugates to adaptively inhibit blood coagulation activation by medical membranes
Journal of Controlled Release 368:344–354
(Mar 6, 2024)
DOI: 10.1016/j.jconrel.2024.02.034
Federico Biavati, Luca Saba, Melinda Boussoussou, Klaus F. Kofoed, Theodora Benedek, Patrick Donnelly, José Rodríguez-Palomares, Andrejs Erglis, Cyril Štěchovský, Gintarė Šakalytė, Nada Čemerlić Ađić, Matthias Gutberlet, Jonathan D. Dodd, Ignacio Diez, Gershan Davis, Elke Zimmermann, Cezary Kępka, Radosav Vidakovic, Marco Francone, Małgorzata Ilnicka-Suckiel, Fabian Plank, Juhani Knuuti, Rita Faria, Stephen Schröder, Colin Berry, Balazs Ruzsics, Nina Rieckmann, Christine Kubiak, Kristian Schultz Hansen, Jacqueline Müller-Nordhorn, Pál Maurovich-Horvat, Per E. Sigvardsen, Imre Benedek, Clare Orr, Filipa Xavier Valente, Ligita Zvaigzne, Vojtěch Suchánek, Antanas Jankauskas, Filip Ađić, Michael Woinke, Diarmaid Cadogan, Iñigo Lecumberri, Erica Thwaite, Mariusz Kruk, Aleksandar N. Neskovic, Massimo Mancone, Donata Kuśmierz, Gudrun Feuchtner, Mikko Pietilä, Vasco Gama Ribeiro, Tanja Drosch, Christian Delles, Riccardo Cau, Michael Fisher, Bela Merkely, Charlotte Kragelund, Rosca Aurelian, Stephanie Kelly, Bruno García del Blanco, Ainhoa Rubio, Bálint Szilveszter, Jens D. Hove, Ioana Rodean, Susan Regan, Hug Cuéllar Calabria, István Ferenc Édes, Linnea Larsen, Roxana Hodas, Adriane E. Napp, Robert Haase, Sarah Feger, Mahmoud Mohamed, Lina M. Serna-Higuita, Konrad Neumann, Henryk Dreger, Matthias Rief, Viktoria Wieske, Matthew J. Budoff, Melanie Estrella, Peter Martus, Maria Bosserdt, Marc Dewey
Coronary Artery Calcium Score Predicts Major Adverse Cardiovascular Events in Stable Chest Pain
Radiology 310(3)
(Mar 5, 2024)
DOI: 10.1148/radiol.231557
Felix Horst, Elisabeth Bodenstein, Michael Brand, Stefan Hans, Leonhard Karsch, Elisabeth Lessmann, Steffen Löck, Michael Schürer, Jörg Pawelke, Elke Beyreuther
Dose and dose rate dependence of the tissue sparing effect at ultra-high dose rate studied for proton and electron beams using the zebrafish embryo model
Radiother Oncol. 194:110197.
(online: Mar 5, 2024)
DOI: 10.1016/j.radonc.2024.110197
Rhandrey Maestri, Subhadrakutty Radhakrishnakumar, Florian Bürkle, Wei Ding, Lars Büttner, Jürgen Czarske, Uwe Hampel, Gregory Lecrivain
Equilibrium Taylor bubble in a narrow vertical tube with constriction
Physics of Fluids 36(3)
(Mar 4, 2024)
DOI: 10.1063/5.0180157
Dinesh Sundaravadivelu Devarajan, Jiahui Wang, Beata Szała-Mendyk, Shiv Rekhi, Arash Nikoubashman, Young C. Kim, Jeetain Mittal
Sequence-dependent material properties of biomolecular condensates and their relation to dilute phase conformations
Nat Commun 15(1), 1912
(Mar 1, 2024)
DOI: 10.1038/s41467-024-46223-w
Volodymyr Prokopets, Sebastian Götz, Uwe Aßmann, Christian Gutsche, Atul Anantheswar, Ines Wollny, Jerome Thiessat, Juliana Hildebrandt, Michael Kaliske, Wolfgang Lehner
Work in Progress: Towards a Single Underlying Model for the Digital Twin of Future Road Infrastructures
2023 IEEE Smart World Congress (SWC)
(Mar 1, 2024)
DOI: 10.1109/swc57546.2023.10449106
Laura Meißner, Lukas Niese, Irene Schüring, Aniruddha Mitra, Stefan Diez
Human kinesin-5 KIF11 drives the helical motion of anti-parallel and parallel microtubules around each other
EMBO J 43:1244–1256
(Feb 29, 2024)
DOI: 10.1038/s44318-024-00048-x
Iaroslav Babenko, Nils Kröger, Benjamin M. Friedrich
Mechanism of branching morphogenesis inspired by diatom silica formation
PNAS 121(10) e2309518121
(Feb 29, 2024)
DOI: 10.1073/pnas.2309518121
Andreas Müller, Deborah Schmidt, Jan Philipp Albrecht, Lucas Rieckert, Maximilian Otto, Leticia Elizabeth Galicia Garcia, Gunar Fabig, Michele Solimena, Martin Weigert
Modular segmentation, spatial analysis and visualization of volume electron microscopy datasets
Nat Protoc 19(5):1436–1466
(Feb 29, 2024)
DOI: 10.1038/s41596-024-00957-5
Connor A. Schmidt, Eric Tambutté, Alexander A. Venn, Zhaoyong Zou, Cristina Castillo Alvarez, Laurent S. Devriendt, Hans A. Bechtel, Cayla A. Stifler, Samantha Anglemyer, Carolyn P. Breit, Connor L. Foust, Andrii Hopanchuk, Connor N. Klaus, Isaac J. Kohler, Isabelle M. LeCloux, Jaiden Mezera, Madeline R. Patton, Annie Purisch, Virginia Quach, Jaden S. Sengkhammee, Tarak Sristy, Shreya Vattem, Evan J. Walch, Marie Albéric, Yael Politi, Peter Fratzl, Sylvie Tambutté, Pupa U.P.A. Gilbert
Myriad Mapping of nanoscale minerals reveals calcium carbonate hemihydrate in forming nacre and coral biominerals
Nat Commun 15(1), 1812
(Feb 28, 2024)
DOI: 10.1038/s41467-024-46117-x
Martin Neukam, Pia Sala, Andreas-David Brunner, Katharina Ganß, Alessandra Palladini, Michal Grzybek, Oleksandra Topcheva, Jovana Vasiljević, Johannes Broichhagen, Kai Johnsson, Thomas Kurth, Matthias Mann, Ünal Coskun, Michele Solimena
Purification of time-resolved insulin granules reveals proteomic and lipidomic changes during granule aging
Cell Reports 43(3):113836
(Feb 27, 2024)
DOI: 10.1016/j.celrep.2024.113836
Cedric Landerer, Jonas Poehls, Agnes Toth-Petroczy
Fitness Effects of Phenotypic Mutations at Proteome-Scale Reveal Optimality of Translation Machinery
Molecular Biology and Evolution 41(3)
(Feb 27, 2024)
DOI: 10.1093/molbev/msae048
Stefan Golfier, Thomas Quail, Jan Brugués
Single-Molecule Approaches to Study DNA Condensation
Castro, A., Lacroix, B. (eds) Cell Cycle Control. Methods in Molecular Biology, vol 2740. Humana, New York, NY
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Clinical care advice for monitoring of islet autoantibody positive individuals with presymptomatic type 1 diabetes
Diabetes Metabolism Res 40(2)
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Nishant Kumar, Lukas Krause, Thomas Wondrak, Sven Eckert, Kerstin Eckert, Stefan Gumhold
Robust Reconstruction of the Void Fraction from Noisy Magnetic Flux Density Using Invertible Neural Networks
Sensors 24(4):1213
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Lea Happel, Axel Voigt
Coordinated Motion of Epithelial Layers on Curved Surfaces
Phys. Rev. Lett. 132, 078401
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Nagaraja Chappidi, Thomas Quail, Simon Doll, Laura T. Vogel, Radoslav Aleksandrov, Suren Felekyan, Ralf Kühnemuth, Stoyno Stoynov, Claus A.M. Seidel, Jan Brugués, Marcus Jahnel, Titus M. Franzmann, Simon Alberti
PARP1-DNA co-condensation drives DNA repair site assembly to prevent disjunction of broken DNA ends
Cell 187(4):945–961.e18
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Liliya Mukhametzyanova, Lukas Theo Schmitt, Julia Torres-Rivera, Teresa Rojo-Romanos, Felix Lansing, Maciej Paszkowski-Rogacz, Heike Hollak, Melanie Brux, Martina Augsburg, Paul Martin Schneider, Frank Buchholz
Activation of recombinases at specific DNA loci by zinc-finger domain insertions
Nat Biotechnol
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Erik Kalz, Hidde Derk Vuijk, Jens-Uwe Sommer, Ralf Metzler, Abhinav Sharma
Oscillatory Force Autocorrelations in Equilibrium Odd-Diffusive Systems
Phys. Rev. Lett. 132(5), 057102
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Tijue Wang, Jakob Dremel, Sven Richter, Witold Polanski, Ortrud Uckermann, Ilker Eyüpoglu, Jürgen W. Czarske, Robert Kuschmierz
Resolution-enhanced multi-core fiber imaging learned on a digital twin for cancer diagnosis
Neurophoton. 11(S1) S11505
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Kathrin Schmeisser, Damla Kaptan, Bharath Kumar Raghuraman, Andrej Shevchenko, Jonathan Rodenfels, Sider Penkov, Teymuras V. Kurzchalia
Mobilization of cholesterol induces the transition from quiescence to growth in Caenorhabditis elegans through steroid hormone and mTOR signaling
Commun Biol 7(1), 121
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K. Yanín Guerra Santillán, Christian Dahmann, Elisabeth Fischer-Friedrich
Elastic Contractile Stress in the Basement Membrane Generates Basal Tension in Epithelia
PRX Life 2, 013004
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Michael Nestler, Simon Praetorius, Zhi-Feng Huang, Hartmut Löwen, Axel Voigt
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J. Phys.: Condens. Matter 36(18):185001
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Richard Nauber, Lars Büttner, Jürgen Czarske
Special Issue on Computational Ultrasound Imaging and Applications
Applied Sciences 14(3):964
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Alexandra Meliou, Sourav Bhowmick, Karl Aberer, Divy Agrawal, Angela Bonifati, Vanessa Braganholo, Floris Geerts, Wolfgang Lehner, Divesh Srivastava
Peer-Reviewing Processes and Incentives: Data Management Community Survey Results
SIGMOD Rec. 52(4):41–46
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Priyanka Bhatia, Marc Bickle, Amay A. Agrawal, Buster Truss, Aikaterina Nikolaidi, Kathrin Brockmann, Lydia Reinhardt, Stefanie Vogel, Eva M. Szegoe, Arun Pal, Andreas Hermann, Ivan Mikicic, Maximina Yun, Björn Falkenburger, Jared Sterneckert
Axonal Lysosomal Assays for Characterizing the Effects of LRRK2 G2019S
Biology (Basel) 13(1):58
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Marietta Döring, Melanie Brux, Maciej Paszkowski-Rogacz, Pedro M Guillem-Gloria, Frank Buchholz, M Teresa Pisabarro, Mirko Theis
Nucleolar protein TAAP1/C22orf46confers pro-survival signaling in non-small cell lung cancer
Life Sci. Alliance 7(4):e202302257
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Francine Kolley, Clara Sidor, Benoit Dehapiot, Frank Schnorrer, Benjamin M. Friedrich
Mechanisms of Sarcomere Assembly in Muscle Cells Inferred from Sequential Ordering of Myofibril Components
PRX Life 2(1), 013002
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Aaron D. Wolfe, John N. Koberstein, Chadwick B. Smith, Melissa L. Stewart, Ian J. Gonzalez, Marc Hammarlund, Anthony A. Hyman, Philip J. S. Stork, Richard H. Goodman, Daniel A. Colón-Ramos
Local and dynamic regulation of neuronal glycolysis in vivo
Proc. Natl. Acad. Sci. U.S.A. 121(3)
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Jorge Lázaro, Jaroslaw Sochacki, Miki Ebisuya
The stem cell zoo for comparative studies of developmental tempo
Current Opinion in Genetics & Development 84:102149
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Jiawei Sun, Bin Zhao, Dong Wang, Zhigang Wang, Jie Zhang, Nektarios Koukourakis, Júergen W. Czarske, Xuelong Li
Calibration-free quantitative phase imaging in multi-core fiber endoscopes using end-to-end deep learning
Opt. Lett. 49(2):342
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Laura K. Wiley, Jonathan A. Shortt, Emily R. Roberts, Jan Lowery, Elizabeth Kudron, Meng Lin, David Mayer, Melissa Wilson, Tonya M. Brunetti, Sameer Chavan, Tzu L. Phang, Nikita Pozdeyev, Joseph Lesny, Stephen J. Wicks, Ethan T. Moore, Joshua L. Morgenstern, Alanna N. Roff, Elise L. Shalowitz, Adrian Stewart, Cole Williams, Michelle N. Edelmann, Madelyne Hull, J. Tacker Patton, Lisen Axell, Lisa Ku, Yee Ming Lee, Jean Jirikowic, Anna Tanaka, Emily Todd, Sarah White, Brett Peterson, Emily Hearst, Richard Zane, Casey S. Greene, Rasika Mathias, Marilyn Coors, Matthew Taylor, Debashis Ghosh, Michael G. Kahn, Ian M. Brooks, Christina L. Aquilante, David Kao, Nicholas Rafaels, Kristy R. Crooks, Steve Hess, Kathleen C. Barnes, Christopher R. Gignoux
Building a vertically integrated genomic learning health system: The biobank at the Colorado Center for Personalized Medicine
The American Journal of Human Genetics 111(1):11–23
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Jiawei Sun, Bin Yang, Nektarios Koukourakis, Jochen Guck, Juergen W. Czarske
AI-driven projection tomography with multicore fibre-optic cell rotation
Nat Commun 15(1), 147
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2023
226 publication(s) listed
Dennis Pohle, Fabio A. Barbosa, Filipe M. Ferreira, Stefan Rothe, Juergen W Czarske
Digital few-mode fiber multiplexer using multiplane light conversion
2023 IEEE Photonics Conference (IPC)
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DOI: 10.1109/ipc57732.2023.10360545
Qian Zhang, Yuan Sui, Stefan Rothe, Jürgen Czarske
Physics-informed mode decomposition neural network for structured light in multimode fibers
2023 IEEE Photonics Conference (IPC)
(Dec 25, 2023)
DOI: 10.1109/ipc57732.2023.10360643
T.‐Y. Dora Tang, Xin Huang
Artificial Cells: From Basic Assembly to Directed Functionality
Small Methods 7(12)
(Dec 23, 2023)
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Elena Bachini, Veit Krause, Ingo Nitschke, Axel Voigt
Derivation and simulation of a two-phase fluid deformable surface model
Journal of Fluid Mechanics 977:A41
(Dec 21, 2023)
DOI: 10.1017/jfm.2023.943
Romina Piscitello-Gómez, Franz S Gruber, Abhijeet Krishna, Charlie Duclut, Carl D Modes, Marko Popović, Frank Jülicher, Natalie A Dye, Suzanne Eaton
Core PCP mutations affect short-time mechanical properties but not tissue morphogenesis in the Drosophila pupal wing
eLife 12:e85581
(Dec 20, 2023)
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Piotr Surówka, Anton Souslov, Frank Jülicher, Debarghya Banerjee
Odd Cosserat Elasticity in Active Materials
Phys. Rev. E 108, 064609
(Dec 15, 2023)
DOI: 10.1103/PhysRevE.108.064609
Abhinav Singh, Ivo F. Sbalzarini, Anas Obeidat
Entropically damped artificial compressibility for the discretization corrected particle strength exchange method in incompressible fluid mechanics
Computers & Fluids 267, 106074
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DOI: 10.1016/j.compfluid.2023.106074
Katarzyna P. Adamala, Marileen Dogterom, Yuval Elani, Petra Schwille, Masahiro Takinoue, T-Y Dora Tang
Present and future of synthetic cell development
Nat Rev Mol Cell Biol 25(3):162–167
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Jonathan Bauermann, Giacomo Bartolucci, Job Boekhoven, Christoph A. Weber, Frank Jülicher
Formation of Liquid Shells in Active Droplet systems
Phys. Rev. Research 5, 043246
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DOI: 10.1103/PhysRevResearch.5.043246
Adrian Pascal Nievergelt, Dennis Ray Diener, Aliona Bogdanova, Thomas Brown, Gaia Pigino
Protocol for precision editing of endogenous Chlamydomonas reinhardtii genes with CRISPR-Cas
STAR Protocols 5(1):102774
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DOI: 10.1016/j.xpro.2023.102774
Dennis Pohle, Fabio A. Barbosa, Filipe M. Ferreira, Stefan Rothe, Juergen W Czarske
Smart few-mode fiber multiplexer using multiplane light conversion
Frontiers in Optics + Laser Science 2023 (FiO, LS)
(Dec 11, 2023)
DOI: 10.1364/fio.2023.fm1c.3
Qian Zhang, Yuan Sui, Stefan Rothe, Jürgen W. Czarske
Learning to demultiplex the superposition of spatial modes in multimode fiber using physics-informed deep learning
Frontiers in Optics + Laser Science 2023 (FiO, LS)
(Dec 11, 2023)
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Tommaso Bianucci, Christoph Zechner
A local polynomial moment approximation for compartmentalized biochemical systems
Math Biosci 367:109110
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Xavier Trepat, Ricard Alert
How to bridge the gap between theory and experiments in biological physics
Nat. Phys. 19(12):1738–1739
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Lars Büttner, Zeyu Gao, Ping Yang, Clemens Bilsing, Jürgen Czarske
Distortion Correction for Imaging Using a Wavefront Sensing Based Multiple-Input Deep Neural Network
Optica Imaging Congress (3D, COSI, DH, FLatOptics, IS, pcAOP)
(Nov 29, 2023)
DOI: 10.1364/cosi.2023.ctu3b.4
Elias Scharf, Ronja Stephan, Kinga Zolnacz, Michael Steinke, Robert Kuschmierz, Juergen Czarske
Lensless Single-Shot Endoscopy with Needle-Thin Multicore Fiber Bundles enabled by 2PP 3D Printing on the Fiber Tip
Optica Imaging Congress (3D, COSI, DH, FLatOptics, IS, pcAOP)
(Nov 29, 2023)
DOI: 10.1364/isa.2023.im3e.2
Josefine Metzkes-Ng, Florian-Emanuel Brack, Florian Kroll, Constantin Bernert, Stefan Bock, Elisabeth Bodenstein, Michael Brand, Thomas E. Cowan, René Gebhardt, Stefan Hans, Uwe Helbig, Felix Horst, Jeannette Jansen, Stephan D. Kraft, Mechthild Krause, Elisabeth Leßmann, Steffen Löck, Jörg Pawelke, Thomas Püschel, Marvin Reimold, Martin Rehwald, Christian Richter, Hans-Peter Schlenvoigt, Ulrich Schramm, Michael Schürer, Joao Seco, Emília Rita Szabó, Marvin E. P. Umlandt, Karl Zeil, Tim Ziegler, Elke Beyreuther
The DRESDEN PLATFORM is a research hub for ultra-high dose rate radiobiology
Sci Rep 13(1):20611
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DOI: 10.1038/s41598-023-46873-8
Joseph L. Watson, Estere Seinkmane, Christine T. Styles, Andrei Mihut, Lara K. Krüger, Kerrie E. McNally, Vicente Jose Planelles-Herrero, Michal Dudek, Patrick M. McCall, Silvia Barbiero, Michael Vanden Oever, Sew Yeu Peak-Chew, Benjamin T. Porebski, Aiwei Zeng, Nina M. Rzechorzek, David C. S. Wong, Andrew D. Beale, Alessandra Stangherlin, Margot Riggi, Janet Iwasa, Jörg Morf, Christos Miliotis, Alina Guna, Alison J. Inglis, Jan Brugués, Rebecca M. Voorhees, Joseph E. Chambers, Qing-Jun Meng, John S. O’Neill, Rachel S. Edgar, Emmanuel Derivery
Macromolecular condensation buffers intracellular water potential
Nature 623, 842–852
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DOI: 10.1038/s41586-023-06626-z
Massimo Mancone, Aldo J. Vázquez Mézquita, Lucia Ilaria Birtolo, Pal Maurovich-Horvat, Klaus F. Kofoed, Theodora Benedek, Patrick Donnelly, Jose Rodriguez-Palomares, Andrejs Erglis, Cyril Štěchovský, Gintare Šakalytė, Nada Čemerlić Ađić, Matthias Gutberlet, Ignacio Diez, Gershan Davis, Elke Zimmermann, Cezary Kępka, Radosav Vidakovic, Marco Francone, Małgorzata Ilnicka-Suckiel, Fabian Plank, Juhanni Knuuti, Rita Faria, Stephen Schröder, Colin Berry, Luca Saba, Balazs Ruzsics, Nina Rieckmann, Christine Kubiak, Kristian Schultz Hansen, Jaqueline Müller-Nordhorn, Bela Merkely, Per E. Sigvardsen, Imre Benedek, Clare Orr, Filipa Xavier Valente, Ligita Zvaigzne, Vojtěch Suchánek, Antanas Jankauskas, Filip Ađić, Michael Woinke, Stephen Keane, Ignacio Lecumberri, Erica Thwaite, Mariusz Kruk, Vladimir Jovanovic, Donata Kuśmierz, Gudren Feuchtner, Mikko Pietilä, Vasco Gama Ribeiro, Tanja Drosch, Christian Delles, Vitanio Palmisano, Michael Fisher, Zsófia D. Drobni, Charlotte Kragelund, Rosca Aurelian, Stephanie Kelly, Bruno Garcia del Blanco, Ainhoa Rubio, Melinda Boussoussou, Jens D. Hove, Ioana Rodean, Susan Regan, Hug Cuéllar Calabria, Dávid Becker, Linnea Larsen, Roxana Hodas, Adriane E. Napp, Robert Haase, Sarah Feger, Mahmoud Mohamed, Konrad Neumann, Henryk Dreger, Matthias Rief, Viktoria Wieske, Pamela S. Douglas, Melanie Estrella, Maria Bosserdt, Peter Martus, Lina M. Serna-Higuita, Jonathan D. Dodd, Marc Dewey
Impact of smoking in patients with suspected coronary artery disease in the randomised DISCHARGE trial
Eur Radiol 34(6):4127–4141
(Nov 22, 2023)
DOI: 10.1007/s00330-023-10355-2
Laura Celotto, Fabian Rost, Anja Machate, Juliane Bläsche, Andreas Dahl, Anke Weber, Stefan Hans, Michael Brand
Single-cell RNA sequencing unravels the transcriptional network underlying zebrafish retina regeneration
eLife 12:RP86507
(Nov 21, 2023)
DOI: 10.7554/eLife.86507.3
Ashwin I. D’Souza, Rahul Grover, Gina A. Monzon, Ludger Santen, Stefan Diez
Vesicles driven by dynein and kinesin exhibit directional reversals without regulators
Nat Commun 14, 7532
(Nov 20, 2023)
DOI: 10.1038/s41467-023-42605-8
Qinghao Yu, Hannah E Walters, Giovanni Pasquini, Sumeet Pal Singh, Martina Lachnit, Catarina R Oliveira, Daniel León-Periñán, Andreas Petzold, Preethi Kesavan, Cristina Subiran Adrados, Ines Garteizgogeascoa, Dunja Knapp, Anne Wagner, Andrea Bernardos, María Alfonso, Gayathri Nadar, Alwin M Graf, Konstantin E Troyanovskiy, Andreas Dahl, Volker Busskamp, Ramón Martínez-Máñez, Maximina H Yun
Cellular senescence promotes progenitor cell expansion during axolotl limb regeneration
Dev Cell 58(22):2416-2427.e7
(Nov 20, 2023)
DOI: 10.1016/j.devcel.2023.09.009
Lucas Woltmann, Jonas Deepe, Claudio Hartmann, Wolfgang Lehner
evalPM: a framework for evaluating machine learning models for particulate matter prediction
Environ Monit Assess 195(12), 1491
(Nov 18, 2023)
DOI: 10.1007/s10661-023-11996-y
Archit Bhatnagar, Michael Nestler, Peter Gross, Mirna Kramar, Mark Leaver, Axel Voigt, Stephan W. Grill
Axis convergence in C. elegans embryos
Current Biology 33, 1–13
(Nov 17, 2023)
DOI: 10.1016/j.cub.2023.10.050
Zehua Dou, Laura Tropf, Harry Hoster, Hagen Schmidt, Juergen Czarske, David Weik
Advanced Ultrasonic Diagnostic Technology Towards Green Hydrogen Energy Systems
2023 IEEE International Ultrasonics Symposium (IUS)
(Nov 7, 2023)
DOI: 10.1109/ius51837.2023.10307141
Lukas Theo Schmitt, Aksana Schneider, Jonas Posorski, Felix Lansing, Milica Jelicic, Manavi Jain, Shady Sayed, Frank Buchholz, Duran Sürün
Quantification of evolved DNA-editing enzymes at scale with DEQSeq
Genome Biol 24(1), 254
(Nov 6, 2023)
DOI: 10.1186/s13059-023-03097-3
Mengfei Gao, Dishi Wang, Michaela Wilsch‐Bräuninger, Weihua Leng, Jonathan Schulte, Nina Morgner, Dietmar Appelhans, T‐Y. Dora Tang
Cell Free Expression in Proteinosomes Prepared from Native Protein‐PNIPAAm Conjugates
Macromolecular Bioscience 24(3)
(Nov 5, 2023)
DOI: 10.1002/mabi.202300464
Zehua Dou, Bowen Fang, Laura Tropf, Harry Hoster, Hagen Schmidt, Jürgen Czarske, David Weik
A Water Monitoring System for Proton Exchange Membrane Fuel Cells Based on Ultrasonic Lamb Waves: An Ex Situ Proof of Concept
IEEE Trans. Instrum. Meas. 72:1–12
(Nov 3, 2023)
DOI: 10.1109/tim.2023.3329101
Mansi Gupta, Thomas Kurth, Fabian Heinemann, Petra Schwille, Sebastian Keil, Franziska Knopf, Michael Brand
Fine-tuning of Fgf8 morphogen gradient by heparan sulfate proteoglycans in the extracellular matrix
bioRxiv 2023.11.02.565243
(Nov 2, 2023)
DOI: 10.1101/2023.11.02.565243
Antoine Vian, Marie Pochitaloff, Shuo-Ting Yen, Sangwoo Kim, Jennifer Pollock, Yucen Liu, Ellen M. Sletten, Otger Campàs
In situ quantification of osmotic pressure within living embryonic tissues
Nat Commun 14(1), 7023
(Nov 2, 2023)
DOI: 10.1038/s41467-023-42024-9
Aboutaleb Amiri, Charlie Duclut, Frank Jülicher, Marko Popović
Random Traction Yielding Transition in Epithelial Tissues
Phys. Rev. Lett. 131, 188401
(Oct 30, 2023)
DOI: 10.1103/PhysRevLett.131.188401
Max Korn, Julián Méndez, Sascha Klüppelholz, Ricardo Langner, Christel Baier, Raimund Dachselt
PMC-VIS: An Interactive Visualization Tool for Probabilistic Model Checking
Lecture Notes in Computer Science 361–375
(Oct 30, 2023)
DOI: 10.1007/978-3-031-47115-5_20
Zheng Shen, Daxiao Sun, Adriana Savastano, Sára Joana Varga, Maria-Sol Cima-Omori, Stefan Becker, Alf Honigmann, Markus Zweckstetter
Multivalent Tau/PSD-95 interactions arrest in vitro condensates and clusters mimicking the postsynaptic density
Nat Commun 14(1), 6839
(Oct 27, 2023)
DOI: 10.1038/s41467-023-42295-2
Dennis Schifferl, Manuela Scholze-Wittler, Alba Villaronga Luque, Milena Pustet, Lars Wittler, Jesse V. Veenvliet, Frederic Koch, Bernhard G. Herrmann
Genome-wide identification of notochord enhancers comprising the regulatory landscape of the brachyury locus in mouse
Development 150(22)
(Oct 26, 2023)
DOI: 10.1242/dev.202111
Cheng-Wu Li, Holger Merlitz, Jens-Uwe Sommer
Scaling Behaviors of Nanoparticle Clusters That Are Driven through Brush-Decorated Nanopores
Macromolecules 56(21):8710–8720
(Oct 25, 2023)
DOI: 10.1021/acs.macromol.3c01762
Shivraj B. Kotkar, Michael P. Howard, Arash Nikoubashman, Jacinta C. Conrad, Ryan Poling-Skutvik, Jeremy C. Palmer
Confined Dynamics in Spherical Polymer Brushes
ACS Macro Lett. 12(11):1503–1509
(Oct 25, 2023)
DOI: 10.1021/acsmacrolett.3c00505
Elisabeth Knust
Der Crumbs-Komplex – von Epithelpolarität zu retinaler Degeneration
Biospektrum 29(6):574–577
(Oct 19, 2023)
DOI: 10.1007/s12268-023-2038-0
Ashley T. Sendell-Price, Frank J. Tulenko, Mats Pettersson, Du Kang, Margo Montandon, Sylke Winkler, Kathleen Kulb, Gavin P. Naylor, Adam Phillippy, Olivier Fedrigo, Jacquelyn Mountcastle, Jennifer R. Balacco, Amalia Dutra, Rebecca E. Dale, Bettina Haase, Erich D. Jarvis, Gene Myers, Shawn M. Burgess, Peter D. Currie, Leif Andersson, Manfred Schartl
Low mutation rate in epaulette sharks is consistent with a slow rate of evolution in sharks
Nat Commun 14(1), 6628
(Oct 19, 2023)
DOI: 10.1038/s41467-023-42238-x
Jiahui Wang, Dinesh Sundaravadivelu Devarajan, Arash Nikoubashman, Jeetain Mittal
Conformational Properties of Polymers at Droplet Interfaces as Model Systems for Disordered Proteins
ACS Macro Letters, Vol 12/Issue 11
(Oct 19, 2023)
DOI: 10.1021/acsmacrolett.3c00456
Nils Kröger, Marc Gentzel
Wie man ein Glashaus baut: die außergewöhnlichen Proteine der Kieselalgen
Biospektrum 29, 621–624
(Oct 19, 2023)
DOI: 10.1007/s12268-023-2031-7
Tom Glosemeyer, Julian Lich, Robert Kuschmierz, Jürgen Czarske
Diffuser-based fiber endoscopy for single-shot 3D fluorescence imaging
EPJ Web Conf. 287:03013
(Oct 18, 2023)
DOI: 10.1051/epjconf/202328703013
Cassie L. Kemmler, Jana Smolikova, Hannah R. Moran, Brandon J. Mannion, Dunja Knapp, Fabian Lim, Anna Czarkwiani, Viviana Hermosilla Aguayo, Vincent Rapp, Olivia E. Fitch, Seraina Bötschi, Licia Selleri, Emma Farley, Ingo Braasch, Maximina Yun, Axel Visel, Marco Osterwalder, Christian Mosimann, Zbynek Kozmik, Alexa Burger
Conserved enhancers control notochord expression of vertebrate Brachyury
Nat Commun 14(1):6594
(Oct 18, 2023)
DOI: 10.1038/s41467-023-42151-3
Alexander M. Bergmann, Jonathan Bauermann, Giacomo Bartolucci, Carsten Donau, Michele Stasi, Anna-Lena Holtmannspötter, Frank Jülicher, Christoph A. Weber, Job Boekhoven
Liquid spherical shells are a non-equilibrium steady state of active droplets
Nat Commun 14(1), 6552
(Oct 17, 2023)
DOI: 10.1038/s41467-023-42344-w
Andreas Hartmann, Koushik Sreenivasa, Mathias Schenkel, Neharika Chamachi, Philipp Schake, Georg Krainer, Michael Schlierf
An automated single-molecule FRET platform for high-content, multiwell plate screening of biomolecular conformations and dynamics
Nat Commun 14, 6511
(Oct 16, 2023)
DOI: 10.1038/s41467-023-42232-3
Mahmoud Mohamed, Maria Bosserdt, Viktoria Wieske, Benjamin Dubourg, Hatem Alkadhi, Mario J. Garcia, Sebastian Leschka, Elke Zimmermann, Abbas A. Shabestari, Bjarne L. Nørgaard, Matthijs F. L. Meijs, Kristian A. Øvrehus, Axel C. P. Diederichsen, Juhani Knuuti, Bjørn A. Halvorsen, Vladymir Mendoza-Rodriguez, Yung-Liang Wan, Nuno Bettencourt, Eugenio Martuscelli, Ronny R. Buechel, Hans Mickley, Kai Sun, Simone Muraglia, Philipp A. Kaufmann, Bernhard A. Herzog, Jean-Claude Tardif, Georg M. Schütz, Michael Laule, David E. Newby, Stephan Achenbach, Matthew Budoff, Robert Haase, Federico Biavati, Aldo Vásquez Mézquita, Peter Schlattmann, Marc Dewey
Combination of computed tomography angiography with coronary artery calcium score for improved diagnosis of coronary artery disease: a collaborative meta-analysis of stable chest pain patients referred for invasive coronary angiography
Eur Radiol 34(4):2426–2436
(Oct 13, 2023)
DOI: 10.1007/s00330-023-10223-z
Ping Liu, Nils Schumann, Fabian Abele, Fazheng Ren, Marcel Hanke, Yang Xin, Andreas Hartmann, Michael Schlierf, Adrian Keller, Weilin Lin*, Yixin Zhang*
Thermophoretic Analysis of Biomolecules across the Nanoscales in Self-Assembled Polymeric Matrices
ACS Appl. Nano Mater
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* corresponding authors
DOI: 10.1021/acsanm.3c03623
Andreas Geyer, Johannes Pietrzyk, Alexander Krause, Dirk Habich, Wolfgang Lehner, Christian Färber, Thomas Willhalm
Near to Far: An Evaluation of Disaggregated Memory for In-Memory Data Processing
Proceedings of the 1st Workshop on Disruptive Memory Systems
(Oct 10, 2023)
DOI: 10.1145/3609308.3625271
Qian Zhang, Yuan Sui, Dennis Pohle, Nektarios Koukourakis, Jürgen W. Czarske, Stefan Rothe
Reference-less phase retrieval of multimode fibers using a deep neural network
Emerging Topics in Artificial Intelligence (ETAI) 2023
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2021
234 publication(s) listed
Frederic Carsten Schmeel, Asadeh Lakghomi, Nils Christian Lehnen, Robert Haase, Mohammed Banat, Johannes Wach, Nikolaus Handke, Hartmut Vatter, Alexander Radbruch, Ulrike Attenberger, Julian Alexander Luetkens
Proton Density Fat Fraction Spine MRI for Differentiation of Erosive Vertebral Endplate Degeneration and Infectious Spondylitis
Diagnostics 12(1):78
(Dec 31, 2021)
DOI: 10.3390/diagnostics12010078
Sara Vanessa Bernhard, Katarzyna Seget-Trzensiok, Christian Kuffer, Dragomir B. Krastev, Lisa-Marie Stautmeister, Mirko Theis, Kristina Keuper, Jan-Eric Boekenkamp, Maik Kschischo, Frank Buchholz, Zuzana Storchova
Loss of USP28 and SPINT2 expression promotes cancer cell survival after whole genome doubling
Cell Oncol. 45(1):103–119
(Dec 28, 2021)
DOI: 10.1007/s13402-021-00654-5
Sadra Bakhshandeh, Carsten Werner, Peter Fratzl, Amaia Cipitria
Microenvironment-mediated cancer dormancy: Insights from metastability theory
Proc. Natl. Acad. Sci. U.S.A. 119(1)
(Dec 23, 2021)
DOI: 10.1073/pnas.2111046118
Lucas Woltmann, Peter Volk, Michael Dinzinger, Lukas Gräf, Sebastian Strasser, Johannes Schildgen, Claudio Hartmann, Wolfgang Lehner
Data Science Meets High-Tech Manufacturing – The BTW 2021 Data Science Challenge
Datenbank Spektrum 22(1):5–10
(Dec 21, 2021)
DOI: 10.1007/s13222-021-00398-4
Jesse V. Veenvliet, Pierre-François Lenne, David A. Turner, Iftach Nachman, Vikas Trivedi
Sculpting with stem cells: how models of embryo development take shape
Development 148 (24): dev192914
(Dec 15, 2021)
DOI: 10.1242/dev.192914
Karl B. Hoffmann, Ivo F. Sbalzarini
Estimation of unordered core size using a robustness measure for topological defects in discretized orientation and vector fields
Proc. Appl. Math. Mech., 21(1): e202100105
(Dec 14, 2021)
DOI: 10.1002/pamm.202100105
Juliane Valtin, Stephan Behrens, Manfred F. Maitz, Florian Schmieder, Frank Sonntag, Carsten Werner
A modular in vitro flow model to analyse blood-surface interactions under physiological conditions
Current Directions in Biomedical Engineering 7(2):171–174
(Dec 10, 2021)
DOI: 10.1515/cdbme-2021-2044
Robert Kuschmierz, Elias Scharf, David F. Ortegón-González, Tom Glosemeyer, Jürgen W. Czarske
Ultra-thin 3D lensless fiber endoscopy using diffractive optical elements and deep neural networks
Light: Advanced Manufacturing 2, Article number: 30
(Dec 6, 2021)
DOI: 10.37188/lam.2021.030
Yuhan Wang, Mark Eddison, Greg Fleishman, Martin Weigert, Shengjin Xu, Tim Wang, Konrad Rokicki, Cristian Goina, Fredrick E. Henry, Andrew L. Lemire, Uwe Schmidt, Hui Yang, Karel Svoboda, Eugene W. Myers, Stephan Saalfeld, Wyatt Korff, Scott M. Sternson, Paul W. Tillberg
EASI-FISH for thick tissue defines lateral hypothalamus spatio-molecular organization
Cell 184(26):6361–6377.e24
(Dec 6, 2021)
DOI: 10.1016/j.cell.2021.11.024
Alan Ianeselli, Damla Tetiker, Julian Stein, Alexandra Kühnlein, Christof B. Mast, Dieter Braun, T.-Y. Dora Tang
Non-equilibrium conditions inside rock pores drive fission, maintenance and selection of coacervate protocells
Nat. Chem. 14(1):32–39
(Dec 6, 2021)
DOI: 10.1038/s41557-021-00830-y
Fabio Schittler Neves, Marc Timme
Decoding complex state space trajectories for neural computing
Chaos: An Interdisciplinary Journal of Nonlinear Science 31(12)
(Dec 6, 2021)
DOI: 10.1063/5.0053429
Jenna Hoersten, Gloria Ruiz-Gómez, Felix Lansing, Teresa Rojo-Romanos, Lukas Theo Schmitt, Jan Sonntag, M Teresa Pisabarro, Frank Buchholz
Pairing of single mutations yields obligate Cre-type site-specific recombinases
Nucleic Acids Research 50(2):1174–1186
(Dec 6, 2021)
DOI: 10.1093/nar/gkab1240
Ingo Nitschke, Axel Voigt
Observer-invariant time derivatives on moving surfaces
Journal of Geometry and Physics 173:104428
(Dec 3, 2021)
DOI: 10.1016/j.geomphys.2021.104428
Neha Goveas, Claudia Waskow, Kathrin Arndt, Julian Heuberger, Qinyu Zhang, Dimitra Alexopoulou, Andreas Dahl, Walter Birchmeier, Konstantinos Anastassiadis, A. Francis Stewart, Andrea Kranz
MLL1 is required for maintenance of intestinal stem cells
PLoS Genet 17(12):e1009250
(Dec 3, 2021)
DOI: 10.1371/journal.pgen.1009250
Cordula Reuther, Sönke Steenhusen, Christoph Robert Meinecke, Pradheebha Surendiran, Aseem Salhotra, Frida W Lindberg, Alf Månsson, Heiner Linke, Stefan Diez
Molecular motor-driven filament transport across three-dimensional, polymeric micro-junctions
New J. Phys. 23, 125002
(Dec 2, 2021)
DOI: 10.1088/1367-2630/ac39b4
Stefano Bo, Lars Hubatsch, Jonathan Bauermann, Christoph A. Weber, Frank Jülicher
Stochastic dynamics of single molecules across phase boundaries
Phys. Rev. Research 3, 043150,
(Dec 2, 2021)
DOI: 10.1103/PhysRevResearch.3.043150
Xueping Zhao, Giacomo Bartolucci, Alf Honigmann, Frank Jülicher, Christoph A Weber
Thermodynamics of Wetting, Prewetting and Surface Phase Transitions with Surface Binding
New J. Phys. 23, 123003,
(Dec 1, 2021)
DOI: 10.1088/1367-2630/ac320b
Dennis Schifferl, Manuela Scholze-Wittler, Lars Wittler, Jesse V. Veenvliet, Frederic Koch, Bernhard G. Herrmann
A 37 kb region upstream of brachyury comprising a notochord enhancer is essential for notochord and tail development
Development 148(23)
(Nov 25, 2021)
DOI: 10.1242/dev.200059
D. Wenzel and A. Voigt
Multiphase field models for collective cell migration
Phys. Rev. E 104, 054410
(Nov 24, 2021)
DOI: 10.1103/PhysRevE.104.054410
Alexandra Michurina, M Sadman Sakib, Cemil Kerimoglu, Dennis Manfred Krüger, Lalit Kaurani, Md Rezaul Islam, Parth Devesh Joshi, Sophie Schröder, Tonatiuh Pena Centeno, Jiayin Zhou, Ranjit Pradhan, Julia Cha, Xingbo Xu, Gregor Eichele, Elisabeth M Zeisberg, Andrea Kranz, A Francis Stewart, André Fischer
Postnatal expression of the lysine methyltransferase SETD1B is essential for learning and the regulation of neuron‐enriched genes
The EMBO Journal 41(1)
(Nov 22, 2021)
DOI: 10.15252/embj.2020106459
Nesrine Khouzami, Friedrich Michel, Pietro Incardona, Jeronimo Castrillon, Ivo F. Sbalzarini
Model-based autotuning of discretization methods in numerical simulations of partial differential equations
Journal of Computational Science 57:101489
(Nov 20, 2021)
DOI: 10.1016/j.jocs.2021.101489
Robert Haase
Image Processing Filters for Grids of Cells Analogous to Filters Processing Grids of Pixels
Front. Comput. Sci. 3
(Nov 19, 2021)
DOI: 10.3389/fcomp.2021.774396
Fabio S Neves, Marc Timme
Bio-inspired computing by nonlinear network dynamics—a brief introduction
J. Phys. Complex. 2(4):045019
(Nov 17, 2021)
DOI: 10.1088/2632-072x/ac3ad4
Yukako Oda, Chisato Takahashi, Shota Harada, Shun Nakamura, Daxiao Sun, Kazumi Kiso, Yuko Urata, Hitoshi Miyachi, Yoshinori Fujiyoshi, Alf Honigmann, Seiichi Uchida, Yasushi Ishihama, Fumiko Toyoshima
Discovery of anti-inflammatory physiological peptides that promote tissue repair by reinforcing epithelial barrier formation
Sci. Adv. 7(47)
(Nov 17, 2021)
DOI: 10.1126/sciadv.abj6895
Chloé Roffay, Guillaume Molinard, Kyoohyun Kim, Marta Urbanska, Virginia Andrade, Victoria Barbarasa, Paulina Nowak, Vincent Mercier, José García-Calvo, Stefan Matile, Robbie Loewith, Arnaud Echard, Jochen Guck, Martin Lenz, Aurélien Roux
Passive coupling of membrane tension and cell volume during active response of cells to osmosis
Proc. Natl. Acad. Sci. U.S.A. 118(47)
(Nov 16, 2021)
DOI: 10.1073/pnas.2103228118
Byung Ho Lee, Irene Seijo-Barandiaran, Anne Grapin-Botton
Epithelial morphogenesis in organoids
Current Opinion in Genetics & Development 72:30–37
(Nov 15, 2021)
DOI: 10.1016/j.gde.2021.10.001
David Weik, Richard Nauber, Lars Buttner, Jurgen Czarske, Dirk Rabiger, Sanjay Singh, Tobias Vogt, Sven Eckert
Ultrasound Image Velocimetry with Adaptive Beamforming for Modal Measurements in Liquid Metal Convection
2021 IEEE International Ultrasonics Symposium (IUS)
(Nov 13, 2021)
DOI: 10.1109/ius52206.2021.9593429
Dalileh Nabi, Hauke Drechsler, Johannes Pschirer, Franz Korn, Nadine Schuler, Stefan Diez, Rolf Jessberger, Mariola Chacón
CENP-V is required for proper chromosome segregation through interaction with spindle microtubules in mouse oocytes
Nat Commun 12, 6547
(Nov 11, 2021)
DOI: 10.1038/s41467-021-26826-3
Johannes Girstmair, HongKee Moon, Charlène Brillard, Robert Haase, Pavel Tomancak
Time to Upgrade: A New OpenSPIM Guide to Build and Operate Advanced OpenSPIM Configurations
Advanced Biology 6(4)
(Nov 11, 2021)
DOI: 10.1002/adbi.202101182
Judit Clopés, Jaeoh Shin, Marcus Jahnel, Stephan W. Grill, Vasily Zaburdaev
Thermal fluctuations assist mechanical signal propagation in coiled-coil proteins
Phys. Rev. E 104(5), 054403
(Nov 11, 2021)
DOI: 10.1103/physreve.104.054403
Safak Chasan, Eliane Hesse, Passant Atallah, Matthias Gerstner, Solvig Diederichs, Astrid Schenker, Kay Grobe, Carsten Werner, Wiltrud Richter
Sulfation of Glycosaminoglycan Hydrogels Instructs Cell Fate and Chondral versus Endochondral Lineage Decision of Skeletal Stem Cells In Vivo
Adv Funct Materials 32(7)
(Nov 6, 2021)
DOI: 10.1002/adfm.202109176
Felix Schmieder, Rouhollah Habibey, Volker Busskamp, Lars Büttner, Jürgen W. Czarske
Analysis of human iPSC-derived neuronal networks (hiPSCNN) using holographic single cell and full field optogenetic stimulation
Biophotonics Congress 2021
(Nov 5, 2021)
DOI: 10.1364/brain.2021.bm1b.4
Vaibhav Mahajan, Timon Beck, Paulina Gregorczyk, André Ruland, Simon Alberti, Jochen Guck, Carsten Werner, Raimund Schlüßler, Anna Verena Taubenberger
Mapping Tumor Spheroid Mechanics in Dependence of 3D Microenvironment Stiffness and Degradability by Brillouin Microscopy
Cancers 13(21):5549
(Nov 5, 2021)
DOI: 10.3390/cancers13215549
Tooba Quidwai, Jiaolong Wang, Emma A Hall, Narcis A Petriman, Weihua Leng, Petra Kiesel, Jonathan N Wells, Laura C Murphy, Margaret A Keighren, Joseph A Marsh, Esben Lorentzen, Gaia Pigino, Pleasantine Mill
A WDR35-dependent coat protein complex transports ciliary membrane cargo vesicles to cilia
eLife 10
(Nov 4, 2021)
DOI: 10.7554/elife.69786
Weizhou Luo, Eva Goebel, Patrick Reipschläger, Mats Ole Ellenberg, Raimund Dachselt
Exploring and Slicing Volumetric Medical Data in Augmented Reality Using a Spatially-Aware Mobile Device
IEEE International Symposium on Mixed and Augmented Reality Adjunct (ISMAR-Adjunct)
(Nov 3, 2021)
DOI: 10.1109/ISMAR-Adjunct54149.2021.00076
Lucas Woltmann, Dominik Olwig, Claudio Hartmann, Dirk Habich, Wolfgang Lehner
PostCENN
Proc. VLDB Endow. 14(12):2715–2718
(Oct 28, 2021)
DOI: 10.14778/3476311.3476327
Iliya D. Stoev, Benjamin Seelbinder, Elena Erben, Nicola Maghelli, Moritz Kreysing
Highly sensitive force measurements in an optically generated, harmonic hydrodynamic trap
eLight, 1, 7
(Oct 23, 2021)
DOI: 10.1186/s43593-021-00007-7
Xue Wang, Wentao Zheng, Haibo Zhou, Qiang Tu, Ya-Jie Tang, A Francis Stewart, Youming Zhang, Xiaoying Bian
Improved dsDNA recombineering enables versatile multiplex genome engineering of kilobase-scale sequences in diverse bacteria
Nucleic Acids Research 50(3):e15–e15
(Oct 22, 2021)
DOI: 10.1093/nar/gkab1076
Cindy D. Beyer, Sugina Thavalingam, Tatiana Guseva, Lisa Schardt, Ralf Zimmermann, Carsten Werner, Pascal Dietze, Julia Elisabeth Bandow, Nils Metzler-Nolte, Axel Rosenhahn
Zwitterionic Peptides Reduce Accumulation of Marine and Freshwater Biofilm Formers
ACS Appl. Mater. Interfaces 13(42):49682–49691
(Oct 20, 2021)
DOI: 10.1021/acsami.1c13459
Robert Wagner, Sabine S. Eckstein, Hajime Yamazaki, Felicia Gerst, Jürgen Machann, Benjamin Assad Jaghutriz, Annette Schürmann, Michele Solimena, Stephan Singer, Alfred Königsrainer, Andreas L. Birkenfeld, Hans-Ulrich Häring, Andreas Fritsche, Susanne Ullrich, Martin Heni
Metabolic implications of pancreatic fat accumulation
Nat Rev Endocrinol 18(1):43–54
(Oct 20, 2021)
DOI: 10.1038/s41574-021-00573-3
M. Sankaranarayanan, Ryan J. Emenecker, Elise L. Wilby, Marcus Jahnel, Irmela R.E.A. Trussina, Matt Wayland, Simon Alberti, Alex S. Holehouse, Timothy T. Weil
Adaptable P body physical states differentially regulate bicoid mRNA storage during early Drosophila development
Developmental Cell 56(20):2886–2901.e6
(Oct 19, 2021)
DOI: 10.1016/j.devcel.2021.09.021
Adrien Sthoer, Ellen M. Adams, Sanghamitra Sengupta, Robert W. Corkery, Heather C. Allen, Eric C. Tyrode
La3+ and Y3+ interactions with the carboxylic acid moiety at the liquid/vapor interface: Identification of binding complexes, charge reversal, and detection limits
Journal of Colloid and Interface Science 608:2169–2180
(Oct 18, 2021)
DOI: 10.1016/j.jcis.2021.10.052
Mrityunjoy Kar, Ammon E. Posey, Furqan Dar, Anthony A. Hyman, Rohit V. Pappu
Glycine-Rich Peptides from FUS Have an Intrinsic Ability to Self-Assemble into Fibers and Networked Fibrils
Biochemistry 60(43):3213–3222
(Oct 16, 2021)
DOI: 10.1021/acs.biochem.1c00501
Eduard Jorswieck, Andrew Lonnstrom, Karl-Ludwig Besser, Stefan Rothe, Juergen W. Czarske
Achievable Physical-Layer Secrecy in Multi-Mode Fiber Channels using Artificial Noise
2021 17th International Symposium on Wireless Communication Systems (ISWCS)
(Oct 15, 2021)
DOI: 10.1109/iswcs49558.2021.9562176
Ana Rodríguez Sánchez-Archidona, Céline Cruciani-Guglielmacci, Clara Roujeau, Leonore Wigger, Justine Lallement, Jessica Denom, Marko Barovic, Nadim Kassis, Florence Mehl, Jurgen Weitz, Marius Distler, Christian Klose, Kai Simons, Mark Ibberson, Michele Solimena, Christophe Magnan, Bernard Thorens
Plasma triacylglycerols are biomarkers of β-cell function in mice and humans
Molecular Metabolism 54:101355
(Oct 12, 2021)
DOI: 10.1016/j.molmet.2021.101355
Lars Kegel, Claudio Hartmann, Maik Thiele, Wolfgang Lehner
Season- and Trend-aware Symbolic Approximation for Accurate and Efficient Time Series Matching
Datenbank Spektrum 21(3):225–236
(Oct 7, 2021)
DOI: 10.1007/s13222-021-00389-5
C. Shan Xu, Song Pang, Gleb Shtengel, Andreas Müller, Alex T. Ritter, Huxley K. Hoffman, Shin-ya Takemura, Zhiyuan Lu, H. Amalia Pasolli, Nirmala Iyer, Jeeyun Chung, Davis Bennett, Aubrey V. Weigel, Melanie Freeman, Schuyler B. van Engelenburg, Tobias C. Walther, Robert V. Farese, Jennifer Lippincott-Schwartz, Ira Mellman, Michele Solimena, Harald F. Hess
An open-access volume electron microscopy atlas of whole cells and tissues
Nature 599(7883):147–151
(Oct 7, 2021)
DOI: 10.1038/s41586-021-03992-4
Sara N. Nagelberg*, Jan F. Totz*, Matthäus Mittasch, Vishnu Sresht, Lukas Zeininger, Timothy M Swager, Moritz Kreysing, Mathias Kolle
Actuation of Janus Emulsion Droplets via Optothermally Induced Marangoni Forces
Phys Rev Lett 127(14):144503
(Oct 1, 2021)
DOI: 10.1103/PhysRevLett.127.144503
Jana Sievers, Ralf Zimmermann, Jens Friedrichs, Dagmar Pette, Yanuar Dwi Putra Limasale, Carsten Werner, Petra Birgit Welzel
Customizing biohybrid cryogels to serve as ready-to-use delivery systems of signaling proteins
Biomaterials 278:121170
(Oct 1, 2021)
DOI: 10.1016/j.biomaterials.2021.121170
Andrea Auconi, Benjamin M. Friedrich, Andrea Giansanti
Fluctuation-response theorem for Kullback-Leibler divergences to quantify causation
EPL 135(2):28002
(Sep 30, 2021)
DOI: 10.1209/0295-5075/135/28002
Zahra Ghezelayagh, Mahsa Zabihi, Ibrahim Zarkesh, Carla A. C. Gonçalves, Michael Larsen, Newsha Hagh-parast, Mohammad Pakzad, Massoud Vosough, Babak Arjmand, Hossein Baharvand, Bagher Larijani, Anne Grapin-Botton, Hamid Reza Aghayan, Yaser Tahamtani
Improved Differentiation of hESC-Derived Pancreatic Progenitors by Using Human Fetal Pancreatic Mesenchymal Cells in a Micro‐scalable Three-Dimensional Co-culture System
Stem Cell Rev and Rep 18(1):360–377
(Sep 29, 2021)
DOI: 10.1007/s12015-021-10266-z
Jingyuan Zhu, Till Korten, Hillel Kugler, Falco van Delft, Alf Månsson, Danny Reuter, Stefan Diez, Heiner Linke
Physical requirements for scaling up network-based biocomputation
New J. Phys. 23(10):105004
(Sep 29, 2021)
DOI: 10.1088/1367-2630/ac2a5d
Stefan Rothe, Philipp Daferner, Sebastian Heide, David Krause, Felix Schmieder, Nektarios Koukourakis, Jürgen W. Czarske
Benchmarking analysis of computer generated holograms for complex wavefront shaping using pixelated phase modulators
Opt. Express 29(23):37602
(Sep 29, 2021)
DOI: 10.1364/oe.434842
Charlie Duclut, Joris Paijmans, Mandar M Inamdar, Carl D. Modes, Frank Jülicher
Nonlinear Rheology of Cellular Networks
Cells and Development, 203746
(Sep 27, 2021)
DOI: 10.1016/j.cdev.2021.203746
Kristian Le Vay, Emilie Yeonwha Song, Basusree Ghosh, T.‐Y. Dora Tang, Hannes Mutschler
Enhanced Ribozyme‐Catalyzed Recombination and Oligonucleotide Assembly in Peptide‐RNA Condensates
Angew Chem Int Ed 60(50):26096–26104
(Sep 27, 2021)
DOI: 10.1002/anie.202109267
B. Duygu Özpolat, Nadine Randel, Elizabeth A. Williams, Luis Alberto Bezares-Calderón, Gabriele Andreatta, Guillaume Balavoine, Paola Y. Bertucci, David E. K. Ferrier, Maria Cristina Gambi, Eve Gazave, Mette Handberg-Thorsager, Jörg Hardege, Cameron Hird, Yu-Wen Hsieh, Jerome Hui, Kevin Nzumbi Mutemi, Stephan Q. Schneider, Oleg Simakov, Hernando M. Vergara, Michel Vervoort, Gáspár Jékely, Kristin Tessmar-Raible, Florian Raible, Detlev Arendt
The Nereid on the rise: Platynereis as a model system
EvoDevo 12(1), 10
(Sep 27, 2021)
DOI: 10.1186/s13227-021-00180-3
Stefan Dannenmaier, Christine Desroches Altamirano, Lisa Schüler, Ying Zhang, Johannes Hummel, Martin Milanov, Silke Oeljeklaus, Hans-Georg Koch, Sabine Rospert, Simon Alberti, Bettina Warscheid
Quantitative proteomics identifies the universally conserved ATPase Ola1p as a positive regulator of heat shock response in Saccharomyces cerevisiae
Journal of Biological Chemistry 297(5):101050
(Sep 24, 2021)
DOI: 10.1016/j.jbc.2021.101050
Abhinav Singh, Pietro Incardona, Ivo F. Sbalzarini
A C++ expression system for partial differential equations enables generic simulations of biological hydrodynamics
Eur. Phys. J. E 44, 117 (2021).
(Sep 23, 2021)
DOI: 10.1140/epje/s10189-021-00121-x
Giovanni Sirio Carmantini, Fabio Schittler Neves, Marc Timme, Serafim Rodrigues
Stochastic facilitation in heteroclinic communication channels
Chaos. 31 (9): 093130.
(Sep 23, 2021)
DOI: 10.1063/5.0054485
Dominik Hahn, Jannick M. Sonntag, Steffen Lück, Manfred F. Maitz, Uwe Freudenberg, Rainer Jordan, Carsten Werner
Poly(2‐alkyl‐2‐oxazoline)‐Heparin Hydrogels—Expanding the Physicochemical Parameter Space of Biohybrid Materials
Adv Healthcare Materials 10(22)
(Sep 20, 2021)
DOI: 10.1002/adhm.202101327
Fabio Novelli, Claudius Hoberg, Ellen M. Adams, J. Michael Klopf, Martina Havenith
Terahertz pump–probe of liquid water at 12.3 THz
Phys. Chem. Chem. Phys. 24(2):653–665
(Sep 17, 2021)
DOI: 10.1039/d1cp03207k
Natalia Gorenkova, Manfred F. Maitz, Georg Böhme, Hani A. Alhadrami, Essam H. Jiffri, John D. Totten, Carsten Werner, Hilary V. O. Carswell, F. Philipp Seib
The innate immune response of self-assembling silk fibroin hydrogels
Biomater. Sci. 9(21):7194–7204
(Sep 15, 2021)
DOI: 10.1039/d1bm00936b
Anatol W. Fritsch, Andrés F. Diaz-Delgadillo, Omar Adame-Arana, Carsten Hoege, Matthäus Mittasch, Moritz Kreysing, Mark Leaver, Anthony A. Hyman, Frank Jülicher, and Christoph A. Weber
Local thermodynamics govern formation and dissolution of Caenorhabditis elegans P granule condensates
PNAS September 14, 2021 118 (37) e2102772118
(Sep 14, 2021)
DOI: 10.1073/pnas.2102772118
Pallavi Subramanian, Sofia Gargani, Alessandra Palladini, Margarita Chatzimike, Michal Grzybek, Mirko Peitzsch, Anastasios D. Papanastasiou, Iryna Pyrina, Vasileios Ntafis, Bettina Gercken, Mathias Lesche, Andreas Petzold, Anupam Sinha, Marina Nati, Veera Raghavan Thangapandi, Ioannis Kourtzelis, Margarita Andreadou, Anke Witt, Andreas Dahl, Ralph Burkhardt, Robert Haase, António Miguel de Jesus Domingues, Ian Henry, Nicola Zamboni, Peter Mirtschink, Kyoung‐Jin Chung, Jochen Hampe, Ünal Coskun, Dimitris L. Kontoyiannis, Triantafyllos Chavakis
The RNA binding protein human antigen R is a gatekeeper of liver homeostasis
Hepatology 75(4):881–897
(Sep 14, 2021)
DOI: 10.1002/hep.32153
Elisabeth Kemter, Andreas Müller, Martin Neukam, Anna Ivanova, Nikolai Klymiuk, Simone Renner, Kaiyuan Yang, Johannes Broichhagen, Mayuko Kurome, Valeri Zakhartchenko, Barbara Kessler, Klaus-Peter Knoch, Marc Bickle, Barbara Ludwig, Kai Johnsson, Heiko Lickert, Thomas Kurth, Eckhard Wolf, Michele Solimena
Sequential in vivo labeling of insulin secretory granule pools inINS-SNAPtransgenic pigs
Proc. Natl. Acad. Sci. U.S.A. 118(37)
(Sep 14, 2021)
DOI: 10.1073/pnas.2107665118
Elena Erben, Benjamin Seelbinder, Iliya D. Stoev, Sergei Klykov, Nicola Maghelli, Moritz Kreysing
Feedback-based positioning and diffusion suppression of particles via optical control of thermoviscous flows
Opt Express, 29(19):30272–30283
(Sep 13, 2021)
DOI: 10.1364/oe.432935
Gonzalo Rosso, Daniel Wehner, Christine Schweitzer, Stephanie Möllmert, Elisabeth Sock, Jochen Guck, Victor Shahin
Matrix stiffness mechanosensing modulates the expression and distribution of transcription factors in Schwann cells
Bioengineering & Transla Med 7(1)
(Sep 13, 2021)
DOI: 10.1002/btm2.10257
Stefano Suzzi, Reiner Ahrendt, Stefan Hans, Svetlana A. Semenova, Avinash Chekuru, Paul Wirsching, Volker Kroehne, Saygın Bilican, Shady Sayed, Sylke Winkler, Sandra Spieß, Anja Machate, Jan Kaslin, Pertti Panula, Michael Brand
Deletion of lrrk2 causes early developmental abnormalities and age-dependent increase of monoamine catabolism in the zebrafish brain
PLoS Genet 17(9):e1009794
(Sep 13, 2021)
DOI: 10.1371/journal.pgen.1009794
Jan-Christoph Simon, Carsten Werner
12 years more than just skin and bones: the CRC Transregio 67
Biological Chemistry 402(11):1269–1270
(Sep 11, 2021)
DOI: 10.1515/hsz-2021-0353
Tobias Pietzsch, Lorenzo Duso, Christoph Zechner
Compartor: a toolbox for the automatic generation of moment equations for dynamic compartment populations
Bioinformatics 37(17):2782–2784
(Sep 9, 2021)
DOI: 10.1093/bioinformatics/btab058
Gokul Kesavan, Anja Machate, Michael Brand
CRISPR/Cas9-Based Split Fluorescent Protein Tagging
Zebrafish 18(6):369–373
(Sep 8, 2021)
DOI: 10.1089/zeb.2021.0031
Matthias Joppa, Mike Bermuske, Frank Rüdiger, Lars Büttner, Jochen Fröhlich, Juergen W. Czarske
Measurement and Numerical Simulation of the Velocity Profile in the Thin Film of an Impinging Water Jet
Journal of Fluids Engineering 144(3)
(Sep 6, 2021)
DOI: 10.1115/1.4052361
Songlei Liu, Johannes Striebel, Giovanni Pasquini, Alex H. M. Ng, Parastoo Khoshakhlagh, George M. Church, Volker Busskamp
Neuronal Cell-type Engineering by Transcriptional Activation
Front. Genome Ed. 3
(Sep 3, 2021)
DOI: 10.3389/fgeed.2021.715697
Lange S, Friedrich BM
Network permeability changes according to a quadratic power law upon removal of a single edge
EPL, 134 (2021) 64002
(Sep 2, 2021)
DOI: 10.1209/0295-5075/134/64002
Lars Grüter, Richard Nauber, Jürgen Czarske
Non-invasive aberration correction and adaptive ultrasound imaging with a time reversal virtual array
tm - Technisches Messen 88(s1):s34–s36
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Eng, Nikolai Engedal, Anna-Mart Engelbrecht, Agnete S.T. Engelsen, Jorrit M. Enserink, Ricardo Escalante, Audrey Esclatine, Mafalda Escobar-Henriques, Eeva-Liisa Eskelinen, Lucile Espert, Makandjou-Ola Eusebio, Gemma Fabrias, Cinzia Fabrizi, Antonio Facchiano, Francesco Facchiano, Bengt Fadeel, Claudio Fader, Alex C. Faesen, W. Douglas Fairlie, Alberto Falcó, Bjorn H. Falkenburger, Daping Fan, Jie Fan, Yanbo Fan, Evandro F. Fang, Yanshan Fang, Yognqi Fang, Manolis Fanto, Tamar Farfel-Becker, Mathias Faure, Gholamreza Fazeli, Anthony O. Fedele, Arthur M. Feldman, Du Feng, Jiachun Feng, Lifeng Feng, Yibin Feng, Yuchen Feng, Wei Feng, Thais Fenz Araujo, Thomas A. Ferguson, Álvaro F. Fernández, Jose C. Fernandez-Checa, Sonia Fernández-Veledo, Alisdair R. Fernie, Anthony W. Ferrante, Alessandra Ferraresi, Merari F. Ferrari, Julio C.B. Ferreira, Susan Ferro-Novick, Antonio Figueras, Riccardo Filadi, Nicoletta Filigheddu, Eduardo Filippi-Chiela, Giuseppe Filomeni, Gian Maria Fimia, Vittorio Fineschi, Francesca Finetti, Steven Finkbeiner, Edward A. Fisher, Paul B. Fisher, Flavio Flamigni, Steven J. Fliesler, Trude H. Flo, Ida Florance, Oliver Florey, Tullio Florio, Erika Fodor, Carlo Follo, Edward A. Fon, Antonella Forlino, Francesco Fornai, Paola Fortini, Anna Fracassi, Alessandro Fraldi, Brunella Franco, Rodrigo Franco, Flavia Franconi, Lisa B. Frankel, Scott L. Friedman, Leopold F. Fröhlich, Gema Frühbeck, Jose M. Fuentes, Yukio Fujiki, Naonobu Fujita, Yuuki Fujiwara, Mitsunori Fukuda, Simone Fulda, Luc Furic, Norihiko Furuya, Carmela Fusco, Michaela U. Gack, Lidia Gaffke, Sehamuddin Galadari, Alessia Galasso, Maria F. Galindo, Sachith Gallolu Kankanamalage, Lorenzo Galluzzi, Vincent Galy, Noor Gammoh, Boyi Gan, Ian G. Ganley, Feng Gao, Hui Gao, Minghui Gao, Ping Gao, Shou-Jiang Gao, Wentao Gao, Xiaobo Gao, Ana Garcera, Maria Noé Garcia, Verónica E. Garcia, Francisco García-Del Portillo, Vega Garcia-Escudero, Aracely Garcia-Garcia, Marina Garcia-Macia, Diana García-Moreno, Carmen Garcia-Ruiz, Patricia García-Sanz, Abhishek D. Garg, Ricardo Gargini, Tina Garofalo, Robert F. Garry, Nils C. Gassen, Damian Gatica, Liang Ge, Wanzhong Ge, Ruth Geiss-Friedlander, Cecilia Gelfi, Pascal Genschik, Ian E. Gentle, Valeria Gerbino, Christoph Gerhardt, Kyla Germain, Marc Germain, David A. Gewirtz, Elham Ghasemipour Afshar, Saeid Ghavami, Alessandra Ghigo, Manosij Ghosh, Georgios Giamas, Claudia Giampietri, Alexandra Giatromanolaki, Gary E. Gibson, Spencer B. Gibson, Vanessa Ginet, Edward Giniger, Carlotta Giorgi, Henrique Girao, Stephen E. Girardin, Mridhula Giridharan, Sandy Giuliano, Cecilia Giulivi, Sylvie Giuriato, Julien Giustiniani, Alexander Gluschko, Veit Goder, Alexander Goginashvili, Jakub Golab, David C. Goldstone, Anna Golebiewska, Luciana R. Gomes, Rodrigo Gomez, Rubén Gómez-Sánchez, Maria Catalina Gomez-Puerto, Raquel Gomez-Sintes, Qingqiu Gong, Felix M. Goni, Javier González-Gallego, Tomas Gonzalez-Hernandez, Rosa A. Gonzalez-Polo, Jose A. Gonzalez-Reyes, Patricia González-Rodríguez, Ing Swie Goping, Marina S. Gorbatyuk, Nikolai V. Gorbunov, Kıvanç Görgülü, Roxana M. Gorojod, Sharon M. Gorski, Sandro Goruppi, Cecilia Gotor, Roberta A. Gottlieb, Illana Gozes, Devrim Gozuacik, Martin Graef, Markus H. Gräler, Veronica Granatiero, Daniel Grasso, Joshua P. Gray, Douglas R. Green, Alexander Greenhough, Stephen L. Gregory, Edward F. Griffin, Mark W. Grinstaff, Frederic Gros, Charles Grose, Angelina S. Gross, Florian Gruber, Paolo Grumati, Tilman Grune, Xueyan Gu, Jun-Lin Guan, Carlos M. Guardia, Kishore Guda, Flora Guerra, Consuelo Guerri, Prasun Guha, Carlos Guillén, Shashi Gujar, Anna Gukovskaya, Ilya Gukovsky, Jan Gunst, Andreas Günther, Anyonya R. Guntur, Chuanyong Guo, Chun Guo, Hongqing Guo, Lian-Wang Guo, Ming Guo, Pawan Gupta, Shashi Kumar Gupta, Swapnil Gupta, Veer Bala Gupta, Vivek Gupta, Asa B. Gustafsson, David D. Gutterman, Ranjitha H.B., Annakaisa Haapasalo, James E. Haber, Aleksandra Hać, Shinji Hadano, Anders J. Hafrén, Mansour Haidar, Belinda S. Hall, Gunnel Halldén, Anne Hamacher-Brady, Andrea Hamann, Maho Hamasaki, Weidong Han, Malene Hansen, Phyllis I. Hanson, Zijian Hao, Masaru Harada, Ljubica Harhaji-Trajkovic, Nirmala Hariharan, Nigil Haroon, James Harris, Takafumi Hasegawa, Noor Hasima Nagoor, Jeffrey A. Haspel, Volker Haucke, Wayne D. Hawkins, Bruce A. Hay, Cole M. Haynes, Soren B. Hayrabedyan, Thomas S. Hays, Congcong He, Qin He, Rong-Rong He, You-Wen He, Yu-Ying He, Yasser Heakal, Alexander M. Heberle, J. Fielding Hejtmancik, Gudmundur Vignir Helgason, Vanessa Henkel, Marc Herb, Alexander Hergovich, Anna Herman-Antosiewicz, Agustín Hernández, Carlos Hernandez, Sergio Hernandez-Diaz, Virginia Hernandez-Gea, Amaury Herpin, Judit Herreros, Javier H. Hervás, Daniel Hesselson, Claudio Hetz, Volker T. Heussler, Yujiro Higuchi, Sabine Hilfiker, Joseph A. Hill, William S. Hlavacek, Emmanuel A. Ho, Idy H.T. Ho, Philip Wing-Lok Ho, Shu-Leong Ho, Wan Yun Ho, G. Aaron Hobbs, Mark Hochstrasser, Peter H.M. Hoet, Daniel Hofius, Paul Hofman, Annika Höhn, Carina I. Holmberg, Jose R. Hombrebueno, Chang-Won Hong, Yi-Ren Hong, Lora V. Hooper, Thorsten Hoppe, Rastislav Horos, Yujin Hoshida, I-Lun Hsin, Hsin-Yun Hsu, Bing Hu, Dong Hu, Li-Fang Hu, Ming Chang Hu, Ronggui Hu, Wei Hu, Yu-Chen Hu, Zhuo-Wei Hu, Fang Hua, Jinlian Hua, Yingqi Hua, Chongmin Huan, Canhua Huang, Chuanshu Huang, Chuanxin Huang, Chunling Huang, Haishan Huang, Kun Huang, Michael L.H. Huang, Rui Huang, Shan Huang, Tianzhi Huang, Xing Huang, Yuxiang Jack Huang, Tobias B. Huber, Virginie Hubert, Christian A. Hubner, Stephanie M. Hughes, William E. Hughes, Magali Humbert, Gerhard Hummer, James H. Hurley, Sabah Hussain, Salik Hussain, Patrick J. Hussey, Martina Hutabarat, Hui-Yun Hwang, Seungmin Hwang, Antonio Ieni, Fumiyo Ikeda, Yusuke Imagawa, Yuzuru Imai, Carol Imbriano, Masaya Imoto, Denise M. Inman, Ken Inoki, Juan Iovanna, Renato V. Iozzo, Giuseppe Ippolito, Javier E. Irazoqui, Pablo Iribarren, Mohd Ishaq, Makoto Ishikawa, Nestor Ishimwe, Ciro Isidoro, Nahed Ismail, Shohreh Issazadeh-Navikas, Eisuke Itakura, Daisuke Ito, Davor Ivankovic, Saška Ivanova, Anand Krishnan V. Iyer, José M. Izquierdo, Masanori Izumi, Marja Jäättelä, Majid Sakhi Jabir, William T. Jackson, Nadia Jacobo-Herrera, Anne-Claire Jacomin, Elise Jacquin, Pooja Jadiya, Hartmut Jaeschke, Chinnaswamy Jagannath, Arjen J. Jakobi, Johan Jakobsson, Bassam Janji, Pidder Jansen-Dürr, Patric J. Jansson, Jonathan Jantsch, Sławomir Januszewski, Alagie Jassey, Steve Jean, Hélène Jeltsch-David, Pavla Jendelova, Andreas Jenny, Thomas E. Jensen, Niels Jessen, Jenna L. Jewell, Jing Ji, Lijun Jia, Rui Jia, Liwen Jiang, Qing Jiang, Richeng Jiang, Teng Jiang, Xuejun Jiang, Yu Jiang, Maria Jimenez-Sanchez, Eun-Jung Jin, Fengyan Jin, Hongchuan Jin, Li Jin, Luqi Jin, Meiyan Jin, Si Jin, Eun-Kyeong Jo, Carine Joffre, Terje Johansen, Gail V.W. Johnson, Simon A. Johnston, Eija Jokitalo, Mohit Kumar Jolly, Leo A.B. Joosten, Joaquin Jordan, Bertrand Joseph, Dianwen Ju, Jeong-Sun Ju, Jingfang Ju, Esmeralda Juárez, Delphine Judith, Gábor Juhász, Youngsoo Jun, Chang Hwa Jung, Sung-Chul Jung, Yong Keun Jung, Heinz Jungbluth, Johannes Jungverdorben, Steffen Just, Kai Kaarniranta, Allen Kaasik, Tomohiro Kabuta, Daniel Kaganovich, Alon Kahana, Renate Kain, Shinjo Kajimura, Maria Kalamvoki, Manjula Kalia, Danuta S. Kalinowski, Nina Kaludercic, Ioanna Kalvari, Joanna Kaminska, Vitaliy O. Kaminskyy, Hiromitsu Kanamori, Keizo Kanasaki, Chanhee Kang, Rui Kang, Sang Sun Kang, Senthilvelrajan Kaniyappan, Tomotake Kanki, Thirumala-Devi Kanneganti, Anumantha G. Kanthasamy, Arthi Kanthasamy, Marc Kantorow, Orsolya Kapuy, Michalis V. Karamouzis, Md. Razaul Karim, Parimal Karmakar, Rajesh G. Katare, Masaru Kato, Stefan H.E. Kaufmann, Anu Kauppinen, Gur P. Kaushal, Susmita Kaushik, Kiyoshi Kawasaki, Kemal Kazan, Po-Yuan Ke, Damien J. Keating, Ursula Keber, John H. Kehrl, Kate E. Keller, Christian W. Keller, Jongsook Kim Kemper, Candia M. Kenific, Oliver Kepp, Stephanie Kermorgant, Andreas Kern, Robin Ketteler, Tom G. Keulers, Boris Khalfin, Hany Khalil, Bilon Khambu, Shahid Y. Khan, Vinoth Kumar Megraj Khandelwal, Rekha Khandia, Widuri Kho, Noopur V. Khobrekar, Sataree Khuansuwan, Mukhran Khundadze, Samuel A. Killackey, Dasol Kim, Deok Ryong Kim, Do-Hyung Kim, Dong-Eun Kim, Eun Young Kim, Eun-Kyoung Kim, Hak-Rim Kim, Hee-Sik Kim, Hyung-Ryong Kim, Jeong Hun Kim, Jin Kyung Kim, Jin-Hoi Kim, Joungmok Kim, Ju Hwan Kim, Keun Il Kim, Peter K. Kim, Seong-Jun Kim, Scot R. Kimball, Adi Kimchi, Alec C. Kimmelman, Tomonori Kimura, Matthew A. King, Kerri J. Kinghorn, Conan G. Kinsey, Vladimir Kirkin, Lorrie A. Kirshenbaum, Sergey L. Kiselev, Shuji Kishi, Katsuhiko Kitamoto, Yasushi Kitaoka, Kaio Kitazato, Richard N. Kitsis, Josef T. Kittler, Ole Kjaerulff, Peter S. Klein, Thomas Klopstock, Jochen Klucken, Helene Knævelsrud, Roland L. Knorr, Ben C.B. Ko, Fred Ko, Jiunn-Liang Ko, Hotaka Kobayashi, Satoru Kobayashi, Ina Koch, Jan C. Koch, Ulrich Koenig, Donat Kögel, Young Ho Koh, Masato Koike, Sepp D. Kohlwein, Nur M. Kocaturk, Masaaki Komatsu, Jeannette König, Toru Kono, Benjamin T. Kopp, Tamas Korcsmaros, Gözde Korkmaz, Viktor I. Korolchuk, Mónica Suárez Korsnes, Ali Koskela, Janaiah Kota, Yaichiro Kotake, Monica L. Kotler, Yanjun Kou, Michael I. Koukourakis, Evangelos Koustas, Attila L. Kovacs, Tibor Kovács, Daisuke Koya, Tomohiro Kozako, Claudine Kraft, Dimitri Krainc, Helmut Krämer, Anna D. Krasnodembskaya, Carole Kretz-Remy, Guido Kroemer, Nicholas T. Ktistakis, Kazuyuki Kuchitsu, Sabine Kuenen, Lars Kuerschner, Thomas Kukar, Ajay Kumar, Ashok Kumar, Deepak Kumar, Dhiraj Kumar, Sharad Kumar, Shinji Kume, Caroline Kumsta, Chanakya N. Kundu, Mondira Kundu, Ajaikumar B. Kunnumakkara, Lukasz Kurgan, Tatiana G. Kutateladze, Ozlem Kutlu, SeongAe Kwak, Ho Jeong Kwon, Taeg Kyu Kwon, Yong Tae Kwon, Irene Kyrmizi, Albert La Spada, Patrick Labonté, Sylvain Ladoire, Ilaria Laface, Frank Lafont, Diane C. Lagace, Vikramjit Lahiri, Zhibing Lai, Angela S. Laird, Aparna Lakkaraju, Trond Lamark, Sheng-Hui Lan, Ane Landajuela, Darius J. R. Lane, Jon D. Lane, Charles H. Lang, Carsten Lange, Ülo Langel, Rupert Langer, Pierre Lapaquette, Jocelyn Laporte, Nicholas F. LaRusso, Isabel Lastres-Becker, Wilson Chun Yu Lau, Gordon W. Laurie, Sergio Lavandero, Betty Yuen Kwan Law, Helen Ka-wai Law, Rob Layfield, Weidong Le, Herve Le Stunff, Alexandre Y. Leary, Jean-Jacques Lebrun, Lionel Y.W. Leck, Jean-Philippe Leduc-Gaudet, Changwook Lee, Chung-Pei Lee, Da-Hye Lee, Edward B. Lee, Erinna F. Lee, Gyun Min Lee, He-Jin Lee, Heung Kyu Lee, Jae Man Lee, Jason S. Lee, Jin-A Lee, Joo-Yong Lee, Jun Hee Lee, Michael Lee, Min Goo Lee, Min Jae Lee, Myung-Shik Lee, Sang Yoon Lee, Seung-Jae Lee, Stella Y. Lee, Sung Bae Lee, Won Hee Lee, Ying-Ray Lee, Yong-ho Lee, Youngil Lee, Christophe Lefebvre, Renaud Legouis, Yu L. Lei, Yuchen Lei, Sergey Leikin, Gerd Leitinger, Leticia Lemus, Shuilong Leng, Olivia Lenoir, Guido Lenz, Heinz Josef Lenz, Paola Lenzi, Yolanda León, Andréia M. Leopoldino, Christoph Leschczyk, Stina Leskelä, Elisabeth Letellier, Chi-Ting Leung, Po Sing Leung, Jeremy S. Leventhal, Beth Levine, Patrick A. Lewis, Klaus Ley, Bin Li, Da-Qiang Li, Jianming Li, Jing Li, Jiong Li, Ke Li, Liwu Li, Mei Li, Min Li, Min Li, Ming Li, Mingchuan Li, Pin-Lan Li, Ming-Qing Li, Qing Li, Sheng Li, Tiangang Li, Wei Li, Wenming Li, Xue Li, Yi-Ping Li, Yuan Li, Zhiqiang Li, Zhiyong Li, Zhiyuan Li, Jiqin Lian, Chengyu Liang, Qiangrong Liang, Weicheng Liang, Yongheng Liang, YongTian Liang, Guanghong Liao, Lujian Liao, Mingzhi Liao, Yung-Feng Liao, Mariangela Librizzi, Pearl P. Y. Lie, Mary A. Lilly, Hyunjung J. Lim, Thania R.R. Lima, Federica Limana, Chao Lin, Chih-Wen Lin, Dar-Shong Lin, Fu-Cheng Lin, Jiandie D. Lin, Kurt M. Lin, Kwang-Huei Lin, Liang-Tzung Lin, Pei-Hui Lin, Qiong Lin, Shaofeng Lin, Su-Ju Lin, Wenyu Lin, Xueying Lin, Yao-Xin Lin, Yee-Shin Lin, Rafael Linden, Paula Lindner, Shuo-Chien Ling, Paul Lingor, Amelia K. Linnemann, Yih-Cherng Liou, Marta M. Lipinski, Saška Lipovšek, Vitor A. Lira, Natalia Lisiak, Paloma B. Liton, Chao Liu, Ching-Hsuan Liu, Chun-Feng Liu, Cui Hua Liu, Fang Liu, Hao Liu, Hsiao-Sheng Liu, Hua-feng Liu, Huifang Liu, Jia Liu, Jing Liu, Julia Liu, Leyuan Liu, Longhua Liu, Meilian Liu, Qin Liu, Wei Liu, Wende Liu, Xiao-Hong Liu, Xiaodong Liu, Xingguo Liu, Xu Liu, Xuedong Liu, Yanfen Liu, Yang Liu, Yang Liu, Yueyang Liu, Yule Liu, J. Andrew Livingston, Gerard Lizard, Jose M. Lizcano, Senka Ljubojevic-Holzer, Matilde E. LLeonart, David Llobet-Navàs, Alicia Llorente, Chih Hung Lo, Damián Lobato-Márquez, Qi Long, Yun Chau Long, Ben Loos, Julia A. Loos, Manuela G. López, Guillermo López-Doménech, José Antonio López-Guerrero, Ana T. López-Jiménez, Óscar López-Pérez, Israel López-Valero, Magdalena J. Lorenowicz, Mar Lorente, Peter Lorincz, Laura Lossi, Sophie Lotersztajn, Penny E. Lovat, Jonathan F. Lovell, Alenka Lovy, Péter Lőw, Guang Lu, Haocheng Lu, Jia-Hong Lu, Jin-Jian Lu, Mengji Lu, Shuyan Lu, Alessandro Luciani, John M. Lucocq, Paula Ludovico, Micah A. Luftig, Morten Luhr, Diego Luis-Ravelo, Julian J. Lum, Liany Luna-Dulcey, Anders H. Lund, Viktor K. Lund, Jan D. Lünemann, Patrick Lüningschrör, Honglin Luo, Rongcan Luo, Shouqing Luo, Zhi Luo, Claudio Luparello, Bernhard Lüscher, Luan Luu, Alex Lyakhovich, Konstantin G. Lyamzaev, Alf Håkon Lystad, Lyubomyr Lytvynchuk, Alvin C. Ma, Changle Ma, Mengxiao Ma, Ning-Fang Ma, Quan-Hong Ma, Xinliang Ma, Yueyun Ma, Zhenyi Ma, Ormond A. MacDougald, Fernando Macian, Gustavo C. MacIntosh, Jeffrey P. MacKeigan, Kay F. Macleod, Sandra Maday, Frank Madeo, Muniswamy Madesh, Tobias Madl, Julio Madrigal-Matute, Akiko Maeda, Yasuhiro Maejima, Marta Magarinos, Poornima Mahavadi, Emiliano Maiani, Kenneth Maiese, Panchanan Maiti, Maria Chiara Maiuri, Barbara Majello, Michael B. Major, Elena Makareeva, Fayaz Malik, Karthik Mallilankaraman, Walter Malorni, Alina Maloyan, Najiba Mammadova, Gene Chi Wai Man, Federico Manai, Joseph D. Mancias, Eva-Maria Mandelkow, Michael A. Mandell, Angelo A. Manfredi, Masoud H. Manjili, Ravi Manjithaya, Patricio Manque, Bella B. Manshian, Raquel Manzano, Claudia Manzoni, Kai Mao, Cinzia Marchese, Sandrine Marchetti, Anna Maria Marconi, Fabrizio Marcucci, Stefania Mardente, Olga A. Mareninova, Marta Margeta, Muriel Mari, Sara Marinelli, Oliviero Marinelli, Guillermo Mariño, Sofia Mariotto, Richard S. Marshall, Mark R. Marten, Sascha Martens, Alexandre P.J. Martin, Katie R. Martin, Sara Martin, Shaun Martin, Adrián Martín-Segura, Miguel A. Martín-Acebes, Inmaculada Martin-Burriel, Marcos Martin-Rincon, Paloma Martin-Sanz, José A. Martina, Wim Martinet, Aitor Martinez, Ana Martinez, Jennifer Martinez, Moises Martinez Velazquez, Nuria Martinez-Lopez, Marta Martinez-Vicente, Daniel O. Martins, Joilson O. Martins, Waleska K. Martins, Tania Martins-Marques, Emanuele Marzetti, Shashank Masaldan, Celine Masclaux-Daubresse, Douglas G. Mashek, Valentina Massa, Lourdes Massieu, Glenn R. Masson, Laura Masuelli, Anatoliy I. Masyuk, Tetyana V. Masyuk, Paola Matarrese, Ander Matheu, Satoaki Matoba, Sachiko Matsuzaki, Pamela Mattar, Alessandro Matte, Domenico Mattoscio, José L. Mauriz, Mario Mauthe, Caroline Mauvezin, Emanual Maverakis, Paola Maycotte, Johanna Mayer, Gianluigi Mazzoccoli, Cristina Mazzoni, Joseph R. Mazzulli, Nami McCarty, Christine McDonald, Mitchell R. McGill, Sharon L. McKenna, BethAnn McLaughlin, Fionn McLoughlin, Mark A. McNiven, Thomas G. McWilliams, Fatima Mechta-Grigoriou, Tania Catarina Medeiros, Diego L. Medina, Lynn A. Megeney, Klara Megyeri, Maryam Mehrpour, Jawahar L. Mehta, Alfred J. Meijer, Annemarie H. Meijer, Jakob Mejlvang, Alicia Meléndez, Annette Melk, Gonen Memisoglu, Alexandrina F. Mendes, Delong Meng, Fei Meng, Tian Meng, Rubem Menna-Barreto, Manoj B. Menon, Carol Mercer, Anne E. Mercier, Jean-Louis Mergny, Adalberto Merighi, Seth D. Merkley, Giuseppe Merla, Volker Meske, Ana Cecilia Mestre, Shree Padma Metur, Christian Meyer, Hemmo Meyer, Wenyi Mi, Jeanne Mialet-Perez, Junying Miao, Lucia Micale, Yasuo Miki, Enrico Milan, Małgorzata Milczarek, Dana L. Miller, Samuel I. Miller, Silke Miller, Steven W. Millward, Ira Milosevic, Elena A. Minina, Hamed Mirzaei, Hamid Reza Mirzaei, Mehdi Mirzaei, Amit Mishra, Nandita Mishra, Paras Kumar Mishra, Maja Misirkic Marjanovic, Roberta Misasi, Amit Misra, Gabriella Misso, Claire Mitchell, Geraldine Mitou, Tetsuji Miura, Shigeki Miyamoto, Makoto Miyazaki, Mitsunori Miyazaki, Taiga Miyazaki, Keisuke Miyazawa, Noboru Mizushima, Trine H. Mogensen, Baharia Mograbi, Reza Mohammadinejad, Yasir Mohamud, Abhishek Mohanty, Sipra Mohapatra, Torsten Möhlmann, Asif Mohmmed, Anna Moles, Kelle H. Moley, Maurizio Molinari, Vincenzo Mollace, Andreas Buch Møller, Bertrand Mollereau, Faustino Mollinedo, Costanza Montagna, Mervyn J. Monteiro, Andrea Montella, L. Ruth Montes, Barbara Montico, Vinod K. Mony, Giacomo Monzio Compagnoni, Michael N. Moore, Mohammad A. Moosavi, Ana L. Mora, Marina Mora, David Morales-Alamo, Rosario Moratalla, Paula I. Moreira, Elena Morelli, Sandra Moreno, Daniel Moreno-Blas, Viviana Moresi, Benjamin Morga, Alwena H. Morgan, Fabrice Morin, Hideaki Morishita, Orson L. Moritz, Mariko Moriyama, Yuji Moriyasu, Manuela Morleo, Eugenia Morselli, Jose F. Moruno-Manchon, Jorge Moscat, Serge Mostowy, Elisa Motori, Andrea Felinto Moura, Naima Moustaid-Moussa, Maria Mrakovcic, Gabriel Muciño-Hernández, Anupam Mukherjee, Subhadip Mukhopadhyay, Jean M. Mulcahy Levy, Victoriano Mulero, Sylviane Muller, Christian Münch, Ashok Munjal, Pura Munoz-Canoves, Teresa Muñoz-Galdeano, Christian Münz, Tomokazu Murakawa, Claudia Muratori, Brona M. Murphy, J. 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Spindle Scaling Is Governed by Cell Boundary Regulation of Microtubule Nucleation
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Andreas Müller, Deborah Schmidt, C. Shan Xu, Song Pang, Joyson Verner D’Costa, Susanne Kretschmar, Carla Münster, Thomas Kurth, Florian Jug, Martin Weigert, Harald F. Hess, Michele Solimena
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Protein Condensates as Aging Maxwell Fluids
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Yuta Suzuki, Eugene W. Myers, Shinichi Morishita
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PLoS Comput Biol; 16(12): e1008412
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Nishant Kumar, Stefan Gumhold
FuseVis: Interpreting Neural Networks for Image Fusion Using Per-Pixel Saliency Visualization
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Pierre Gillotay, Meghna Shankar, Benoit Haerlingen, Sema Elif Eski, Macarena Pozo-Morales, Inés Garteizgogeascoa, Susanne Reinhardt, Annekathrin Kränkel, Juliane Bläsche, Andreas Petzold, Nikolay Ninov, Gokul Kesavan, Christian Lange, Michael Brand, Anne Lefort, Frédérick Libert, Vincent Detours, Sabine Costagliola, Singh Sumeet Pal
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Vijay S. Adusumilli, Tara L. Walker, Rupert W. Overall, Gesa M. Klatt, Salma A. Zeidan, Sara Zocher, Dilyana G. Kirova, Konstantinos Ntitsias, Tim J. Fischer, Alex M. Sykes, Susanne Reinhardt, Andreas Dahl, Jörg Mansfeld, Annette E. Rünker, Gerd Kempermann
ROS Dynamics Delineate Functional States of Hippocampal Neural Stem Cells and Link to Their Activity-Dependent Exit from Quiescence
Cell Stem Cell 28(2):300–314.e6
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Persistent or Transient Human β Cell Dysfunction Induced by Metabolic Stress: Specific Signatures and Shared Gene Expression with Type 2 Diabetes
Cell Reports 33(9):108466
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Alexandre Guillet, Edgar Roldán, Frank Jülicher
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New J. Phys. 22(12):123038
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Stephan Daetwyler, Carl D Modes, Reto Fiolka
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Biol Open, 1;9(11):bio056200
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Kristian Le Vay, Ben M. Carter, Daniel W. Watkins, T.-Y. Dora Tang, Valeska P. Ting, Helmut Cölfen, Robert P. Rambo, Andrew J. Smith, J. L. Ross Anderson, Adam W. Perriman
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Alex H. M. Ng, Parastoo Khoshakhlagh, Jesus Eduardo Rojo Arias, Giovanni Pasquini, Kai Wang, Anka Swiersy, Seth L. Shipman, Evan Appleton, Kiavash Kiaee, Richie E. Kohman, Andyna Vernet, Matthew Dysart, Kathleen Leeper, Wren Saylor, Jeremy Y. Huang, Amanda Graveline, Jussi Taipale, David E. Hill, Marc Vidal, Juan M. Melero-Martin, Volker Busskamp, George M. Church
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Nat Biotechnol 39(4):510–519
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Stefan Rothe, Qian Zhang, Nektarios Koukourakis, Jrgen Czarske
Intensity-Only Mode Decomposition on Multimode Fibers Using a Densely Connected Convolutional Network
J. Lightwave Technol. 39(6):1672–1679
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Lydie Flasse, Coline Schewin, Anne Grapin-Botton
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Current Topics in Developmental Biology 75–110
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Jennifer J. Lühr, Nils Alex, Lukas Amon, Martin Kräter, Markéta Kubánková, Erdinc Sezgin, Christian H. K. Lehmann, Lukas Heger, Gordon F. Heidkamp, Ana-Sunčana Smith, Vasily Zaburdaev, Rainer A. Böckmann, Ilya Levental, Michael L. Dustin, Christian Eggeling, Jochen Guck, Diana Dudziak
Maturation of Monocyte-Derived DCs Leads to Increased Cellular Stiffness, Higher Membrane Fluidity, and Changed Lipid Composition
Front. Immunol. 11
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Valentin Gensbittel, Martin Kräter, Sébastien Harlepp, Ignacio Busnelli, Jochen Guck, Jacky G. Goetz
Mechanical Adaptability of Tumor Cells in Metastasis
Developmental Cell 56(2):164–179
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Johannes Gürtler, Felix Greiffenhagen, Jakob Woisetschläger, Robert Kuschmierz, Jürgen Czarske
Seedingless measurement of density fluctuations and flow velocity using high-speed holographic interferometry in a swirl-stabilized flame
Optics and Lasers in Engineering 139:106481
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Buket Ucar, Janko Kajtez, Bettina M. Foidl, Dimitri Eigel, Carsten Werner, Katherine R. Long, Jenny Emnéus, Joëlle Bizeau, Mihai Lomora, Abhay Pandit, Ben Newland, Christian Humpel
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Acta Biomaterialia 121:250–262
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Louise M. Jawerth, Mahdiye Ijavi, Martine Ruer, Shambaditya Saha, Marcus Jahnel, Anthony A. Hyman, Frank Jülicher, Elisabeth Fischer-Friedrich
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Allison Lewis, Rashmiparvathi Keshara, Yung Hae Kim, Anne Grapin-Botton
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Ulrich Bonda, Anna Jaeschke, Anthony Lighterness, Jeremy Baldwin, Carsten Werner, Elena M. De-Juan-Pardo, Laura J. Bray
3D Quantification of Vascular-Like Structures in z Stack Confocal Images
STAR Protocols 1(3):100180
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Gina A Monzon, Lara Scharrel, Ashwin DSouza, Verena Henrichs, Ludger Santen, Stefan Diez
Stable tug-of-war between kinesin-1 and cytoplasmic dynein upon different ATP and roadblock concentrations
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Sadra Bakhshandeh, Hubert M. Taïeb, Raimund Schlüßler, Kyoohyun Kim, Timon Beck, Anna Taubenberger, Jochen Guck, Amaia Cipitria
Optical quantification of intracellular mass density and cell mechanics in 3D mechanical confinement
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Journal of Cell Biology 219(4)
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2019 International Conference on Document Analysis and Recognition (ICDAR)
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2019 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR)
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Biology of the Cell 112(4):103–112
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Samuel J. Bose, Georg Krainer, Demi R.S. Ng, Mathias Schenkel, Hideki Shishido, Jae Seok Yoon, Peter M. Haggie, Michael Schlierf, David N. Sheppard, William R. Skach
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2019 IEEE International Ultrasonics Symposium (IUS)
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Human-Specific ARHGAP11B Acts in Mitochondria to Expand Neocortical Progenitors by Glutaminolysis
Neuron 105(5):867–881.e9
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Felix Greiffenhagen, Jakob Woisetschläger, Johannes Gürtler, Jürgen Czarske
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PLoS ONE 14(12):e0220220
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Macromolecules 52(24):9578–9584
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Katrin Wagner, Salvatore Girardo, Ruchi Goswami, Gonzalo Rosso, Elke Ulbricht, Paul Müller, Despina Soteriou, Nicole Träber, Jochen Guck
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Johanna Lattner, Weihua Leng, Elisabeth Knust, Marko Brankatschk, David Flores-Benitez
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eLife 8
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Oliver Beutel, Riccardo Maraspini, Karina Pombo-García, Cécilie Martin-Lemaitre, Alf Honigmann
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Alexis R. Barr, Jörg Mansfeld
FEBS Letters Special Issue: Cell Cycle Control
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IEEE/ACM Trans. Comput. Biol. and Bioinf. 18(4):1405–1415
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Biophotonics Congress: Optics in the Life Sciences Congress 2019 (BODA,BRAIN,NTM,OMA,OMP)
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Biophotonics Congress: Optics in the Life Sciences Congress 2019 (BODA,BRAIN,NTM,OMA,OMP)
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Markian Pryshliak, Ahmet Hazini, Klaus Knoch, Babette Dieringer, Beatrice Tolksdorf, Michele Solimena, Jens Kurreck, Sandra Pinkert, Henry Fechner
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FEBS Letters 594(4):763–775
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Lucas Schirmer, Karolina Chwalek, Mikhail V. Tsurkan, Uwe Freudenberg, Carsten Werner
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Nusrat Jahan Lisa, Tuan Duy Anh Nguyen, Dirk Habich, Akash Kumar, Wolfgang Lehner
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2019 22nd Euromicro Conference on Digital System Design (DSD)
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Real-Time IR Tracking of Single Reflective Micromotors through Scattering Tissues
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A Proposed Framework for Interactive Virtual Reality In Situ Visualization of Parallel Numerical Simulations
IEEE 9th Symposium on Large Data Analysis and Visualization (LDAV), Vancouver, BC, Canada, 2019, pp. 95–96,
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Temperature-Induced Mechanomodulation of Interpenetrating Networks of Star Poly(ethylene glycol)–Heparin and Poly(N-isopropylacrylamide)
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Biointerphases 14(5)
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Ben D. Cox, Maximina H. Yun, Kenneth D. Poss
Can laboratory model systems instruct human limb regeneration?
Development 146(20):dev181016
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Hannes Mutschler, Tom Robinson, T.‐Y. Dora Tang, Seraphine Wegner
Special Issue on Bottom‐Up Synthetic Biology
ChemBioChem 20(20):2533–2534
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J.W. Czarske, E. Scharf, R. Kuschmierz
Fast 3D imaging with lensless holographic endoscopy employing coherent fiber bundles
Frontiers in Optics + Laser Science APS/DLS
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Polina Anikeeva, Edward Boyden, Clifford Brangwynne, Ibrahim I. Cissé, Oliver Fiehn, Petra Fromme, Anne-Claude Gingras, Casey S. Greene, Edith Heard, Stefan W. Hell, Elizabeth Hillman, Grant Jay Jensen, Rachel Karchin, Laura L. Kiessling, Benjamin P. Kleinstiver, Rob Knight, Philipp Kukura, Madeline A. Lancaster, Nicholas Loman, Loren Looger, Emma Lundberg, Qingming Luo, Atsushi Miyawaki, Eugene W. Myers, Garry P. Nolan, Paola Picotti, Wolf Reik, Markus Sauer, Alex K. Shalek, Jay Shendure, Nikolai Slavov, Amos Tanay, Olga Troyanskaya, David van Valen, Hong-Wei Wang, Chengqi Yi, Peng Yin, Magdalena Zernicka-Goetz, Xiaowei Zhuang
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Nat Methods 16(10):945–951
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Investigation of Sustained BMP Delivery in the Prevention of Medication‐Related Osteonecrosis of the Jaw (MRONJ) in a Rat Model
Macromolecular Bioscience 19(11)
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Elvis Koci, Dana Kuban, Nico Luettig, Dominik Olwig, Maik Thiele, Julius Gonsior, Wolfgang Lehner, Oscar Romero
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