PoL – Physics of Life | Publications

Publications

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2024

98 publication(s) listed

M Sreepadmanabh, Meenakshi Ganesh, Pratibha Sanjenbam, Christina Kurzthaler, Deepa Agashe & Tapomoy Bhattacharjee
Cell shape affects bacterial colony growth under physical confinement
Nat Commun 15, 9561 (Nov 8, 2024)
DOI: 10.1038/s41467-024-53989-6

Sudarshana Laha, Jonathan Bauermann, Frank Jülicher, Thomas C. T. Michaels, Christoph A. Weber
Chemical reactions regulated by phase-separated condensates
Phys. Rev. Research 6, 043092 (Nov 4, 2024)
DOI: 10.1103/PhysRevResearch.6.043092

Xueping Zhao, Susanne Liese, Alf Honigmann, Frank Jülicher, Christoph A Weber
Theory of wetting dynamics with surface binding
New J. Phys. 26 103025 (Oct 23, 2024)
DOI: 10.1088/1367-2630/ad80bb

Francois El-Daher, Stephen J Enos, Louisa K Drake, Daniel Wehner, Markus Westphal, Nicola J Porter, Catherina G Becker, Thomas Becker
Open Access Microglia are essential for tissue contraction in wound closure after brain injury in zebrafish larvae
Life Science Alliance 8 (1) e202403052; (online: Oct 17, 2024)
DOI: 10.26508/lsa.202403052

Alexandra Schauer, Jesse V. Veenvliet
Retinoid-enhanced human gastruloids
Nat Cell Biol 26, 1634–1636 (Oct 10, 2024)
DOI: 10.1038/s41556-024-01517-5

Chi Fung Willis Chow, Soumyadeep Ghosh, Anna Hadarovich, Agnes Toth-Petroczy
SHARK enables sensitive detection of evolutionary homologs and functional analogs in unalignable and disordered sequences
Proc Natl Acad Sci USA 121(42):e2401622121 (Oct 9, 2024)
DOI: 10.1073/pnas.2401622121

Elias H. Barriga
Following the electric current
Nat Rev Mol Cell Biol 25, 844 (Oct 4, 2024)
DOI: 10.1038/s41580-024-00781-5

Takashi Nishio, Helmut Schiessel
Coalescence of liquid or gel-like DNA-encapsulating microdroplets
J. Chem. Phys. 161, 134904 (Oct 2, 2024)
DOI: 10.1063/5.0223951

Heidi L. van de Wouw, Shuo-Ting Yen, Manon Valet, Joseph A. Garcia, Carlos O. Gomez, Antoine Vian, Yucen Liu, Jennifer Pollock, Petr Pospíšil, Otger Campàs*, Ellen M. Sletten*
Non-Ionic Fluorosurfactants for Droplet-Based in vivo Applications
Angew. Chem. Int. Ed., e202404956 (Sep 27, 2024)
* co-corresponding authors
DOI: 10.1002/ange.202404956

Boyi Wang, Frank Jülicher, Patrick Pietzonka
Condensate formation in a chiral lattice gas
New J. Phys. 26 093031 (Sep 24, 2024)
DOI: 10.1088/1367-2630/ad7490

Lukas Haugk, Holger Merlitz, Jens-Uwe Sommer
Single Chain Polymer Condensates under External Force
Macromolecules Vol 57/Issue 19 (Sep 24, 2024)
DOI: 10.1021/acs.macromol.4c01060

Metin G. Davutoglu, Veikko F. Geyer, Lukas Niese, Johannes R. Soltwedel, Marcelo L. Zoccoler, Valeria Sabatino, Robert Haase, Nils Kröger, Stefan Diez, Nicole Poulsen
Gliding motility of the diatom Craspedostauros australis coincides with the intracellular movement of raphid-specific myosins
Commun Biol 7, 1187 (Sep 23, 2024)
DOI: 10.1038/s42003-024-06889-w

Rahul M Sarate, Joel Hochstetter, Manon Valet, Adrien Hallou, Yura Song, Nordin Bansaccal, Melanie Ligare, Mariaceleste Aragona, Dan Engelman, Anaïs Bauduin, Otger Campàs*, Benjamin D Simons*, Cedric Blanpain*
Dynamic regulation of tissue fluidity controls skin repair during wound healing
Cell 187(19):5298–5315.e19 (Sep 19, 2024)
* co-corresponding authors
DOI: 10.1016/j.cell.2024.07.031

Pietro Luigi Muzzeddu, Andrea Gambassi, Jens-Uwe Sommer, Abhinav Sharma
Migration and Separation of Polymers in Nonuniform Active Baths
Phys. Rev. Lett. 133, 118102 (Sep 11, 2024)
DOI: 10.1103/PhysRevLett.133.118102

Lior Aram, Diede de Haan, Neta Varsano, James B. Gilchrist, Christoph Heintze, Ron Rotkopf, Katya Rechav, Nadav Elad, Nils Kröger, Assaf Ga
Intracellular morphogenesis of diatom silica is guided by local variations in membrane curvature
Nat Commun 15, 7888 (Sep 10, 2024)
DOI: 10.1038/s41467-024-52211-x

Jochen Krattenmacher, Manuel Lera-Ramirez, Alexandre Beber, Stepan Herynek, Lenka Grycova, Xiaocheng Liu, Pavel Neuzil, Francois Nedelec, Stefan Diez, Marcus Braun, Zdenek Lansky
Ase1 selectively increases the lifetime of antiparallel microtubule overlaps
Current Biology 34(17):4071–4080 (Sep 9, 2024)
DOI: 10.1016/j.cub.2024.07.055

Alfonso Martinez Arias, Nicolas Rivron, Naomi Moris, Patrick Tam, Cantas Alev, Jianping Fu, Anna-Katerina Hadjantonakis, Jacob H. Hanna, Gabriella Minchiotti, Olivier Pourquie, Guojun Sheng, Liliana Solnica Krezel, Jesse V. Veenvliet, Aryeh Warmflash
Criteria for the standardization of stem-cell-based embryo models
Nat Cell Biol 26, 1625–1628 (Sep 2, 2024)
DOI: 10.1038/s41556-024-01492-x

Rachael Deis, Tali Lerer-Goldshtein, Olha Baiko, Zohar Eyal, Dolev Brenman-Begin, Moshe Goldsmith, Sylvia Kaufmann, Uwe Heinig, Yonghui Dong, Sofya Lushchekina, Neta Varsano, Tsviya Olender, Meital Kupervaser, Ziv Porat, Smadar Levin-Zaidman, Iddo Pinkas, Rita Mateus, Dvir Gur
Genetic control over biogenic crystal morphogenesis in zebrafish
Nature Chemical Biology (Aug 30, 2024)
DOI: 10.1038/s41589-024-01722-1

Clemens Bilsing, Erik Nützenadel, Sebastian Burgmann, Jürgen Czarske, Lars Büttner
Adaptive-optical 3D microscopy for microfluidic multiphase flows
Light: Advanced Manufacturing 5, 35 (Aug 26, 2024)
DOI: 10.37188/lam.2024.037

Evelyn Abraham, Hella Hartmann, Takeshi Yoshimatsu, Tom Baden, Michael Brand
Restoration of cone-circuit functionality in the regenerating adult zebrafish retina
Dev Cell, 59(16):2158-2170.e6. (Aug 19, 2024)
DOI: 10.1016/j.devcel.2024.07.005

Harish P. Jain, Axel Voigt, Luiza Angheluta
From cell intercalation to flow, the importance of T1 transitions
Phys. Rev. Research 6, 033176 (Aug 15, 2024)
DOI: 10.1103/PhysRevResearch.6.033176

Sangwoo Kim, Rana Amini, Shuo-Ting Yen, Petr Pospisil, Arthur Boutillon, Ilker Ali Deniz, Otger Campàs*
A nuclear jamming transition in vertebrate organogenesis
Nat. Mater. 23(11):1592–1599 (Aug 12, 2024)
* corresponding author
DOI: 10.1038/s41563-024-01972-3

Leone Rossetti, Steffen Grosser, Juan Francisco Abenza, Léo Valon, Pere Roca-Cusachs, Ricard Alert, Xavier Trepat
Optogenetic generation of leader cells reveals a force–velocity relation for collective cell migration
Nature Physics, 1–11 (Aug 12, 2024)
DOI: 10.1038/s41567-024-02600-2

Pilar Lörzing, Philipp Schake, Michael Schlierf
Anisotropic DBSCAN for 3D SMLM Data Clustering
The Journal of Physical Chemistry B, Vol 128/Issue 33 (Aug 12, 2024)
DOI: doi/10.1021/acs.jpcb.4c02030

Markus Mukenhirn, Chen-Ho Wang, Tristan Guyomar, Matthew J. Bovyn, Michael F. Staddon, Rozemarijn E. van der Veen, Riccardo Maraspini, Linjie Lu, Cecilie Martin-Lemaitre, Masaki Sano, Martin Lehmann, Tetsuya Hiraiwa, Daniel Riveline, Alf Honigmann
Tight junctions control lumen morphology via hydrostatic pressure and junctional tension
Developmental Cell 59, 1–16 (online: Aug 12, 2024)
DOI: 10.1016/j.devcel.2024.07.016

Jana F. Fuhrmann, Abhijeet Krishna, Joris Paijmans, Charlie Duclut, Greta Cwikla, Suzanne Eaton, Marko Popović, Frank Jülicher, Carl D. Modes, Natalie A. Dye
Active shape programming drives Drosophila wing disc eversion
Sci. Adv.10,eadp0860 (Aug 9, 2024)
DOI: 10.1126/sciadv.adp0860

Tzer Han Tan, Aboutaleb Amiri, Irene Seijo-Barandiaran, Michael F. Staddon, Anne Materne, Sandra Tomas, Charlie Duclut, Marko Popović, Anne Grapin-Botton, Frank Jülicher
Emergent Chirality in Active Solid Rotation of Pancreas Spheres
PRX Life 2, 033006 (Aug 8, 2024)
DOI: 10.1103/PRXLife.2.033006

Mikolaj Ogrodnik, Juan Carlos Acosta, Peter D. Adams, Fabrizio d’Adda di Fagagna, Darren J. Baker, Cleo L. Bishop, Tamir Chandra, Manuel Collado, Jesus Gil, Vassilis Gorgoulis, Florian Gruber, Eiji Hara, Pidder Jansen-Dürr, Diana Jurk, Sundeep Khosla, James L. Kirkland, Valery Krizhanovsky, Tohru Minamino, Laura J. Niedernhofer, João F. Passos, Nadja A.R. Ring, Heinz Redl, Paul D. Robbins, Francis Rodier, Karin Scharffetter-Kochanek, John M. Sedivy, Ewa Sikora, Kenneth Witwer, Thomas von Zglinicki, Maximina H. Yun, Johannes Grillari, Marco Demaria
Guidelines for minimal information on cellular senescence experimentation in vivo
Cell 187(16):4150-4175 (Aug 8, 2024)
DOI: 10.1016/j.cell.2024.05.059

Karina Pombo-García, Omar Adame-Arana, Cecilie Martin-Lemaitre, Frank Jülicher, Alf Honigmann
Membrane prewetting by condensates promotes tight-junction belt formation
Nature 632, pages 647–655 (Aug 7, 2024)
DOI: 10.1038/s41586-024-07726-0

Arghya Majee, Christoph A. Weber, Frank Jülicher
Charge separation at liquid interfaces
Phys. Rev. Research 6, 033138 (Aug 5, 2024)
DOI: 10.1103/PhysRevResearch.6.033138

Veit Krause, Axel Voigt
Wrinkling of fluid deformable surfaces
Journal of the Royal Society Interface 21(216) (Jul 31, 2024)
DOI: 10.1098/rsif.2024.0056

Yanis Baouche, Thomas Franosch, Matthias Meiners, Christina Kurzthaler
Active Brownian particle under stochastic orientational resetting
New J. Phys. 26 073041 (Jul 25, 2024)
DOI: 10.1088/1367-2630/ad602a

Uwe Töpfer, Jinhee Ryu, Karla Yanín Guerra Santillán, Jana Schulze, Elisabeth Fischer-Friedrich, Guy Tanentzapf, Christian Dahmann
AdamTS proteases control basement membrane heterogeneity and organ shape in Drosophila
Cell Reports 43(7), 114399 (Jul 23, 2024)
DOI: 10.1016/j.celrep.2024.114399

Manon Valet*, Juan M Iglesias-Artola*, Falk Elsner, Anatol W Fritsch, Otger Campàs
A Heating and Cooling Stage With Fast Temporal Control for Biological Applications
IEEE Open Journal of Engineering in Medicine and Biology, vol. 5, pp. 573–575 (Jul 12, 2024)
* co-corresponding authors
DOI: 10.1109/OJEMB.2024.3426912

Suchismita Das, Matteo Ciarchi, Ziqi Zhou, Jing Yan, Jie Zhang, Ricard Alert
Flocking by Turning Away
Phys. Rev. X 14, 031008 (Jul 12, 2024)
DOI: 10.1103/PhysRevX.14.031008

Oliver Bludau, Anke Weber, Viktoria Bosak, Veronika Kuscha, Kristin Dietrich, Stefan Hans, Michael Brand
Inflammation is a critical factor for successful regeneration of the adult zebrafish retina in response to diffuse light lesion
Front. Cell Dev. Biol. 12:1332347. (Jul 12, 2024)
DOI: 10.3389/fcell.2024.1332347

Xi Chen, Rabea Seyboldt, Jens-Uwe Sommer, Frank Jülicher, Tyler Harmon
Droplet Differentiation by a Chemical Switch
Phys. Rev. Lett. 133, 028402 (Jul 9, 2024)
DOI: 10.1103/PhysRevLett.133.028402

Cedric Landerer, Maxim Scheremetjew, HongKee Moon, Lena Hersemann, Agnes Toth-Petroczy
deTELpy: Python package for high-throughput detection of amino acid substitutions in mass spectrometry datasets
Bioinformatics, Volume 40, Issue 7 (Jun 28, 2024)
DOI: 10.1093/bioinformatics/btae424

Natalia Jaroszynska, Andrea Salzinger, Themistoklis M. Tsarouchas, Catherina G. Becker, Thomas Becker, David A. Lyons, Ryan B. MacDonald, Marcus Keatinge
C9ORF72 Deficiency Results in Neurodegeneration in the Zebrafish Retina
Journal of Neuroscience, 44 (25) e2128232024 (Jun 19, 2024)
DOI: 10.1523/JNEUROSCI.2128-23.2024

Adriano Bolondi, Benjamin K. Law, Helene Kretzmer, Seher Ipek Gassaloglu, René Buschow, Christina Riemenschneider, Dian Yang, Maria Walther, Jesse V. Veenvliet, Alexander Meissner, Zachary D. Smith, Michelle M. Chan
Reconstructing axial progenitor field dynamics in mouse stem cell-derived embryoids
Developmental Cell 59, 1489–1505 (Jun 17, 2024)
DOI: 10.1016/j.devcel.2024.03.024

Teije C. Middelkoop, Jonas Neipel, Caitlin E. Cornell, Ronald Naumann, Lokesh G. Pimpale, Frank Jülicher, Stephan W. Grill
A cytokinetic ring-driven cell rotation achieves Hertwig’s rule in early development
Proc. Natl. Acad. Sci. USA 121(25), e2318838121 (Jun 13, 2024)
DOI: 10.1073/pnas.2318838121

Rainer Backofen, Abdelrahman Y. A. Altawil, Marco Salvalaglio, and Axel Voigt
Nonequilibrium hyperuniform states in active turbulence
Proc Natl Acad Sci U S A 121(24):e2320719121 (Jun 7, 2024)
DOI: 10.1073/pnas.2320719121

Sophie Klempahn, Helmut Schiessel, Ralf Blossey
Chromatin remodelers: a concise introduction for biophysicists
Biophysical Reviews Volume 16, pages 357–363 (Jun 6, 2024)
DOI: 10.1007/s12551-024-01199-1

Sophie Klempahn, Ralf Blossey, Helmut Schiessel
Molecular motor in a box: Attractors, repellers, and ratchets in chromatin
Phys. Rev. Research 6, 023236 (Jun 3, 2024)
DOI: 10.1103/PhysRevResearch.6.023236

Laura Meißner, Lukas Niese, Stefan Diez
Helical motion and torque generation by microtubule motors
Current Opinion in Cell Biology 88:102367 (Jun 1, 2024)
DOI: 10.1016/j.ceb.2024.102367

Julian Lich, Tom Glosemeyer, Jürgen Czarske, Robert Kuschmierz
Single-shot 3D incoherent imaging with diffuser endoscopy
Light: Advanced Manufacturing 5(2):218-228 (online: May 30, 2024)
DOI: 10.37188/lam.2024.015

Hongjuan Zhang, Dongqi Liu, Jiawei Zhang, Ellen Adams, Jingjing Gong, Wenhui Li, Bing Wang, Xueqing Liu, Renqiang Yang, Feng Wei, Heather C. Allen
GMP affected assembly behaviors of phosphatidylethanolamine monolayers elucidated by multi-resolved SFG-VS and BAM
Colloids and Surfaces B: Biointerfaces, 241, 113995 (May 26, 2024)
DOI: 10.1016/j.colsurfb.2024.113995

Maria Luisa Romero, Jonas Poehls, Anastasiia Kirilenko, Doris Richter, Tobias Jumel, Anna Shevchenko, Agnes Toth-Petroczy
Environment modulates protein heterogeneity through transcriptional and translational stop codon readthrough
Nature Communications volume 15, Article number: 4446 (May 24, 2024)
DOI: 10.1038/s41467-024-48387-x

Suse Seidemann, Florian Salomon, Karl B. Hoffmann, Thomas Kurth, Ivo F. Sbalzarini, Robert Haase, Marius Ader
Automated quantification of photoreceptor outer segments in developing and degenerating retinas on microscopy images across scales
Front. Mol. Neurosci. Sec. Methods and Model Organisms Volume 17 (May 24, 2024)
DOI: 10.3389/fnmol.2024.1398447

Arthur Boutillon, Samhita P. Banavar, Otger Campàs*
Conserved physical mechanisms of cell and tissue elongation
Development 151(10): dev202687 (May 20, 2024)
* corresponding author
DOI: 10.1242/dev.202687

Arun Pal, Dajana Grossmann, Hannes Glaß, Vitaly Zimyanin, René Günther, Marica Catinozzi, Tobias M Boeckers, Jared Sterneckert, Erik Storkebaum, Susanne Petri, Florian Wegner, Stephan W Grill, Francisco Pan-Montojo, Andreas Hermann
Glycolic acid and D-lactate—putative products of DJ-1—restore neurodegeneration in FUS - and SOD1-ALS
Life Science Alliance, 7 (8) e202302535; (May 17, 2024)
DOI: /10.26508/lsa.202302535

Georgios Tsissios, Anthony Sallese, J. Raul Perez-Estrada, Jared A. Tangeman, Weihao Chen, Byran Smucker, Sophia C. Ratvasky, Erika Grajales-Esquivel, Arielle Martinez, Kimberly J. Visser, Alberto Joven Araus, Hui Wang, András Simon, Maximina H. Yun, Katia Del Rio-Tsonis
Macrophages modulate fibrosis during newt lens regeneration
Stem Cell Res Ther. 14;15(1):141 (May 14, 2024)
DOI: 10.1186/s13287-024-03740-1

Jiawei Sun, Robert Kuschmierz, Ori Katz, Nektarios Koukourakis, Juergen W. Czarske
Lensless fiber endomicroscopy in biomedicine
PhotoniX 5, 18 (May 14, 2024)
DOI: 10.1186/s43074-024-00133-8

Marco Salvalaglio, Dominic J. Skinner, Jörn Dunkel, Axel Voigt
Persistent homology and topological statistics of hyperuniform point clouds
Phys. Rev. Research 6, 023107 (May 1, 2024)
DOI: 10.1103/PhysRevResearch.6.023107

Seungjae Lee, Lucas Braun, Frieder Bönisch, Malte Schröder, Moritz Thümler, Marc Timme
Complexified Synchrony
Chaos 34 (5): 053141. (May 2024)
DOI: 10.1063/5.0205897

Daniel Dornbusch, Marcel Hanke, Emilia Tomm, Charlotte Kielar, Guido Grundmeier, Adrian Keller, Karim Fahmy
Cold denaturation of DNA origami nanostructures
Chem. Commun., 60, 5590-5593 (Apr 22, 2024)
DOI: 10.1039/D3CC05985E

Charlie Duclut, Stefano Bo, Ruben Lier, Jay Armas, Piotr Surówka, Frank Jülicher
Probe particles in odd active viscoelastic fluids: How activity and dissipation determine linear stability
Phys. Rev. E 109, 044126 (Apr 10, 2024)
DOI: 10.1103/PhysRevE.109.044126

Neha Pincha Shroff, Pengfei Xu, Sangwoo Kim, Elijah R Shelton, Ben J Gross, Yucen Liu, Carlos O Gomez, Qianlin Ye, Tingsheng Yu Drennon, Jimmy K Hu, Jeremy BA Green, Otger Campàs*, Ophir D Klein*
Proliferation-driven mechanical compression induces signalling centre formation during mammalian organ development
Nature Cell Biology 26, 519–529 (Apr 3, 2024)
* co-corresponding authors
DOI: 10.1038/s41556-024-01380-4

Otger Campàs*, Ivar Noordstra, Alpha S. Yap*
Adherens junctions as molecular regulators of emergent tissue mechanics
Nat Rev Mol Cell Biol 25(4):252–269 (Apr 2024)
* co-corresponding authors
DOI: 10.1038/s41580-023-00688-7

Bethan Clark, Aaron Hickey, Aleksandra Marconi, Bettina Fischer, Joel Elkin, Rita Mateus, M. Emília Santos
Developmental plasticity and variability in the formation of egg-spots, a pigmentation ornament in the cichlid Astatotilapia calliptera
Evolution & Development, 26, e12475 (Mar 30, 2024)
DOI: 10.1111/ede.12475

Maja Illig, Kevin Jahnke, Lukas P Weise, Marlene Scheffold, Ulrike Mersdorf, Hauke Drechsler, Yixin Zhang, Stefan Diez, Jan Kierfeld, Kerstin Göpfrich
Triggered contraction of self-assembled micron-scale DNA nanotube rings
Nat Commun 15(1):2307 (Mar 14, 2024)
DOI: 10.1038/s41467-024-46339-z

Ivan Mestres, Azra Atabay, Joan-Carles Escolano, Solveig Arndt, Klara Schmidtke, Maximilian Einsiedel, Melina Patsonis, Lizbeth Airais Bolaños-Castro, Maximina Yun, Nadine Bernhardt, Anna Taubenberger, Federico Calegari
Manipulation of the nuclear envelope-associated protein SLAP during mammalian brain development affects cortical lamination and exploratory behavior
Biol Open 1;13(3):bio060359 (Mar 11, 2024)
DOI: 10.1242/bio.060359

Christina Kurzthaler, Danielle L. Chase, Howard A. Stone
Surface corrugations induce helical near-surface flows and transport in microfluidic channels
Journal of Fluid Mechanics. 982:A31 (Mar 11, 2024)
DOI: 10.1017/jfm.2024.106

Tina Helmecke, Dominik Hahn, André Ruland, Mikhail V. Tsurkan, Manfred F. Maitz, Carsten Werner
Adsorbed polymer conjugates to adaptively inhibit blood coagulation activation by medical membranes
Journal of Controlled Release 368:344–354 (Mar 6, 2024)
DOI: 10.1016/j.jconrel.2024.02.034

Federico Biavati, Luca Saba, Melinda Boussoussou, Klaus F. Kofoed, Theodora Benedek, Patrick Donnelly, José Rodríguez-Palomares, Andrejs Erglis, Cyril Štěchovský, Gintarė Šakalytė, Nada Čemerlić Ađić, Matthias Gutberlet, Jonathan D. Dodd, Ignacio Diez, Gershan Davis, Elke Zimmermann, Cezary Kępka, Radosav Vidakovic, Marco Francone, Małgorzata Ilnicka-Suckiel, Fabian Plank, Juhani Knuuti, Rita Faria, Stephen Schröder, Colin Berry, Balazs Ruzsics, Nina Rieckmann, Christine Kubiak, Kristian Schultz Hansen, Jacqueline Müller-Nordhorn, Pál Maurovich-Horvat, Per E. Sigvardsen, Imre Benedek, Clare Orr, Filipa Xavier Valente, Ligita Zvaigzne, Vojtěch Suchánek, Antanas Jankauskas, Filip Ađić, Michael Woinke, Diarmaid Cadogan, Iñigo Lecumberri, Erica Thwaite, Mariusz Kruk, Aleksandar N. Neskovic, Massimo Mancone, Donata Kuśmierz, Gudrun Feuchtner, Mikko Pietilä, Vasco Gama Ribeiro, Tanja Drosch, Christian Delles, Riccardo Cau, Michael Fisher, Bela Merkely, Charlotte Kragelund, Rosca Aurelian, Stephanie Kelly, Bruno García del Blanco, Ainhoa Rubio, Bálint Szilveszter, Jens D. Hove, Ioana Rodean, Susan Regan, Hug Cuéllar Calabria, István Ferenc Édes, Linnea Larsen, Roxana Hodas, Adriane E. Napp, Robert Haase, Sarah Feger, Mahmoud Mohamed, Lina M. Serna-Higuita, Konrad Neumann, Henryk Dreger, Matthias Rief, Viktoria Wieske, Matthew J. Budoff, Melanie Estrella, Peter Martus, Maria Bosserdt, Marc Dewey
Coronary Artery Calcium Score Predicts Major Adverse Cardiovascular Events in Stable Chest Pain
Radiology 310(3) (Mar 5, 2024)
DOI: 10.1148/radiol.231557

Felix Horst, Elisabeth Bodenstein, Michael Brand, Stefan Hans, Leonhard Karsch, Elisabeth Lessmann, Steffen Löck, Michael Schürer, Jörg Pawelke, Elke Beyreuther
Dose and dose rate dependence of the tissue sparing effect at ultra-high dose rate studied for proton and electron beams using the zebrafish embryo model
Radiother Oncol. 194:110197. (online: Mar 5, 2024)
DOI: 10.1016/j.radonc.2024.110197

Rhandrey Maestri, Subhadrakutty Radhakrishnakumar, Florian Bürkle, Wei Ding, Lars Büttner, Jürgen Czarske, Uwe Hampel, Gregory Lecrivain
Equilibrium Taylor bubble in a narrow vertical tube with constriction
Physics of Fluids 36(3) (Mar 4, 2024)
DOI: 10.1063/5.0180157

Dinesh Sundaravadivelu Devarajan, Jiahui Wang, Beata Szała-Mendyk, Shiv Rekhi, Arash Nikoubashman, Young C. Kim, Jeetain Mittal
Sequence-dependent material properties of biomolecular condensates and their relation to dilute phase conformations
Nat Commun 15(1), 1912 (Mar 1, 2024)
DOI: 10.1038/s41467-024-46223-w

Volodymyr Prokopets, Sebastian Götz, Uwe Aßmann, Christian Gutsche, Atul Anantheswar, Ines Wollny, Jerome Thiessat, Juliana Hildebrandt, Michael Kaliske, Wolfgang Lehner
Work in Progress: Towards a Single Underlying Model for the Digital Twin of Future Road Infrastructures
2023 IEEE Smart World Congress (SWC) (Mar 1, 2024)
DOI: 10.1109/swc57546.2023.10449106

Laura Meißner, Lukas Niese, Irene Schüring, Aniruddha Mitra, Stefan Diez
Human kinesin-5 KIF11 drives the helical motion of anti-parallel and parallel microtubules around each other
EMBO J 43:1244–1256 (Feb 29, 2024)
DOI: 10.1038/s44318-024-00048-x

Iaroslav Babenko, Nils Kröger, Benjamin M. Friedrich
Mechanism of branching morphogenesis inspired by diatom silica formation
PNAS 121(10) e2309518121 (Feb 29, 2024)
DOI: 10.1073/pnas.2309518121

Andreas Müller, Deborah Schmidt, Jan Philipp Albrecht, Lucas Rieckert, Maximilian Otto, Leticia Elizabeth Galicia Garcia, Gunar Fabig, Michele Solimena, Martin Weigert
Modular segmentation, spatial analysis and visualization of volume electron microscopy datasets
Nat Protoc 19(5):1436–1466 (Feb 29, 2024)
DOI: 10.1038/s41596-024-00957-5

Connor A. Schmidt, Eric Tambutté, Alexander A. Venn, Zhaoyong Zou, Cristina Castillo Alvarez, Laurent S. Devriendt, Hans A. Bechtel, Cayla A. Stifler, Samantha Anglemyer, Carolyn P. Breit, Connor L. Foust, Andrii Hopanchuk, Connor N. Klaus, Isaac J. Kohler, Isabelle M. LeCloux, Jaiden Mezera, Madeline R. Patton, Annie Purisch, Virginia Quach, Jaden S. Sengkhammee, Tarak Sristy, Shreya Vattem, Evan J. Walch, Marie Albéric, Yael Politi, Peter Fratzl, Sylvie Tambutté, Pupa U.P.A. Gilbert
Myriad Mapping of nanoscale minerals reveals calcium carbonate hemihydrate in forming nacre and coral biominerals
Nat Commun 15(1), 1812 (Feb 28, 2024)
DOI: 10.1038/s41467-024-46117-x

Martin Neukam, Pia Sala, Andreas-David Brunner, Katharina Ganß, Alessandra Palladini, Michal Grzybek, Oleksandra Topcheva, Jovana Vasiljević, Johannes Broichhagen, Kai Johnsson, Thomas Kurth, Matthias Mann, Ünal Coskun, Michele Solimena
Purification of time-resolved insulin granules reveals proteomic and lipidomic changes during granule aging
Cell Reports 43(3):113836 (Feb 27, 2024)
DOI: 10.1016/j.celrep.2024.113836

Cedric Landerer, Jonas Poehls, Agnes Toth-Petroczy
Fitness Effects of Phenotypic Mutations at Proteome-Scale Reveal Optimality of Translation Machinery
Molecular Biology and Evolution 41(3) (Feb 27, 2024)
DOI: 10.1093/molbev/msae048

Stefan Golfier, Thomas Quail, Jan Brugués
Single-Molecule Approaches to Study DNA Condensation
Castro, A., Lacroix, B. (eds) Cell Cycle Control. Methods in Molecular Biology, vol 2740. Humana, New York, NY (Feb 24, 2024)
DOI: 10.1007/978-1-0716-3557-5_1

A. Emile J. Hendriks, M. Loredana Marcovecchio, Rachel E. J. Besser, Ezio Bonifacio, Kristina Casteels, Helena Elding Larsson, Gita Gemulla, Markus Lundgren, Olga Kordonouri, Roberto Mallone, Flemming Pociot, Agnieszka Szypowska, Jorma Toppari, Thekla von dem Berge, Anette G. Ziegler, Chantal Mathieu, Peter Achenbach
Clinical care advice for monitoring of islet autoantibody positive individuals with presymptomatic type 1 diabetes
Diabetes Metabolism Res 40(2) (Feb 20, 2024)
DOI: 10.1002/dmrr.3777

Nishant Kumar, Lukas Krause, Thomas Wondrak, Sven Eckert, Kerstin Eckert, Stefan Gumhold
Robust Reconstruction of the Void Fraction from Noisy Magnetic Flux Density Using Invertible Neural Networks
Sensors 24(4):1213 (Feb 14, 2024)
DOI: 10.3390/s24041213

Lea Happel, Axel Voigt
Coordinated Motion of Epithelial Layers on Curved Surfaces
Phys. Rev. Lett. 132, 078401 (Feb 13, 2024)
DOI: 10.1103/PhysRevLett.132.078401

Nagaraja Chappidi, Thomas Quail, Simon Doll, Laura T. Vogel, Radoslav Aleksandrov, Suren Felekyan, Ralf Kühnemuth, Stoyno Stoynov, Claus A.M. Seidel, Jan Brugués, Marcus Jahnel, Titus M. Franzmann, Simon Alberti
PARP1-DNA co-condensation drives DNA repair site assembly to prevent disjunction of broken DNA ends
Cell 187(4):945–961.e18 (Feb 5, 2024)
DOI: 10.1016/j.cell.2024.01.015

Liliya Mukhametzyanova, Lukas Theo Schmitt, Julia Torres-Rivera, Teresa Rojo-Romanos, Felix Lansing, Maciej Paszkowski-Rogacz, Heike Hollak, Melanie Brux, Martina Augsburg, Paul Martin Schneider, Frank Buchholz
Activation of recombinases at specific DNA loci by zinc-finger domain insertions
Nat Biotechnol (online: Jan 31, 2024)
DOI: 10.1038/s41587-023-02121-y

Erik Kalz, Hidde Derk Vuijk, Jens-Uwe Sommer, Ralf Metzler, Abhinav Sharma
Oscillatory Force Autocorrelations in Equilibrium Odd-Diffusive Systems
Phys. Rev. Lett. 132(5), 057102 (Jan 31, 2024)
DOI: 10.1103/physrevlett.132.057102

Tijue Wang, Jakob Dremel, Sven Richter, Witold Polanski, Ortrud Uckermann, Ilker Eyüpoglu, Jürgen W. Czarske, Robert Kuschmierz
Resolution-enhanced multi-core fiber imaging learned on a digital twin for cancer diagnosis
Neurophoton. 11(S1) S11505 (Jan 31, 2024)
DOI: 10.1117/1.nph.11.s1.s11505

Kathrin Schmeisser, Damla Kaptan, Bharath Kumar Raghuraman, Andrej Shevchenko, Jonathan Rodenfels, Sider Penkov, Teymuras V. Kurzchalia
Mobilization of cholesterol induces the transition from quiescence to growth in Caenorhabditis elegans through steroid hormone and mTOR signaling
Commun Biol 7(1), 121 (Jan 24, 2024)
DOI: 10.1038/s42003-024-05804-7

K. Yanín Guerra Santillán, Christian Dahmann, Elisabeth Fischer-Friedrich
Elastic Contractile Stress in the Basement Membrane Generates Basal Tension in Epithelia
PRX Life 2, 013004 (Jan 23, 2024)
DOI: 10.1103/PRXLife.2.013004

Michael Nestler, Simon Praetorius, Zhi-Feng Huang, Hartmut Löwen, Axel Voigt
Active smectics on a sphere
J. Phys.: Condens. Matter 36(18):185001 (Jan 23, 2024)
DOI: 10.1088/1361-648x/ad21a7

Richard Nauber, Lars Büttner, Jürgen Czarske
Special Issue on Computational Ultrasound Imaging and Applications
Applied Sciences 14(3):964 (Jan 23, 2024)
DOI: 10.3390/app14030964

Alexandra Meliou, Sourav Bhowmick, Karl Aberer, Divy Agrawal, Angela Bonifati, Vanessa Braganholo, Floris Geerts, Wolfgang Lehner, Divesh Srivastava
Peer-Reviewing Processes and Incentives: Data Management Community Survey Results
SIGMOD Rec. 52(4):41–46 (Jan 20, 2024)
DOI: 10.1145/3641832.3641844

Priyanka Bhatia, Marc Bickle, Amay A. Agrawal, Buster Truss, Aikaterina Nikolaidi, Kathrin Brockmann, Lydia Reinhardt, Stefanie Vogel, Eva M. Szegoe, Arun Pal, Andreas Hermann, Ivan Mikicic, Maximina Yun, Björn Falkenburger, Jared Sterneckert
Axonal Lysosomal Assays for Characterizing the Effects of LRRK2 G2019S
Biology (Basel) 13(1):58 (Jan 20, 2024)
DOI: 10.3390/biology13010058

Marietta Döring, Melanie Brux, Maciej Paszkowski-Rogacz, Pedro M Guillem-Gloria, Frank Buchholz, M Teresa Pisabarro, Mirko Theis
Nucleolar protein TAAP1/C22orf46confers pro-survival signaling in non-small cell lung cancer
Life Sci. Alliance 7(4):e202302257 (Jan 16, 2024)
DOI: 10.26508/lsa.202302257

Francine Kolley, Clara Sidor, Benoit Dehapiot, Frank Schnorrer, Benjamin M. Friedrich
Mechanisms of Sarcomere Assembly in Muscle Cells Inferred from Sequential Ordering of Myofibril Components
PRX Life 2(1), 013002 (Jan 11, 2024)
DOI: 10.1103/PRXLife.2.013002

Aaron D. Wolfe, John N. Koberstein, Chadwick B. Smith, Melissa L. Stewart, Ian J. Gonzalez, Marc Hammarlund, Anthony A. Hyman, Philip J. S. Stork, Richard H. Goodman, Daniel A. Colón-Ramos
Local and dynamic regulation of neuronal glycolysis in vivo
Proc. Natl. Acad. Sci. U.S.A. 121(3) (Jan 10, 2024)
DOI: 10.1073/pnas.2314699121

Jorge Lázaro, Jaroslaw Sochacki, Miki Ebisuya
The stem cell zoo for comparative studies of developmental tempo
Current Opinion in Genetics & Development 84:102149 (Jan 9, 2024)
DOI: 10.1016/j.gde.2023.102149

Jiawei Sun, Bin Zhao, Dong Wang, Zhigang Wang, Jie Zhang, Nektarios Koukourakis, Júergen W. Czarske, Xuelong Li
Calibration-free quantitative phase imaging in multi-core fiber endoscopes using end-to-end deep learning
Opt. Lett. 49(2):342 (Jan 5, 2024)
DOI: 10.1364/ol.509772

Laura K. Wiley, Jonathan A. Shortt, Emily R. Roberts, Jan Lowery, Elizabeth Kudron, Meng Lin, David Mayer, Melissa Wilson, Tonya M. Brunetti, Sameer Chavan, Tzu L. Phang, Nikita Pozdeyev, Joseph Lesny, Stephen J. Wicks, Ethan T. Moore, Joshua L. Morgenstern, Alanna N. Roff, Elise L. Shalowitz, Adrian Stewart, Cole Williams, Michelle N. Edelmann, Madelyne Hull, J. Tacker Patton, Lisen Axell, Lisa Ku, Yee Ming Lee, Jean Jirikowic, Anna Tanaka, Emily Todd, Sarah White, Brett Peterson, Emily Hearst, Richard Zane, Casey S. Greene, Rasika Mathias, Marilyn Coors, Matthew Taylor, Debashis Ghosh, Michael G. Kahn, Ian M. Brooks, Christina L. Aquilante, David Kao, Nicholas Rafaels, Kristy R. Crooks, Steve Hess, Kathleen C. Barnes, Christopher R. Gignoux
Building a vertically integrated genomic learning health system: The biobank at the Colorado Center for Personalized Medicine
The American Journal of Human Genetics 111(1):11–23 (Jan 4, 2024)
DOI: 10.1016/j.ajhg.2023.12.001

Jiawei Sun, Bin Yang, Nektarios Koukourakis, Jochen Guck, Juergen W. Czarske
AI-driven projection tomography with multicore fibre-optic cell rotation
Nat Commun 15(1), 147 (Jan 2, 2024)
DOI: 10.1038/s41467-023-44280-1

2023

228 publication(s) listed

Dennis Pohle, Fabio A. Barbosa, Filipe M. Ferreira, Stefan Rothe, Juergen W Czarske
Digital few-mode fiber multiplexer using multiplane light conversion
2023 IEEE Photonics Conference (IPC) (Dec 25, 2023)
DOI: 10.1109/ipc57732.2023.10360545

Qian Zhang, Yuan Sui, Stefan Rothe, Jürgen Czarske
Physics-informed mode decomposition neural network for structured light in multimode fibers
2023 IEEE Photonics Conference (IPC) (Dec 25, 2023)
DOI: 10.1109/ipc57732.2023.10360643

T.‐Y. Dora Tang, Xin Huang
Artificial Cells: From Basic Assembly to Directed Functionality
Small Methods 7(12) (Dec 23, 2023)
DOI: 10.1002/smtd.202301446

Elena Bachini, Veit Krause, Ingo Nitschke, Axel Voigt
Derivation and simulation of a two-phase fluid deformable surface model
Journal of Fluid Mechanics 977:A41 (Dec 21, 2023)
DOI: 10.1017/jfm.2023.943

Romina Piscitello-Gómez, Franz S Gruber, Abhijeet Krishna, Charlie Duclut, Carl D Modes, Marko Popović, Frank Jülicher, Natalie A Dye, Suzanne Eaton
Core PCP mutations affect short-time mechanical properties but not tissue morphogenesis in the Drosophila pupal wing
eLife 12:e85581 (Dec 20, 2023)
DOI: 10.7554/eLife.85581

Piotr Surówka, Anton Souslov, Frank Jülicher, Debarghya Banerjee
Odd Cosserat Elasticity in Active Materials
Phys. Rev. E 108, 064609 (Dec 15, 2023)
DOI: 10.1103/PhysRevE.108.064609

Katarzyna P. Adamala, Marileen Dogterom, Yuval Elani, Petra Schwille, Masahiro Takinoue, T-Y Dora Tang
Present and future of synthetic cell development
Nat Rev Mol Cell Biol 25(3):162–167 (Dec 15, 2023)
DOI: 10.1038/s41580-023-00686-9

Jonathan Bauermann, Giacomo Bartolucci, Job Boekhoven, Christoph A. Weber, Frank Jülicher
Formation of Liquid Shells in Active Droplet systems
Phys. Rev. Research 5, 043246 (Dec 14, 2023)
DOI: 10.1103/PhysRevResearch.5.043246

Adrian Pascal Nievergelt, Dennis Ray Diener, Aliona Bogdanova, Thomas Brown, Gaia Pigino
Protocol for precision editing of endogenous Chlamydomonas reinhardtii genes with CRISPR-Cas
STAR Protocols 5(1):102774 (Dec 13, 2023)
DOI: 10.1016/j.xpro.2023.102774

Dennis Pohle, Fabio A. Barbosa, Filipe M. Ferreira, Stefan Rothe, Juergen W Czarske
Smart few-mode fiber multiplexer using multiplane light conversion
Frontiers in Optics + Laser Science 2023 (FiO, LS) (Dec 11, 2023)
DOI: 10.1364/fio.2023.fm1c.3

Qian Zhang, Yuan Sui, Stefan Rothe, Jürgen W. Czarske
Learning to demultiplex the superposition of spatial modes in multimode fiber using physics-informed deep learning
Frontiers in Optics + Laser Science 2023 (FiO, LS) (Dec 11, 2023)
DOI: 10.1364/fio.2023.ftu1d.3

Lars Büttner, Zeyu Gao, Ping Yang, Clemens Bilsing, Jürgen Czarske
Distortion Correction for Imaging Using a Wavefront Sensing Based Multiple-Input Deep Neural Network
Optica Imaging Congress (3D, COSI, DH, FLatOptics, IS, pcAOP) (Nov 29, 2023)
DOI: 10.1364/cosi.2023.ctu3b.4

Elias Scharf, Ronja Stephan, Kinga Zolnacz, Michael Steinke, Robert Kuschmierz, Juergen Czarske
Lensless Single-Shot Endoscopy with Needle-Thin Multicore Fiber Bundles enabled by 2PP 3D Printing on the Fiber Tip
Optica Imaging Congress (3D, COSI, DH, FLatOptics, IS, pcAOP) (Nov 29, 2023)
DOI: 10.1364/isa.2023.im3e.2

Josefine Metzkes-Ng, Florian-Emanuel Brack, Florian Kroll, Constantin Bernert, Stefan Bock, Elisabeth Bodenstein, Michael Brand, Thomas E. Cowan, René Gebhardt, Stefan Hans, Uwe Helbig, Felix Horst, Jeannette Jansen, Stephan D. Kraft, Mechthild Krause, Elisabeth Leßmann, Steffen Löck, Jörg Pawelke, Thomas Püschel, Marvin Reimold, Martin Rehwald, Christian Richter, Hans-Peter Schlenvoigt, Ulrich Schramm, Michael Schürer, Joao Seco, Emília Rita Szabó, Marvin E. P. Umlandt, Karl Zeil, Tim Ziegler, Elke Beyreuther
The DRESDEN PLATFORM is a research hub for ultra-high dose rate radiobiology
Sci Rep 13(1):20611 (Nov 23, 2023)
DOI: 10.1038/s41598-023-46873-8

Joseph L. Watson, Estere Seinkmane, Christine T. Styles, Andrei Mihut, Lara K. Krüger, Kerrie E. McNally, Vicente Jose Planelles-Herrero, Michal Dudek, Patrick M. McCall, Silvia Barbiero, Michael Vanden Oever, Sew Yeu Peak-Chew, Benjamin T. Porebski, Aiwei Zeng, Nina M. Rzechorzek, David C. S. Wong, Andrew D. Beale, Alessandra Stangherlin, Margot Riggi, Janet Iwasa, Jörg Morf, Christos Miliotis, Alina Guna, Alison J. Inglis, Jan Brugués, Rebecca M. Voorhees, Joseph E. Chambers, Qing-Jun Meng, John S. O’Neill, Rachel S. Edgar, Emmanuel Derivery
Macromolecular condensation buffers intracellular water potential
Nature 623, 842–852 (Nov 23, 2023)
DOI: 10.1038/s41586-023-06626-z

Massimo Mancone, Aldo J. Vázquez Mézquita, Lucia Ilaria Birtolo, Pal Maurovich-Horvat, Klaus F. Kofoed, Theodora Benedek, Patrick Donnelly, Jose Rodriguez-Palomares, Andrejs Erglis, Cyril Štěchovský, Gintare Šakalytė, Nada Čemerlić Ađić, Matthias Gutberlet, Ignacio Diez, Gershan Davis, Elke Zimmermann, Cezary Kępka, Radosav Vidakovic, Marco Francone, Małgorzata Ilnicka-Suckiel, Fabian Plank, Juhanni Knuuti, Rita Faria, Stephen Schröder, Colin Berry, Luca Saba, Balazs Ruzsics, Nina Rieckmann, Christine Kubiak, Kristian Schultz Hansen, Jaqueline Müller-Nordhorn, Bela Merkely, Per E. Sigvardsen, Imre Benedek, Clare Orr, Filipa Xavier Valente, Ligita Zvaigzne, Vojtěch Suchánek, Antanas Jankauskas, Filip Ađić, Michael Woinke, Stephen Keane, Ignacio Lecumberri, Erica Thwaite, Mariusz Kruk, Vladimir Jovanovic, Donata Kuśmierz, Gudren Feuchtner, Mikko Pietilä, Vasco Gama Ribeiro, Tanja Drosch, Christian Delles, Vitanio Palmisano, Michael Fisher, Zsófia D. Drobni, Charlotte Kragelund, Rosca Aurelian, Stephanie Kelly, Bruno Garcia del Blanco, Ainhoa Rubio, Melinda Boussoussou, Jens D. Hove, Ioana Rodean, Susan Regan, Hug Cuéllar Calabria, Dávid Becker, Linnea Larsen, Roxana Hodas, Adriane E. Napp, Robert Haase, Sarah Feger, Mahmoud Mohamed, Konrad Neumann, Henryk Dreger, Matthias Rief, Viktoria Wieske, Pamela S. Douglas, Melanie Estrella, Maria Bosserdt, Peter Martus, Lina M. Serna-Higuita, Jonathan D. Dodd, Marc Dewey
Impact of smoking in patients with suspected coronary artery disease in the randomised DISCHARGE trial
Eur Radiol 34(6):4127–4141 (Nov 22, 2023)
DOI: 10.1007/s00330-023-10355-2

Laura Celotto, Fabian Rost, Anja Machate, Juliane Bläsche, Andreas Dahl, Anke Weber, Stefan Hans, Michael Brand
Single-cell RNA sequencing unravels the transcriptional network underlying zebrafish retina regeneration
eLife 12:RP86507 (Nov 21, 2023)
DOI: 10.7554/eLife.86507.3

Ashwin I. D’Souza, Rahul Grover, Gina A. Monzon, Ludger Santen, Stefan Diez
Vesicles driven by dynein and kinesin exhibit directional reversals without regulators
Nat Commun 14, 7532 (Nov 20, 2023)
DOI: 10.1038/s41467-023-42605-8

Qinghao Yu, Hannah E Walters, Giovanni Pasquini, Sumeet Pal Singh, Martina Lachnit, Catarina R Oliveira, Daniel León-Periñán, Andreas Petzold, Preethi Kesavan, Cristina Subiran Adrados, Ines Garteizgogeascoa, Dunja Knapp, Anne Wagner, Andrea Bernardos, María Alfonso, Gayathri Nadar, Alwin M Graf, Konstantin E Troyanovskiy, Andreas Dahl, Volker Busskamp, Ramón Martínez-Máñez, Maximina H Yun
Cellular senescence promotes progenitor cell expansion during axolotl limb regeneration
Dev Cell 58(22):2416-2427.e7 (Nov 20, 2023)
DOI: 10.1016/j.devcel.2023.09.009

Lucas Woltmann, Jonas Deepe, Claudio Hartmann, Wolfgang Lehner
evalPM: a framework for evaluating machine learning models for particulate matter prediction
Environ Monit Assess 195(12), 1491 (Nov 18, 2023)
DOI: 10.1007/s10661-023-11996-y

Archit Bhatnagar, Michael Nestler, Peter Gross, Mirna Kramar, Mark Leaver, Axel Voigt, Stephan W. Grill
Axis convergence in C. elegans embryos
Current Biology 33, 1–13 (Nov 17, 2023)
DOI: 10.1016/j.cub.2023.10.050

Zehua Dou, Laura Tropf, Harry Hoster, Hagen Schmidt, Juergen Czarske, David Weik
Advanced Ultrasonic Diagnostic Technology Towards Green Hydrogen Energy Systems
2023 IEEE International Ultrasonics Symposium (IUS) (Nov 7, 2023)
DOI: 10.1109/ius51837.2023.10307141

Lukas Theo Schmitt, Aksana Schneider, Jonas Posorski, Felix Lansing, Milica Jelicic, Manavi Jain, Shady Sayed, Frank Buchholz, Duran Sürün
Quantification of evolved DNA-editing enzymes at scale with DEQSeq
Genome Biol 24(1), 254 (Nov 6, 2023)
DOI: 10.1186/s13059-023-03097-3

Mengfei Gao, Dishi Wang, Michaela Wilsch‐Bräuninger, Weihua Leng, Jonathan Schulte, Nina Morgner, Dietmar Appelhans, T‐Y. Dora Tang
Cell Free Expression in Proteinosomes Prepared from Native Protein‐PNIPAAm Conjugates
Macromolecular Bioscience 24(3) (Nov 5, 2023)
DOI: 10.1002/mabi.202300464

Zehua Dou, Bowen Fang, Laura Tropf, Harry Hoster, Hagen Schmidt, Jürgen Czarske, David Weik
A Water Monitoring System for Proton Exchange Membrane Fuel Cells Based on Ultrasonic Lamb Waves: An Ex Situ Proof of Concept
IEEE Trans. Instrum. Meas. 72:1–12 (Nov 3, 2023)
DOI: 10.1109/tim.2023.3329101

Mansi Gupta, Thomas Kurth, Fabian Heinemann, Petra Schwille, Sebastian Keil, Franziska Knopf, Michael Brand
Fine-tuning of Fgf8 morphogen gradient by heparan sulfate proteoglycans in the extracellular matrix
bioRxiv 2023.11.02.565243 (Nov 2, 2023)
DOI: 10.1101/2023.11.02.565243

Antoine Vian, Marie Pochitaloff, Shuo-Ting Yen, Sangwoo Kim, Jennifer Pollock, Yucen Liu, Ellen M. Sletten, Otger Campàs*
In situ quantification of osmotic pressure within living embryonic tissues
Nat Commun 14(1), 7023 (Nov 2, 2023)
* corresponding author
DOI: 10.1038/s41467-023-42024-9

Aboutaleb Amiri, Charlie Duclut, Frank Jülicher, Marko Popović
Random Traction Yielding Transition in Epithelial Tissues
Phys. Rev. Lett. 131, 188401 (Oct 30, 2023)
DOI: 10.1103/PhysRevLett.131.188401

Max Korn, Julián Méndez, Sascha Klüppelholz, Ricardo Langner, Christel Baier, Raimund Dachselt
PMC-VIS: An Interactive Visualization Tool for Probabilistic Model Checking
Lecture Notes in Computer Science 361–375 (Oct 30, 2023)
DOI: 10.1007/978-3-031-47115-5_20

Zheng Shen, Daxiao Sun, Adriana Savastano, Sára Joana Varga, Maria-Sol Cima-Omori, Stefan Becker, Alf Honigmann, Markus Zweckstetter
Multivalent Tau/PSD-95 interactions arrest in vitro condensates and clusters mimicking the postsynaptic density
Nat Commun 14(1), 6839 (Oct 27, 2023)
DOI: 10.1038/s41467-023-42295-2

Dennis Schifferl, Manuela Scholze-Wittler, Alba Villaronga Luque, Milena Pustet, Lars Wittler, Jesse V. Veenvliet, Frederic Koch, Bernhard G. Herrmann
Genome-wide identification of notochord enhancers comprising the regulatory landscape of the brachyury locus in mouse
Development 150(22) (Oct 26, 2023)
DOI: 10.1242/dev.202111

Cheng-Wu Li, Holger Merlitz, Jens-Uwe Sommer
Scaling Behaviors of Nanoparticle Clusters That Are Driven through Brush-Decorated Nanopores
Macromolecules 56(21):8710–8720 (Oct 25, 2023)
DOI: 10.1021/acs.macromol.3c01762

Shivraj B. Kotkar, Michael P. Howard, Arash Nikoubashman, Jacinta C. Conrad, Ryan Poling-Skutvik, Jeremy C. Palmer
Confined Dynamics in Spherical Polymer Brushes
ACS Macro Lett. 12(11):1503–1509 (Oct 25, 2023)
DOI: 10.1021/acsmacrolett.3c00505

Ashley T. Sendell-Price, Frank J. Tulenko, Mats Pettersson, Du Kang, Margo Montandon, Sylke Winkler, Kathleen Kulb, Gavin P. Naylor, Adam Phillippy, Olivier Fedrigo, Jacquelyn Mountcastle, Jennifer R. Balacco, Amalia Dutra, Rebecca E. Dale, Bettina Haase, Erich D. Jarvis, Gene Myers, Shawn M. Burgess, Peter D. Currie, Leif Andersson, Manfred Schartl
Low mutation rate in epaulette sharks is consistent with a slow rate of evolution in sharks
Nat Commun 14(1), 6628 (Oct 19, 2023)
DOI: 10.1038/s41467-023-42238-x

Jiahui Wang, Dinesh Sundaravadivelu Devarajan, Arash Nikoubashman, Jeetain Mittal
Conformational Properties of Polymers at Droplet Interfaces as Model Systems for Disordered Proteins
ACS Macro Letters, Vol 12/Issue 11 (Oct 19, 2023)
DOI: 10.1021/acsmacrolett.3c00456

Tom Glosemeyer, Julian Lich, Robert Kuschmierz, Jürgen Czarske
Diffuser-based fiber endoscopy for single-shot 3D fluorescence imaging
EPJ Web Conf. 287:03013 (Oct 18, 2023)
DOI: 10.1051/epjconf/202328703013

Cassie L. Kemmler, Jana Smolikova, Hannah R. Moran, Brandon J. Mannion, Dunja Knapp, Fabian Lim, Anna Czarkwiani, Viviana Hermosilla Aguayo, Vincent Rapp, Olivia E. Fitch, Seraina Bötschi, Licia Selleri, Emma Farley, Ingo Braasch, Maximina Yun, Axel Visel, Marco Osterwalder, Christian Mosimann, Zbynek Kozmik, Alexa Burger
Conserved enhancers control notochord expression of vertebrate Brachyury
Nat Commun 14(1):6594 (Oct 18, 2023)
DOI: 10.1038/s41467-023-42151-3

Alexander M. Bergmann, Jonathan Bauermann, Giacomo Bartolucci, Carsten Donau, Michele Stasi, Anna-Lena Holtmannspötter, Frank Jülicher, Christoph A. Weber, Job Boekhoven
Liquid spherical shells are a non-equilibrium steady state of active droplets
Nat Commun 14(1), 6552 (Oct 17, 2023)
DOI: 10.1038/s41467-023-42344-w

Andreas Hartmann, Koushik Sreenivasa, Mathias Schenkel, Neharika Chamachi, Philipp Schake, Georg Krainer, Michael Schlierf
An automated single-molecule FRET platform for high-content, multiwell plate screening of biomolecular conformations and dynamics
Nat Commun 14, 6511 (Oct 16, 2023)
DOI: 10.1038/s41467-023-42232-3

Mahmoud Mohamed, Maria Bosserdt, Viktoria Wieske, Benjamin Dubourg, Hatem Alkadhi, Mario J. Garcia, Sebastian Leschka, Elke Zimmermann, Abbas A. Shabestari, Bjarne L. Nørgaard, Matthijs F. L. Meijs, Kristian A. Øvrehus, Axel C. P. Diederichsen, Juhani Knuuti, Bjørn A. Halvorsen, Vladymir Mendoza-Rodriguez, Yung-Liang Wan, Nuno Bettencourt, Eugenio Martuscelli, Ronny R. Buechel, Hans Mickley, Kai Sun, Simone Muraglia, Philipp A. Kaufmann, Bernhard A. Herzog, Jean-Claude Tardif, Georg M. Schütz, Michael Laule, David E. Newby, Stephan Achenbach, Matthew Budoff, Robert Haase, Federico Biavati, Aldo Vásquez Mézquita, Peter Schlattmann, Marc Dewey
Combination of computed tomography angiography with coronary artery calcium score for improved diagnosis of coronary artery disease: a collaborative meta-analysis of stable chest pain patients referred for invasive coronary angiography
Eur Radiol 34(4):2426–2436 (Oct 13, 2023)
DOI: 10.1007/s00330-023-10223-z

Ping Liu, Nils Schumann, Fabian Abele, Fazheng Ren, Marcel Hanke, Yang Xin, Andreas Hartmann, Michael Schlierf, Adrian Keller, Weilin Lin*, Yixin Zhang*
Thermophoretic Analysis of Biomolecules across the Nanoscales in Self-Assembled Polymeric Matrices
ACS Appl. Nano Mater (Oct 10, 2023)
* corresponding authors
DOI: 10.1021/acsanm.3c03623

Andreas Geyer, Johannes Pietrzyk, Alexander Krause, Dirk Habich, Wolfgang Lehner, Christian Färber, Thomas Willhalm
Near to Far: An Evaluation of Disaggregated Memory for In-Memory Data Processing
Proceedings of the 1st Workshop on Disruptive Memory Systems (Oct 10, 2023)
DOI: 10.1145/3609308.3625271

Qian Zhang, Yuan Sui, Dennis Pohle, Nektarios Koukourakis, Jürgen W. Czarske, Stefan Rothe
Reference-less phase retrieval of multimode fibers using a deep neural network
Emerging Topics in Artificial Intelligence (ETAI) 2023 (Oct 5, 2023)
DOI: 10.1117/12.2674072

Jiawei Sun, Nektarios Koukourakis, Juergen W. Czarske
3D cell rotation in multicore fiber-based optical diffraction tomography with isotropic resolution using deep learning
Optical Trapping and Optical Micromanipulation XX (Oct 5, 2023)
DOI: 10.1117/12.2676123

Rohit Krishnan Harish, Mansi Gupta, Daniela Zöller, Hella Hartmann, Ali Gheisari, Anja Machate, Stefan Hans, Michael Brand
Real-time monitoring of an endogenous Fgf8a gradient attests to its role as a morphogen during zebrafish gastrulation
Development 150(19):dev201559 (Oct 3, 2023)
DOI: 10.1242/dev.201559

Clemens Bilsing, Lars Büttner, Sebastian Burgmann, Jürgen W. Czarske
High-speed 3D particle tracking with dynamic aberration correction using a Fresnel guide star
Unconventional Imaging, Sensing, and Adaptive Optics 2023 (Oct 3, 2023)
DOI: 10.1117/12.2675483

Abhinav Singh, Philipp H. Suhrcke, Pietro Incardona, Ivo F. Sbalzarini
A numerical solver for active hydrodynamics in three dimensions and its application to active turbulence
Physics of Fluids 35(10):105155 (Oct 1, 2023)
DOI: 10.1063/5.0169546

Thomas Pinetz, Erich Kobler, Robert Haase, Katerina Deike-Hofmann, Alexander Radbruch, Alexander Effland
Faithful Synthesis of Low-Dose Contrast-Enhanced Brain MRI Scans Using Noise-Preserving Conditional GANs
Lecture Notes in Computer Science 607–617 (Sep 30, 2023)
DOI: 10.1007/978-3-031-43895-0_57

Fang-Chu Lin, Heidi L. van de Wouw, Otger Campàs, Ellen M. Sletten, Jeffrey I. Zink*
Synthesis of Fluorous Ferrofluids and Effects of the Nanoparticle Coatings on Field- and Temperature-Dependent Magnetizations
Chem. Mater. 35(19):7957–7966 (Sep 29, 2023)
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Katharina Schmidt, Ning Guo, Wenjie Wang, Juergen W. Czarske, Nektarios Koukourakis
Chromatic aberration correction using reinforcement learning
Emerging Topics in Artificial Intelligence (ETAI) 2023 (Sep 28, 2023)
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Tijue Wang, Jakob Dremel, Jiachen Wu, Ortrud Uckermann, Roberta Galli, Ilker Eyüpoglu, Jürgen W. Czarske, Robert Kuschmierz
Learning-based lensless fiber bundle imaging with real-time resolution enhancement for biomedicine
Emerging Topics in Artificial Intelligence (ETAI) 2023 (Sep 28, 2023)
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Nektarios Koukourakis, Jiawei Sun, Jürgen W. Czarske
Optical diffraction tomography based on AI-driven adaptive optical cell-rotation
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Guoming Gao, Emily S. Sumrall, Sethuramasundaram Pitchiaya, Markus Bitzer, Simon Alberti, Nils G. Walter
Biomolecular condensates in kidney physiology and disease
Nat Rev Nephrol 19(12):756–770 (Sep 26, 2023)
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Arvid Sandforth, Reiner Jumpertz von Schwartzenberg, Elsa Vazquez Arreola, Robert L Hanson, Gencer Sancar, Sarah Katzenstein, Karl Lange, Hubert Preißl, Simon I Dreher, Cora Weigert, Robert Wagner, Kostantinos Kantartzis, Jürgen Machann, Fritz Schick, Rainer Lehmann, Andreas Peter, Nikoletta Katsouli, Vasilis Ntziachristos, Corinna Dannecker, Louise Fritsche, Nikolaos Perakakis, Martin Heni, Peter Paul Nawroth, Stefan Kopf, Andreas F H Pfeiffer, Stefan Kabisch, Michael Stumvoll, Peter E H Schwarz, Hans Hauner, Andreas Lechner, Jochen Seissler, Iryna Yurchenko, Andrea Icks, Michele Solimena, Hans-Ulrich Häring, Julia Szendroedi, Annette Schürmann, Martin Hrabé de Angelis, Matthias Blüher, Michael Roden, Stefan R Bornstein, Norbert Stefan, Andreas Fritsche, Andreas L Birkenfeld
Mechanisms of weight loss-induced remission in people with prediabetes: a post-hoc analysis of the randomised, controlled, multicentre Prediabetes Lifestyle Intervention Study (PLIS)
The Lancet Diabetes & Endocrinology 11(11):798–810 (Sep 25, 2023)
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Meghali Aich, Asgar Hussain Ansari, Li Ding, Vytautas Iesmantavicius, Deepanjan Paul, Chunaram Choudhary, Souvik Maiti, Frank Buchholz, Debojyoti Chakraborty
TOBF1 modulates mouse embryonic stem cell fate through regulating alternative splicing of pluripotency genes
Cell Reports 42(10):113177 (Sep 25, 2023)
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Jay Gopalakrishnan, Kerstin Feistel, Benjamin M Friedrich, Anne Grapin‐Botton, Nathalie Jurisch‐Yaksi, Elvira Mass, David U Mick, Roman‐Ulrich Müller, Helen May‐Simera, Bernhard Schermer, Miriam Schmidts, Peter Walentek, Dagmar Wachten
Emerging principles of primary cilia dynamics in controlling tissue organization and function
The EMBO Journal 42(21) (Sep 25, 2023)
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Tina Helmecke, Ilka I. Rose, Mikhail V. Tsurkan, Hannah Roth, Manfred F. Maitz, Carsten Werner, Matthias Wessling
Poly(styrene-alt-maleic anhydride)-copolymers blended in poly(ether sulfone) membranes as a platform for effective biomolecular surface functionalization
Journal of Membrane Science 689:122050 (Sep 23, 2023)
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Felix Kramer, Carl D. Modes
Ensnarled: Topological linkage of spatially embedded network pairs
Phys. Rev. Research 5(3), 033203 (Sep 22, 2023)
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Ali Tahaei, Giulio Biroli, Misaki Ozawa, Marko Popović, Matthieu Wyart
Scaling Description of Dynamical Heterogeneity and Avalanches of Relaxation in Glass-Forming Liquids
Phys. Rev. X 13(3), 031034 (Sep 21, 2023)
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Marcel Hanke, Daniel Dornbusch, Emilia Tomm, Guido Grundmeier, Karim Fahmy, Adrian Keller
Superstructure-dependent stability of DNA origami nanostructures in the presence of chaotropic denaturants
Nanoscale 15(41):16590–16600 (Sep 19, 2023)
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Theodora Benedek, Viktoria Wieske, Bálint Szilveszter, Klaus F. Kofoed, Patrick Donnelly, José Rodriguez-Palomares, Andrejs Erglis, Josef Veselka, Gintarė Šakalytė, Nada Čemerlić Ađić, Matthias Gutberlet, Ignacio Diez, Gershan Davis, Elke Zimmermann, Cezary Kępka, Radosav Vidakovic, Marco Francone, Małgorzata Ilnicka-Suckiel, Fabian Plank, Juhani Knuuti, Rita Faria, Stephen Schröder, Colin Berry, Luca Saba, Balazs Ruzsics, Nina Rieckmann, Christine Kubiak, Kristian Schultz Hansen, Jacqueline Müller-Nordhorn, Bela Merkely, Per E. Sigvardsen, Imre Benedek, Clare Orr, Filipa Xavier Valente, Ligita Zvaigzne, Martin Horváth, Antanas Jankauskas, Filip Ađić, Michael Woinke, Niall Mulvihill, Iñigo Lecumberri, Erica Thwaite, Michael Laule, Mariusz Kruk, Milica Stefanovic, Massimo Mancone, Donata Kuśmierz, Gudrun Feuchtner, Mikko Pietilä, Vasco Gama Ribeiro, Tanja Drosch, Christian Delles, Marco Melis, Michael Fisher, Melinda Boussoussou, Charlotte Kragelund, Rosca Aurelian, Stephanie Kelly, Bruno Garcia del Blanco, Ainhoa Rubio, Mihály Károlyi, Jens D. Hove, Ioana Rodean, Susan Regan, Hug Cuéllar Calabria, László Gellér, Linnea Larsen, Roxana Hodas, Adriane E. Napp, Robert Haase, Sarah Feger, Mahmoud Mohamed, Lina M. Serna-Higuita, Konrad Neumann, Henryk Dreger, Matthias Rief, John Danesh, Melanie Estrella, Maria Bosserdt, Peter Martus, Jonathan D. Dodd, Marc Dewey
Computed Tomography Versus Invasive Coronary Angiography in Patients With Diabetes and Suspected Coronary Artery Disease
Diabetes Care 46(11):2015–2023 (Sep 19, 2023)
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Veit Krause, Eric Kunze, Axel Voigt
A surface finite element method for the Navier–Stokes equations on evolving surfaces
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Michael Nestler, Axel Voigt
Stability of rotating equilibrium states of fluid deformable surfaces
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Castillo Bautista, Cristina Marisol, Kristin Eismann, Marc Gentzel, Silvia Pelucchi, Jerome Mertens, Hannah E. Walters, Maximina H. Yun, Jared Sterneckert
Obatoclax Rescues FUS-ALS Phenotypes in iPSC-Derived Neurons by Inducing Autophagy
Cells;12(18):2247 (Sep 11, 2023)
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Ranajay Datta, Fabian Berressem, Friederike Schmid, Arash Nikoubashman, Peter Virnau
Viscosity of Flexible and Semiflexible Ring Melts: Molecular Origins and Flow-Induced Segregation
Macromolecules 56(18):7247–7255 (Sep 7, 2023)
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Xingyu Zhang, Sider Penkov, Teymuras V. Kurzchalia, Vasily Zaburdaev
Periodic ethanol supply as a path toward unlimited lifespan of Caenorhabditis elegans dauer larvae
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Nikolai Klena, Giovanni Maltinti, Umut Batman, Gaia Pigino, Paul Guichard, Virginie Hamel
An In-depth Guide to the Ultrastructural Expansion Microscopy (U-ExM) of Chlamydomonas reinhardtii
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Valentin Ruffine, Andreas Hartmann, Annika Frenzel, Michael Schlierf, Elisabeth Fischer-Friedrich
Twofold Mechanosensitivity Ensures Actin Cortex Reinforcement upon Peaks in Mechanical Tension
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Manish Yadav, Martijn Zuiddam, Helmut Schiessel
The role of transcript regions and amino acid choice in nucleosome positioning
NAR Genomics and Bioinformatics 5(3) (Aug 30, 2023)
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Julius Gonsior, Christian Falkenberg, Silvio Magino, Anja Reusch, Claudio Hartmann, Maik Thiele, Wolfgang Lehner
Comparing and Improving Active Learning Uncertainty Measures for Transformer Models
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Lucas Woltmann, Jerome Thiessat, Claudio Hartmann, Dirk Habich, Wolfgang Lehner
FASTgres: Making Learned Query Optimizer Hinting Effective
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Alexander von der Malsburg, Gracie M. Sapp, Kelly E. Zuccaro, Alexander von Appen, Frank R. Moss, Raghav Kalia, Jeremy A. Bennett, Luciano A. Abriata, Matteo Dal Peraro, Martin van der Laan, Adam Frost, Halil Aydin
Structural mechanism of mitochondrial membrane remodelling by human OPA1
Nature 620(7976):1101–1108 (Aug 23, 2023)
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Adrian Pascal Nievergelt, Dennis Ray Diener, Aliona Bogdanova, Thomas Brown, Gaia Pigino
Efficient precision editing of endogenous Chlamydomonas reinhardtii genes with CRISPR-Cas
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Alexa Sadier, Neal Anthwal, Andrew L. Krause, Renaud Dessalles, Michael Lake, Laurent A. Bentolila, Robert Haase, Natalie A. Nieves, Sharlene E. Santana, Karen E. Sears
Bat teeth illuminate the diversification of mammalian tooth classes
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Wenjie Wang, Katharina Schmidt, Matthias C. Wapler, Ulrike Wallrabe, Jürgen W. Czarske, Nektarios Koukourakis
Fully refractive telecentric f-theta microscope based on adaptive elements for 3D raster scanning of biological tissues
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Georg Börner, Fabio Schittler Neves, Marc Timme
Designing spiking neural networks for robust and reconfigurable computation
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Nils Christian Lehnen, Arndt-Hendrik Schievelkamp, Christian Gronemann, Robert Haase, Inga Krause, Max Gansen, Tobias Fleckenstein, Franziska Dorn, Alexander Radbruch, Daniel Paech
P127/305  Impact of an AI software on the diagnostic performance of radiologists for the detection of cerebral aneurysms on time of flight MR-angiography
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Belin Selcen Beydag-Tasöz, Joyson Verner D’Costa, Lena Hersemann, Byung Ho Lee, Federica Luppino, Yung Hae Kim, Christoph Zechner, Anne Grapin-Botton
Integrating single-cell imaging and RNA sequencing datasets links differentiation and morphogenetic dynamics of human pancreatic endocrine progenitors
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Julian Lich, Tino Wollmann, Robert Kuschmierz, Maik Gude, Jürgen Czarske
Optical sensor for localized damage detection and modal analysis on fast rotating fiber reinforced polymer structures
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Juergen W. Czarske, Nektarios Koukourakis, Jiawei Sun
Multicore fiber endoscopy for 3D rotation of cancer cells
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Mauricio Rocha-Martins, Elisa Nerli, Jenny Kretzschmar, Martin Weigert, Jaroslav Icha, Eugene W. Myers, Caren Norden
Neuronal migration prevents spatial competition in retinal morphogenesis
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Suryanarayana Maddu, Dominik Sturm, Bevan L. Cheeseman, Christian L. Müller, Ivo F. Sbalzarini
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Abhinav Singh, Alejandra Foggia, Pietro Incardona, Ivo F. Sbalzarini
A Meshfree Collocation Scheme for Surface Differential Operators on Point Clouds
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Yu-Hsuan Peng, Syuan-Ku Hsiao, Krishna Gupta, André Ruland, Günter K. Auernhammer, Manfred F. Maitz, Susanne Boye, Johanna Lattner, Claudia Gerri, Alf Honigmann, Carsten Werner, Elisha Krieg
Dynamic matrices with DNA-encoded viscoelasticity for cell and organoid culture
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Felix Schmieder, Lars Büttner, Wouter Derks, Olaf Bergmann, Jürgen W. Czarske
Simultaneous optogenetic stimulation and inhibition using fast ferroelectric spatial light modulators and digital holograms
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Jirina Zackova Suchanova, Gust Bilcke, Beata Romanowska, Ali Fatlawi, Martin Pippel, Alastair Skeffington, Michael Schroeder, Wim Vyverman, Klaas Vandepoele, Nils Kröger, Nicole Poulsen
Diatom adhesive trail proteins acquired by horizontal gene transfer from bacteria serve as primers for marine biofilm formation
New Phytologist 240, 770–783 (Aug 7, 2023)
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Ryota Takaki, Louise Jawerth, Marko Popović, Frank Jülicher
Theory of Rheology and Aging of Protein Condensates
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Anja Reusch, Wolfgang Lehner
Extracting Operator Trees from Model Embeddings
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Johannes Gürtler, Sami Tasmany, Robert Kuschmierz, Jakob Woisetschläger, Jürgen Czarske
Neural network-based tomographic reconstruction of high-speed interferometric and Schlieren image data for density and velocity detection
Multimodal Sensing and Artificial Intelligence: Technologies and Applications III (Aug 3, 2023)
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Sachin Krishnan Thekke Veettil, Gentian Zavalani, Uwe Hernandez Acosta, Ivo F. Sbalzarini, Michael Hecht
Global Polynomial Level Sets for Numerical Differential Geometry of Smooth Closed Surfaces
SIAM J. Sci. Comput. 45(4):A1995–A2018 (Aug 2, 2023)
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Veit Krause, Axel Voigt
A numerical approach for fluid deformable surfaces with conserved enclosed volume
Journal of Computational Physics, 486, 112097, (Aug 1, 2023)
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Nikolaos Perakakis, Hani Harb, Benjamin G Hale, Zsuzsanna Varga, Charlotte Steenblock, Waldemar Kanczkowski, Vasileia Ismini Alexaki, Barbara Ludwig, Peter Mirtschink, Michele Solimena, Nicole Toepfner, Sebastian Zeissig, Manuel Gado, Irene Alma Abela, Felix Beuschlein, Giatgen A Spinas, Claudia Cavelti-Weder, Philipp A Gerber, Michael Huber, Alexandra Trkola, Milo A Puhan, Wendy Wei-Lynn Wong, Andreas Linkermann, Viswanathan Mohan, Hendrik Lehnert, Peter Nawroth, Triantafyllos Chavakis, Geltrude Mingrone, Christian Wolfrum, Annelies S Zinkernagel, Stefan R Bornstein
Mechanisms and clinical relevance of the bidirectional relationship of viral infections with metabolic diseases
The Lancet Diabetes & Endocrinology 11(9):675–693 (Jul 28, 2023)
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Juliane Valtin, Stephan Behrens, André Ruland, Florian Schmieder, Frank Sonntag, Lars D. Renner, Manfred F. Maitz, Carsten Werner
A New In Vitro Blood Flow Model for the Realistic Evaluation of Antimicrobial Surfaces
Adv Healthcare Materials 12(28) (Jul 27, 2023)
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Stefan Rothe, David Krause, Qian Zhang, Dennis Pohle, Nektarios Koukourakis, Jürgen W. Czarske
Learning to control the complex light propagation through few-mode fiber without a reference wave
CLEO 2023 (Jul 27, 2023)
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Anastasia Shatilovich, Vamshidhar R. Gade, Martin Pippel, Tarja T. Hoffmeyer, Alexei V. Tchesunov, Lewis Stevens, Sylke Winkler, Graham M. Hughes, Sofia Traikov, Michael Hiller, Elizaveta Rivkina, Philipp H. Schiffer, Eugene W. Myers, Teymuras V. Kurzchalia
A novel nematode species from the Siberian permafrost shares adaptive mechanisms for cryptobiotic survival with C. elegans dauer larva
PLoS Genet 19(7):e1010798 (Jul 27, 2023)
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Daniel Martin Klotz, Franziska Maria Schwarz, Anna Dubrovska, Kati Schuster, Mirko Theis, Alexander Krüger, Oliver Kutz, Theresa Link, Pauline Wimberger, Stephan Drukewitz, Frank Buchholz, Jürgen Thomale, Jan Dominik Kuhlmann
Establishment and Molecular Characterization of an In Vitro Model for PARPi-Resistant Ovarian Cancer
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Alexandra Parichenko, Wonyeong Choi, Seonghwan Shin, Marlena Schlecht, Rafael Gutierrez, Teuku Fawzul Akbar, Carsten Werner, Jeong‐Soo Lee, Bergoi Ibarlucea, Gianaurelio Cuniberti
Hydrogel‐Gated Silicon Nanotransistors for SARS‐CoV‐2 Antigen Detection in Physiological Ionic Strength
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Georg Börner, Hauke Haehne, Jose Casadiego, Marc Timme
Revealing system dimension from single-variable time series
Chaos: An Interdisciplinary Journal of Nonlinear Science 33(7) (Jul 18, 2023)
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Marcela Uliano-Silva, João Gabriel R. N. Ferreira, Ksenia Krasheninnikova, Mark Blaxter, Nova Mieszkowska, Neil Hall, Peter Holland, Richard Durbin, Thomas Richards, Paul Kersey, Peter Hollingsworth, Willie Wilson, Alex Twyford, Ester Gaya, Mara Lawniczak, Owen Lewis, Gavin Broad, Fergal Martin, Michelle Hart, Ian Barnes, Giulio Formenti, Linelle Abueg, James Torrance, Eugene W. Myers, Richard Durbin, Mark Blaxter, Shane A. McCarthy
MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads
BMC Bioinformatics 24(1), 288 (Jul 18, 2023)
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David T. Gonzales, Surased Suraritdechachai, Christoph Zechner, T.‐Y. Dora Tang
Bidirectional Communication between Droplet Interface Bilayers Driven by Cell‐Free Quorum Sensing Gene Circuits**
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Dirk Habich, Alexander Krause, Johannes Pietrzyk, Christian Faerber, Wolfgang Lehner
Simplicity done right for SIMDified query processing on CPU and FPGA
Proceedings of the 1st Workshop on Simplicity in Management of Data (Jul 17, 2023)
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Claudia Sperling, Manfred F. Maitz, Vincent Körber, Stefanie Hänsel, Carsten Werner
Advanced in vitro hemocompatibility assessment of biomaterials using a new flow incubation system
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Tohid Siddiqui, Mehmet Ilyas Cosacak, Stanislava Popova, Prabesh Bhattarai, Elanur Yilmaz, Annie J. Lee, Yuhao Min, Xue Wang, Mariet Allen, Özkan İş, Zeynep Tansu Atasavum, Natalia Rodriguez-Muela, Badri N. Vardarajan, Delaney Flaherty, Andrew F. Teich, Ismael Santa-Maria, Uwe Freudenberg, Carsten Werner, Giuseppe Tosto, Richard Mayeux, Nilüfer Ertekin-Taner, Caghan Kizil
Nerve growth factor receptor (Ngfr) induces neurogenic plasticity by suppressing reactive astroglial Lcn2/Slc22a17 signaling in Alzheimer’s disease
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Sarah Perez, Suryanarayana Maddu, Ivo F. Sbalzarini, Philippe Poncet
Adaptive weighting of Bayesian physics informed neural networks for multitask and multiscale forward and inverse problems
Journal of Computational Physics 491:112342 (Jul 7, 2023)
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Jorge Lázaro, Maria Costanzo, Marina Sanaki-Matsumiya, Charles Girardot, Masafumi Hayashi, Katsuhiko Hayashi, Sebastian Diecke, Thomas B Hildebrandt, Giovanna Lazzari, Jun Wu, Stoyan Petkov, Rüdiger Behr, Vikas Trivedi*, Mitsuhiro Matsuda*, Miki Ebisuya*
A stem cell zoo uncovers intracellular scaling of developmental tempo across mammals
Cell Stem Cell, 30, 938–949 (Jul 6, 2023)
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Dhawal Choudhary, Laura Mediani, Mario J. Avellaneda, Sveinn Bjarnason, Simon Alberti, Edgar E. Boczek, Pétur O. Heidarsson, Alessandro Mossa, Serena Carra, Sander J. Tans, Ciro Cecconi
Human Small Heat Shock Protein B8 Inhibits Protein Aggregation without Affecting the Native Folding Process
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Wolfgang Lehner
Datenbank-Community vernetzt sich in Dresden
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M. Residori, S. Praetorius, P. de Anna, A. Voigt
Influence of finite-size particles on fluid velocity and transport through porous media
Phys. Rev. Fluids 8(7), 074501 (Jul 5, 2023)
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Qian Zhang, Sujay Charania, Stefan Rothe, Nektarios Koukourakis, Niels Neumann, Dirk Plettemeier, Juergen W. Czarske
Multimode Optical Interconnects on Silicon Interposer Enable Confidential Hardware-to-Hardware Communication
Sensors 23(13):6076 (Jul 3, 2023)
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Felix Meyer, Benjamin Hernandez, Richard Pausch, René Widera, David Groß, Sergei Bastrakov, Axel Huebl, Guido Juckeland, Jeffrey Kelling, Matt Leinhauser, David Rogers, Ulrich Schramm, Klaus Steiniger, Stefan Gumhold, Jeff Young, Michael Bussmann, Sunita Chandrasekaran, Alexander Debus
Hardware-Agnostic Interactive Exascale In Situ Visualization of Particle-In-Cell Simulations
Proceedings of the Platform for Advanced Scientific Computing Conference (Jun 26, 2023)
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Abhinav Singh, Quentin Vagne, Frank Jülicher, Ivo F. Sbalzarini
Spontaneous Flow Instabilities of Active Polar Fluids in Three Dimensions
Phys. Rev. Research, 5, L022061 (Jun 22, 2023)
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Jens Friedrichs, Ralf Helbig, Julia Hilsenbeck, Prithvi Raj Pandey, Jens-Uwe Sommer, Lars David Renner, Tilo Pompe, Carsten Werner
Entropic repulsion of cholesterol-containing layers counteracts bioadhesion
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Kristian Kyle Le Vay, Elia Salibi, Basusree Ghosh, TY Dora Tang, Hannes Mutschler
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Aryaman Gupta, Ulrik Günther, Pietro Incardona, Guido Reina, Steffen Frey, Stefan Gumhold, Ivo F. Sbalzarini
Efficient Raycasting of Volumetric Depth Images for Remote Visualization of Large Volumes at High Frame Rates
2023 IEEE 16th Pacific Visualization Symposium (PacificVis) (Jun 14, 2023)
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Mehdi Moghaddamfar, Christian Färber, Wolfgang Lehner, Akash Kumar
KeRRaS: Sort-Based Database Query Processing on Wide Tables Using FPGAs
Proceedings of the 19th International Workshop on Data Management on New Hardware (Jun 14, 2023)
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Valentina Magno, Carsten Werner
Tissue-Derived Decellularized Materials for Biomedical Applications
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Miguel A. Ruiz-Fresneda, Sebastian Schaefer, René Hübner, Karim Fahmy, Mohamed L. Merroun
Exploring Antibacterial Activity and Bacterial-Mediated Allotropic Transition of Differentially Coated Selenium Nanoparticles
ACS Appl. Mater. Interfaces 15(25):29958–29970 (Jun 9, 2023)
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Anna M. Dowbaj, Timo N. Kohler, Lucía Cordero-Espinoza, Florian Hollfelder, Meritxell Huch
Generation of liver mesenchyme and ductal cell organoid co-culture using cell self-aggregation and droplet microfluidics
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Baldwin Nsonga, Jordi Ventosa-Molina, Denis Koschichow, Jochen Fröhlich, Stefan Gumhold, Gerik Scheuermann
Visual analysis of the impact of periodic wakes on the pressure side of a turbine blade
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Carlotta Hoffmann, Peter E. Schwarz, Christos S. Mantzoros, Andreas L. Birkenfeld, Christian Wolfrum, Michele Solimena, Stefan R. Bornstein, Nikolaos Perakakis
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Jana Oertel, Susanne Sachs, Katrin Flemming, Muhammad Hassan Obeid, Karim Fahmy
Distinct Effects of Chemical Toxicity and Radioactivity on Metabolic Heat of Cultured Cells Revealed by “Isotope-Editing”
Microorganisms 11(3):584 (Feb 27, 2023)
DOI: 10.3390/microorganisms11030584

Jana Sievers, Vaibhav Mahajan, Petra B. Welzel, Carsten Werner, Anna Taubenberger
Precision Hydrogels for the Study of Cancer Cell Mechanobiology
Adv Healthcare Materials 12(14) (Feb 24, 2023)
DOI: 10.1002/adhm.202202514

Deolinda Silva, Lucas Schirmer, Tiffany S. Pinho, Passant Atallah, Jorge R. Cibrão, Rui Lima, João Afonso, Sandra B‐Antunes, Cláudia R. Marques, João Dourado, Uwe Freudenberg, Rui A. Sousa, Carsten Werner, António J. Salgado
Sustained Release of Human Adipose Tissue Stem Cell Secretome from Star‐Shaped Poly(ethylene glycol) Glycosaminoglycan Hydrogels Promotes Motor Improvements after Complete Transection in Spinal Cord Injury Rat Model
Adv Healthcare Materials 12(17) (Feb 24, 2023)
DOI: 10.1002/adhm.202202803

Robert Haase, Thomas Pinetz, Erich Kobler, Daniel Paech, Alexander Effland, Alexander Radbruch, Katerina Deike-Hofmann
Artificial Contrast
Invest Radiol 58(8):539–547 (Feb 24, 2023)
DOI: 10.1097/rli.0000000000000963

Jing Wang, Marcus Michel, Lisa Bialas, Giulia Pierini, Christian Dahmann
Preferential recruitment and stabilization of Myosin II at compartment boundaries in Drosophila
J Cell Sci 136 (5): jcs260447. (Feb 24, 2023)
DOI: 10.1242/jcs.260447

Kosti Tapio, Charlotte Kielar, Johannes M. Parikka, Adrian Keller, Heini Järvinen, Karim Fahmy, J. Jussi Toppari
Large-Scale Formation of DNA Origami Lattices on Silicon
Chem. Mater. 35(5):1961–1971 (Feb 23, 2023)
DOI: 10.1021/acs.chemmater.2c03190

Pascal Y. Schönberg, Li Ding, Frank Buchholz
Genom-Editierung ohne die DNA-Sequenz zu verändern — geht das?
Biospektrum 29(1):46–48 (Feb 21, 2023)
DOI: 10.1007/s12268-023-1882-2

Lucas Daniel Wittwer, Felix Reichel, Paul Müller, Jochen Guck, Sebastian Aland
A new hyperelastic lookup table for RT-DC
Soft Matter 19(11):2064–2073 (Feb 20, 2023)
DOI: 10.1039/d2sm01418a

Lucas Kuhrts, Lukas Helmbrecht, Willem L. Noorduin, Darius Pohl, Xiaoxiao Sun, Alexander Palatnik, Cornelia Wetzker, Anne Jantschke, Michael Schlierf, Igor Zlotnikov
Recruiting Unicellular Algae for the Mass Production of Nanostructured Perovskites
Adv. Sci.2023, 2300355 (Feb 12, 2023)
DOI: 10.1002/advs.202300355

Mehdi Moghaddamfar, Norman May, Christian Färber, Wolfgang Lehner, Akash Kumar
A Study of Early Aggregation in Database Query Processing on FPGAs
Proceedings of the 2023 ACM/SIGDA International Symposium on Field Programmable Gate Arrays (Feb 10, 2023)
DOI: 10.1145/3543622.3573194

Blair P. Bentley, Tomás Carrasco-Valenzuela, Elisa K. S. Ramos, Harvinder Pawar, Larissa Souza Arantes, Alana Alexander, Shreya M. Banerjee, Patrick Masterson, Martin Kuhlwilm, Martin Pippel, Jacquelyn Mountcastle, Bettina Haase, Marcela Uliano-Silva, Giulio Formenti, Kerstin Howe, William Chow, Alan Tracey, Ying Sims, Sarah Pelan, Jonathan Wood, Kelsey Yetsko, Justin R. Perrault, Kelly Stewart, Scott R. Benson, Yaniv Levy, Erica V. Todd, H. Bradley Shaffer, Peter Scott, Brian T. Henen, Robert W. Murphy, David W. Mohr, Alan F. Scott, David J. Duffy, Neil J. Gemmell, Alexander Suh, Sylke Winkler, Françoise Thibaud-Nissen, Mariana F. Nery, Tomas Marques-Bonet, Agostinho Antunes, Yaron Tikochinski, Peter H. Dutton, Olivier Fedrigo, Eugene W. Myers, Erich D. Jarvis, Camila J. Mazzoni, Lisa M. Komoroske
Divergent sensory and immune gene evolution in sea turtles with contrasting demographic and life histories
Proc. Natl. Acad. Sci. U.S.A. 120(7) (Feb 7, 2023)
DOI: 10.1073/pnas.2201076120

Georg Krainer, Kadi L. Saar, William E. Arter, Timothy J. Welsh, Magdalena A. Czekalska, Raphaël P. B. Jacquat, Quentin Peter, Walther C. Traberg, Arvind Pujari, Akhila K. Jayaram, Pavankumar Challa, Christopher G. Taylor, Lize-Mari van der Linden, Titus Franzmann, Roisin M. Owens, Simon Alberti, David Klenerman, Tuomas P. J. Knowles
Direct digital sensing of protein biomarkers in solution
Nat Commun 14(1), 653 (Feb 6, 2023)
DOI: 10.1038/s41467-023-35792-x

Alicia Daeden, Alexander Mietke, Emmanuel Derivery, Carole Seum, Frank Jülicher, Marcos Gonzalez-Gaitan
Polarized branched Actin modulates cortical mechanics to produce unequal-size daughters during asymmetric division
Nat Cell Biol 25(2):235–245 (Feb 6, 2023)
DOI: 10.1038/s41556-022-01058-9

Qian Wu, Euclides Sacomboio, Lara Valente de Souza, Rui Martins, Jamil Kitoko, Sílvia Cardoso, Temitope W. Ademolue, Tiago Paixão, Jaakko Lehtimäki, Ana Figueiredo, Caren Norden, Pierre-Louis Tharaux, Guenter Weiss, Fudi Wang, Susana Ramos, Miguel P. Soares
Renal control of life-threatening malarial anemia
Cell Reports 42(2):112057 (Feb 2, 2023)
DOI: 10.1016/j.celrep.2023.112057

Christa Ringers, Stephan Bialonski, Mert Ege, Anton Solovev, Jan Niklas Hansen, Inyoung Jeong, Benjamin M Friedrich, Nathalie Jurisch-Yaksi
Novel analytical tools reveal that local synchronization of cilia coincides with tissue-scale metachronal waves in zebrafish multiciliated epithelia
eLife 12:e77701 (Jan 26, 2023)
DOI: 10.7554/eLife.77701

Christoph R. Meinecke, Georg Heldt, Thomas Blaudeck, Frida W. Lindberg, Falco C. M. J. M. van Delft, Mohammad Ashikur Rahman, Aseem Salhotra, Alf Månsson, Heiner Linke, Till Korten, Stefan Diez, Danny Reuter, Stefan E. Schulz
Nanolithographic fabrication technologies for network-based biocomputation devices
Materials 16 (3) 1046 (Jan 24, 2023)
DOI: 10.3390/ma16031046

Ankush Checkervarty, Jens-Uwe Sommer, Marco Werner
Machine learning of an implicit solvent for dynamic Monte Carlo simulations
The Journal of Chemical Physics 158(12) (Jan 24, 2023)
DOI: 10.1063/5.0116618

Anne-Lena Moor, Christoph Zechner
Dynamic information transfer in stochastic biochemical networks
Physical Review Research 5(1):013032 (Jan 23, 2023)
DOI: 10.1103/PhysRevResearch.5.013032

Ali Al-Fatlawi, Michael Schroeder, A. Francis Stewart
The Rad52 SSAP superfamily and new insight into homologous recombination
Commun Biol 6(1), 87 (Jan 23, 2023)
DOI: 10.1038/s42003-023-04476-z

D. GroB, M. Klauck, T. P. Gros, M. Steinmetz, J. Hoffmann, S. Gumhold
Glyph-Based Visual Analysis of Q-Leaning Based Action Policy Ensembles on Racetrack
2022 26th International Conference Information Visualisation (IV) (Jan 23, 2023)
DOI: 10.1109/iv56949.2022.00011

Elias Scharf, Robert Kuschmierz, Ronja Stephan, Michael Steinke, Jürgen W. Czarske
Needle-size fibre endoscope with 3D printed DOEs for minimally invasive procedures in biomedicine
Biomedical Spectroscopy, Microscopy, and Imaging II (Jan 23, 2023)
DOI: 10.1117/12.2620319

Jürgen W. Czarske, Nektarios Koukourakis, Stefan Rothe, Felix Wagner, Mike O. Karl
Understanding neurodegeneration in human organoid retina with optical microscopy
Biomedical Spectroscopy, Microscopy, and Imaging II (Jan 23, 2023)
DOI: 10.1117/12.2622155

Belin Selcen Beydag-Tasöz, Siham Yennek, Anne Grapin-Botton
Towards a better understanding of diabetes mellitus using organoid models
Nat Rev Endocrinol (Jan 20, 2023)
DOI: 10.1038/s41574-022-00797-x

Joël Mabillard, Christoph A. Weber, Frank Jülicher
Heat Fluctuations in Chemically Active Systems
Phys. Rev. E 107, 014118 (Jan 13, 2023)
DOI: 10.1103/PhysRevE.107.014118

Hongxia Hao, Ellen M. Adams, Sarah Funke, Gerhard Schwaab, Martina Havenith, Teresa Head-Gordon
Highly Altered State of Proton Transport in Acid Pools in Charged Reverse Micelles
J. Am. Chem. Soc. 145, 3, 1826–1834 (Jan 12, 2023)
DOI: 10.1021/jacs.2c11331

Samuel E. Lacey, Helen E. Foster, Gaia Pigino
The molecular structure of IFT-A and IFT-B in anterograde intraflagellar transport trains
Nat Struct Mol Biol 30(5):584–593 (Jan 2, 2023)
DOI: 10.1038/s41594-022-00905-5

Alessandro Mongera, Marie Pochitaloff, Hannah J. Gustafson, Georgina A. Stooke-Vaughan, Payam Rowghanian, Sangwoo Kim, Otger Campàs*
Mechanics of the cellular microenvironment as probed by cells in vivo during zebrafish presomitic mesoderm differentiation
Nat. Mater. 22, 135–143 (Jan 2023)
* corresponding author
DOI: 10.1038/s41563-022-01433-9

Mathias Schenkel, Dorna Ravamehr-Lake, Tomasz Czerniak, James P.Saenz, Georg Krainer, Michael Schlierf, Charles M. Deber
Impact of cholesterol and Lumacaftor on the folding of CFTR helical hairpins
Biochim Biophys Acta Biomembr 184078 (Jan 1, 2023)
DOI: 10.1016/j.bbamem.2022.184078

2022

253 publication(s) listed

Tina Helmecke, Dominik Hahn, Nadine Matzke, Lisa Ferdinand, Lars Franke, Sebastian Kühn, Gunter Fischer, Carsten Werner, Manfred F. Maitz
Inflammation‐Controlled Anti‐Inflammatory Hydrogels
Advanced Science 10(7) (Dec 30, 2022)
DOI: 10.1002/advs.202206412

Lukas Theo Schmitt, Maciej Paszkowski-Rogacz, Florian Jug, Frank Buchholz
Prediction of designer-recombinases for DNA editing with generative deep learning
Nat Commun 13(1), 7966 (Dec 27, 2022)
DOI: 10.1038/s41467-022-35614-6

Shanshan Xu, Maria E Gierisch, Anna Katharina Schellhaus, Ina Poser, Simon Alberti, Florian A Salomons, Nico P Dantuma
Cytosolic stress granules relieve the ubiquitin‐proteasome system in the nuclear compartment
The EMBO Journal 42(3) (Dec 27, 2022)
DOI: 10.15252/embj.2022111802

Katja Krug, Wolfgang Büschel, Konstantin Klamka, Raimund Dachselt
CleAR Sight: Exploring the Potential of Interacting with Transparent Tablets in Augmented Reality
2022 IEEE International Symposium on Mixed and Augmented Reality (ISMAR) (Dec 27, 2022)
DOI: 10.1109/ISMAR55827.2022.00034

Hannes Emmerich, Leon Knupfer, Sascha Heitkam, Eric Starke, Pavel Trtik, Ludwig Schaller, David Weik, Jurgen Czarske
Ultrasound imaging of liquid fraction in foam
IEEE Trans. Instrum. Meas. 1–1 (Dec 21, 2022)
DOI: 10.1109/tim.2022.3228582

Jiawei Sun, Nektarios Koukourakis, Jürgen W. Czarske
Real-time quantitative phase imaging through a multicore fiber using deep learning
Holography, Diffractive Optics, and Applications XII (Dec 20, 2022)
DOI: 10.1117/12.2642514

Maria K. Koch, Akhilandeshwari Ravichandran, Berline Murekatete, Julien Clegg, Mary Teresa Joseph, Madison Hampson, Mitchell Jenkinson, Hannah S. Bauer, Cameron Snell, Cheng Liu, Madeline Gough, Erik W. Thompson, Carsten Werner, Dietmar W. Hutmacher, Larisa M. Haupt, Laura J. Bray
Exploring the Potential of PEG‐Heparin Hydrogels to Support Long‐Term Ex Vivo Culture of Patient‐Derived Breast Explant Tissues
Adv Healthcare Materials 12(14) (Dec 17, 2022)
DOI: 10.1002/adhm.202202202

Lucas Woltmann, Claudio Hartmann, Wolfgang Lehner, Paul Rausch, Katja Ferger
Sensor-based jump detection and classification with machine learning in trampoline gymnastics
Ger J Exerc Sport Res 53(2):187–195 (Dec 8, 2022)
DOI: 10.1007/s12662-022-00866-3

Juliana Hildebrandt, Johannes Pietrzyk, Alexander Krause, Dirk Habich, Wolfgang Lehner
Partition-based SIMD Processing and its Application to Columnar Database Systems
Datenbank Spektrum 23(1):53–63 (Dec 7, 2022)
DOI: 10.1007/s13222-022-00431-0

Christoph Heintze, Iaroslav Babenko, Jirina Zackova Suchanova, Alastair Skeffington, Benjamin M. Friedrich, Nils Kröger
The molecular basis for pore pattern morphogenesis in diatom silica
Proc Natl Acad Sci U S A 119(49):e2211549119 (Dec 2, 2022)
DOI: 10.1073/pnas.2211549119

Elisa Donato, Nadia Correia, Carolin Andresen, Darja Karpova, Roberto Würth, Corinna Klein, Markus Sohn, Adriana Przybylla, Petra Zeisberger, Kathrin Rothfelder, Helmut Salih, Halvard Bonig, Sebastian Stasik, Christoph Röllig, Anna Dolnik, Lars Bullinger, Frank Buchholz, Christian Thiede, Daniel Hübschmann, Andreas Trumpp
Retained functional normal and preleukemic HSCs at diagnosis are associated with good prognosis in DNMT3AmutNPM1mut AMLs
Blood Advances 7(6):1011–1018 (Dec 1, 2022)
DOI: 10.1182/bloodadvances.2022008497

F. Schmieder, R. Habibey, V. Busskamp, J.W. Czarske, L. Büttner
Adaptive Holographic Optogenetic Illumination for Human Neural Network Analysis
Digital Holography and 3-D Imaging 2022 (Dec 1, 2022)
DOI: 10.1364/dh.2022.w4a.7

Alexis J. Haas, Ceniz Zihni, Susanne M. Krug, Riccardo Maraspini, Tetsuhisa Otani, Mikio Furuse, Alf Honigmann, Maria S. Balda, Karl Matter
ZO-1 Guides Tight Junction Assembly and Epithelial Morphogenesis via Cytoskeletal Tension-Dependent and -Independent Functions
Cells 11(23):3775 (Nov 28, 2022)
DOI: 10.3390/cells11233775

Thomas Bach, Artur Andrzejak, Changyun Seo, Christian Bierstedt, Christian Lemke, Daniel Ritter, Dong Won Hwang, Erda Sheshi, Felix Schabernack, Frank Renkes, Gordon Gaumnitz, Jakob Martens, Lars Hoemke, Michael Felderer, Michael Rudolf, Neetha Jambigi, Norman May, Robin Joy, Ruben Scheja, Sascha Schwedes, Sebastian Seibel, Sebastian Seifert, Stefan Haas, Stephan Kraft, Thomas Kroll, Tobias Scheuer, Wolfgang Lehner
Testing Very Large Database Management Systems: The Case of SAP HANA
Datenbank Spektrum 22(3):195–215 (Nov 25, 2022)
DOI: 10.1007/s13222-022-00426-x

Verena Kast, Ali Nadernezhad, Dagmar Pette, Anastasiia Gabrielyan, Maximilian Fusenig, Kim C. Honselmann, Daniel E. Stange, Carsten Werner, Daniela Loessner
A Tumor Microenvironment Model of Pancreatic Cancer to Elucidate Responses toward Immunotherapy
Adv Healthcare Materials 12(14) (Nov 24, 2022)
DOI: 10.1002/adhm.202201907

Laura Martínez‐Vidal, Valentina Magno, Petra B. Welzel, Jens Friedrichs, Martin Bornhäuser, Carsten Werner
Combining Cryogel Architecture and Macromolecular Crowding‐Enhanced Extracellular Matrix Cues to Mimic the Bone Marrow Niche
Macro Chemistry & Physics 224(1) (Nov 24, 2022)
DOI: 10.1002/macp.202200348

Moritz Thümler, Malte Schröder, Marc Timme
Nonlinear and divergent responses of fluctuation-driven systems
IFAC-PapersOnLine 55(30):254–259 (Nov 23, 2022)
DOI: 10.1016/j.ifacol.2022.11.061

Keisuke Ishihara, Arghyadip Mukherjee, Elena Gromberg, Jan Brugués, Elly M. Tanaka, Frank Jülicher
Topological Morphogenesis of Neuroepithelial Organoids
Nature Physics, 19, 177–183 (online: Nov 21, 2022)
DOI: 10.1038/s41567-022-01822-6

Zhi-Feng Huang, Hartmut Löwen, Axel Voigt
Defect dynamics in active smectics induced by confining geometry and topology
Commun Phys 5(1), 294 (Nov 19, 2022)
DOI: 10.1038/s42005-022-01064-1

Willi G. Mantei, Benedikt Stender, Jonas Wiedenmann, Elias Scharf, Robert Kuschmierz, Jürgen W. Czarske
Needle-shaped lensless holographic endoscopes realized with TPP
Optical Fibers and Sensors for Medical Diagnostics, Treatment and Environmental Applications XXII (Nov 18, 2022)
DOI: 10.1117/12.2608705

Rahul O. Ramakrishnan, Andrea Auconi and Benjamin M. Friedrich
Learning stochastic filtering
EPL 140 31002 (Nov 17, 2022)
DOI: 10.1209/0295-5075/ac9d01

Frank Jülicher, Jacques Prost, John Toner
Broken Living Layers: Dislocations in Active Smectic Liquid Crystals
Phys. Rev. E 106, 054607 (Nov 15, 2022)
DOI: 10.1103/PhysRevE.106.054607

Stefan Rothe, Qian Zhang, Dennis Pohle, Nektarios Koukourakis, Juergen W. Czarske
Smart transmission matrix measurement of multimode fibers using digital holography and deep learning for confidential data transmission
Digital Holography and 3-D Imaging 2022 (Nov 10, 2022)
DOI: 10.1364/dh.2022.m2a.5

Caitlyn L McCafferty, Ophelia Papoulas, Mareike A Jordan, Gabriel Hoogerbrugge, Candice Nichols, Gaia Pigino, David W Taylor, John B Wallingford, Edward M Marcotte
Integrative modeling reveals the molecular architecture of the intraflagellar transport A (IFT-A) complex
eLife 11 (Nov 8, 2022)
DOI: 10.7554/elife.81977

Jiachen Wu, Tijue Wang, Ortrud Uckermann, Roberta Galli, Gabriele Schackert, Liangcai Cao, Juergen Czarske, Robert Kuschmierz
Learned end-to-end high-resolution lensless fiber imaging towards real-time cancer diagnosis
Sci Rep 12(1), 18846 (Nov 7, 2022)
DOI: 10.1038/s41598-022-23490-5

Julius Gonsior, Maik Thiele, Wolfgang Lehner
ImitAL: Learned Active Learning Strategy on Synthetic Data
Lecture Notes in Computer Science 47–56 (Nov 5, 2022)
DOI: 10.1007/978-3-031-18840-4_4

Takashi Nishio, Tomoya Masaoka, Yuko Yoshikawa, Koichiro Sadakane, Takahiro Kenmotsu, Helmut Schiessel, Kenichi Yoshikawa
Markedly Different Effects of Monovalent Cations on the Efficiency of Gene Expression
Advanced Biology 7(3) (Nov 4, 2022)
DOI: 10.1002/adbi.202200164

Anne Grapin-Botton, Yung Hae Kim
Pancreas organoid models of development and regeneration
Development 149(20) (Oct 31, 2022)
DOI: 10.1242/dev.201004

Xuejing Wang, Shuqi Wu, T.-Y. Dora Tang, Liangfei Tian
Engineering strategies for sustainable synthetic cells
Trends in Chemistry 4(12):1106–1120 (Oct 27, 2022)
DOI: 10.1016/j.trechm.2022.09.011

Jingyuan Zhu, Aseem Salhotra, Christoph Robert Meinecke, Pradheebha Surendiran, Roman Lyttleton, Danny Reuter, Hillel Kugler, Stefan Diez, Alf Månsson, Heiner Linke, Till Korten
Solving the 3-SAT problem using network-based biocomputation
Adv. Intell. Syst. 2200202 (Oct 26, 2022)
DOI: 10.1002/aisy.202200202

Anna Svirina, Neharika Chamachi, Michael Schlierf
Single-molecule approaches reveal outer membrane protein biogenesis dynamics
BioEssays, 00, e2200149 (Oct 25, 2022)
DOI: 10.1002/bies.202200149

Georg Börner, Malte Schröder, Davide Scarselli, Nazmi Burak Budanur, Björn Hof, Marc Timme
Explosive transitions in epidemic dynamics
J. Phys. Complex. 3(4):04LT02 (Oct 25, 2022)
DOI: 10.1088/2632-072x/ac99cd

Qinghao Yu, Hannah E. Walters, Maximina H. Yun
Induction and Characterization of Cellular Senescence in Salamanders
Methods Mol Biol: 2562:135-154 (online: Oct 23, 2022)
DOI: 10.1007/978-1-0716-2659-7_8

Florian Bürkle, Maik Förste, Kaspars Dadzis, Iason Tsiapkinis, Olf Pätzold, Alexandros Charitos, Michael Dues, Jürgen Czarske, Lars Büttner
Application of optical velocity measurements including a novel calibration technique for micron-resolution to investigate the gas flow in a model experiment for crystal growth
Flow Measurement and Instrumentation 88:102258 (Oct 21, 2022)
DOI: 10.1016/j.flowmeasinst.2022.102258

Keiichi Katsumoto, Siham Yennek, Chunguang Chen, Luis Fernando Delgadillo Silva, Sofia Traikov, Dror Sever, Ajuna Azad, Jingdong Shan, Seppo Vainio, Nikolay Ninov, Stephan Speier, Anne Grapin-Botton
Wnt4 is heterogeneously activated in maturing β-cells to control calcium signaling, metabolism and function
Nat Commun 13(1), 6255 (Oct 21, 2022)
DOI: 10.1038/s41467-022-33841-5

Helmut Schiessel
Computer simulations of chromatin phase separation
Biophysical Journal 121(22):4244–4246 (Oct 19, 2022)
DOI: 10.1016/j.bpj.2022.10.007

Camilo Riquelme-Guzmán, Stephanie L Tsai, Karen Carreon Paz, Congtin Nguyen, David Oriola, Maritta Schuez, Jan Brugués, Joshua D Currie, Tatiana Sandoval-Guzmán
Osteoclast-mediated resorption primes the skeleton for successful integration during axolotl limb regeneration
eLife 11:e79966. (Oct 19, 2022)
DOI: 10.7554/eLife.79966

Ronja Stephan, Elias Scharf, Kinga Zolnacz, Katharina Hausmann, Matthias Ließmann, Lea Kötters, Jürgen Czarske, Detlev Ristau, Robert Kuschmierz, Michael Steinke
Scalable fabrication of twisted aperiodic multicore fibers for next-generation lens-less endoscopy
EPJ Web Conf. 267:02027 (Oct 18, 2022)
DOI: 10.1051/epjconf/202226702027

Eliane P. van Dam, Benedikt König, Sashary Ramos, Ellen M. Adams, Gerhard Schwaab, Martina Havenith
Observation of dissipating solvated protons upon hydrogel formation
Phys. Chem. Chem. Phys., 24, 27893-27899 (Oct 17, 2022)
DOI: 10.1039/D2CP01949C

Jan Geisler, Victoria Tianjing Yan, Stephan Grill, Arjun Narayanan
Mass Balance Imaging: A Phase Portrait Analysis for Characterizing Growth Kinetics of Biomolecular Condensates
Methods in Molecular Biology (2023) 413–424, vol 2563 (online: Oct 14, 2022)
DOI: 10.1007/978-1-0716-2663-4_21

Jonathan Bauermann, Sudarshana Laha, Patrick M. McCall, Frank Jülicher, Christoph A. Weber
Chemical Kinetics and Mass Action in Coexisting Phases
J. Am. Chem. Soc. 144(42):19294–19304 (Oct 14, 2022)
DOI: 10.1021/jacs.2c06265

Martijn Zuiddam, Bahareh Shakiba, Helmut Schiessel
Multiplexing mechanical and translational cues on genes
Biophysical Journal 121(22):4311–4324 (Oct 13, 2022)
DOI: 10.1016/j.bpj.2022.10.011

Zahra Mohammadyarloo, Jens-Uwe Sommer
Co-nonsolvency Transition in Polymer Solutions: A Simulation Study
Macromolecules 55(20):8975–8986 (Oct 13, 2022)
DOI: 10.1021/acs.macromol.2c01280

Martin Z. Bazant, Carsten Werner
Editorial overview: Electrokinetics 2022
Current Opinion in Colloid & Interface Science 63:101643 (Oct 11, 2022)
DOI: 10.1016/j.cocis.2022.101643

Jürgen W. Czarske, Lars Buettner, Clemens Bilsing
Dynamic aberration correction using a deformable mirror and double-helix point spread function for flow metrology (Conference Presentation)
Unconventional Imaging and Adaptive Optics 2022 (Oct 11, 2022)
DOI: 10.1117/12.2633992

Karen G. Soans, Ana Patricia Ramos, Jaydeep Sidhaye, Abhijeet Krishna, Anastasia Solomatina, Karl B. Hoffmann, Raimund Schlüßler, Jochen Guck, Ivo F. Sbalzarini, Carl D. Modes, Caren Norden
Collective cell migration during optic cup formation features changing cell-matrix interactions linked to matrix topology
Current Biology 32(22):4817–4831.e9 (Oct 7, 2022)
DOI: 10.1016/j.cub.2022.09.034

Nicole Poulsen, Helene Hennig, Veikko F Geyer, Stefan Diez, Richard Wetherbee, Sorel Fitz-Gibbon, Matteo Pellegrini, Nils Kröger
On the role of cell surface associated, mucin-like glycoproteins in the pennate diatom Craspedostauros Australis (Bacillariophyceae)
J. Phycol. 59, 54–69 (2023) (Oct 5, 2022)
DOI: 10.1111/jpy.13287

Juergen W. Czarske, Jiachen Wu, Tijue Wang, Tom Glosemeyer, Julian Andreas Lich, Robert Kuschmierz
Learning-based high-resolution lensless fiber microendoscopy (Conference Presentation)
Emerging Topics in Artificial Intelligence (ETAI) 2022 (Oct 4, 2022)
DOI: 10.1117/12.2633990

Swayamshree Patra, Debashish Chowdhury, Frank Jülicher
Length control of long cell protrusions: Rulers, timers and transport
Physics Reports 987:1–51 (Sep 29, 2022)
DOI: 10.1016/j.physrep.2022.08.002

Axel Hertzschuch, Claudio Hartmann, Dirk Habich, Wolfgang Lehner
Turbo-charging SPJ query plans with learned physical join operator selections
Proc. VLDB Endow. 15(11):2706–2718 (Sep 29, 2022)
DOI: 10.14778/3551793.3551825

Benjamin Russig, David Groß, Raimund Dachselt, Stefan Gumhold
On-Tube Attribute Visualization for Multivariate Trajectory Data
IEEE Transactions on Visualization and Computer Graphics, 29, 1288-1298 (online: Sep 28, 2022)
DOI: 10.1109/TVCG.2022.3209400

Adrian Pascal Nievergelt, Ilia Zykov, Dennis Diener, Aditya Chhatre, Tim-Oliver Buchholz, Markus Delling, Stefan Diez, Florian Jug, Luděk Štěpánek, Gaia Pigino
Conversion of anterograde into retrograde trains is an intrinsic property of intraflagellar transport
Current Biology 32(18), R967–R969 (Sep 26, 2022)
DOI: 10.1016/j.cub.2022.07.033

Ruosong Wang, Lucas Schirmer, Torsten Wieduwilt, Ronny Förster, Markus A. Schmidt, Uwe Freudenberg, Carsten Werner, Andreas Fery, Christian Rossner
Colorimetric Biosensors Based on Polymer/Gold Hybrid Nanoparticles: Topological Effects of the Polymer Coating
Langmuir 38(40):12325–12332 (Sep 26, 2022)
DOI: 10.1021/acs.langmuir.2c02013

Tingying He, Petra Isenberg, Raimund Dachselt, Tobias Isenberg
BeauVis: A Validated Scale for Measuring the Aesthetic Pleasure of Visual Representations
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Inverse Dirichlet weighting enables reliable training of physics informed neural networks
Machine Learning: Science and Technology, Volume 3, Number 1 (Feb 15, 2022)
DOI: 10.1088/2632-2153/ac3712

Louise Fritsche, Julia Hummel, Robert Wagner, Dorina Löffler, Julia Hartkopf, Jürgen Machann, Johannes Hilberath, Konstantinos Kantartzis, Peter Jakubowski, Jan Pauluschke-Fröhlich, Sara Brucker, Sebastian Hörber, Hans-Ulrich Häring, Michael Roden, Annette Schürmann, Michele Solimena, Martin Hrabe de Angelis, Andreas Peter, Andreas L Birkenfeld, Hubert Preissl, Andreas Fritsche, Martin Heni
The German Gestational Diabetes Study (PREG), a prospective multicentre cohort study: rationale, methodology and design
BMJ Open 12(2):e058268 (Feb 15, 2022)
DOI: 10.1136/bmjopen-2021-058268

Juan M Iglesias-Artola, Björn Drobot, Mrityunjoy Kar, Anatol Fritsch, Hannes Mutschler, T-Y Dora Tang, Moritz Kreysing
Charge-density reduction promotes ribozyme activity in RNA-peptide coacervates via RNA fluidization and magnesium partitioning
Nature Chemistry 2022 (Feb 14, 2022)
DOI: 10.1038/s41557-022-00890-8

P. S. Burada, R. Maity, F. Jülicher
Hydrodynamics of chiral squirmers
Phys. Rev. E 105(2), 024603 (Feb 14, 2022)
DOI: 10.1103/physreve.105.024603

Gert Rapp, Constantin van Ingen, Elena Erben, Nicola Maghelli, Moritz Kreysing, Florian Huhn
Focused light induced cytoplasmatic streaming (FLUCS): non-invasive microscopic flow fields and their applications
Biophysical Journal 121(3):426a (Feb 11, 2022)
DOI: 10.1016/j.bpj.2021.11.645

Maria Romanova-Michaelides, Zena Hadjivasiliou, Daniel Aguilar-Hidalgo, Dimitris Basagiannis, Carole Seum, Marine Dubois, Frank Jülicher, Marcos Gonzalez-Gaitan
Morphogen gradient scaling by recycling of intracellular Dpp
Nature 602, 287–293 (Feb 10, 2022)
DOI: 10.1038/s41586-021-04346-w

Benjamin A. Dalton, David Oriola, Franziska Decker, Frank Jülicher, Jan Brugués
A Gelation Transition Enables the Self-organization of Bipolar Metaphase Spindles
Nature Physics 18, 323–331 (Feb 10, 2022)
DOI: 10.1038/s41567-021-01467-x

David Rettke, Christian Danneberg, Talika Alina Neuendorf, Sebastian Kühn, Jens Friedrichs, Nicolas Hauck, Carsten Werner, Julian Thiele, Tilo Pompe
Microfluidics-assisted synthesis and functionalization of monodisperse colloidal hydrogel particles for optomechanical biosensors
J. Mater. Chem. B 10(10):1663–1674 (Feb 10, 2022)
DOI: 10.1039/d1tb02798k

Johannes Mey, Sebastian Ebert, Tianfang Lin, Giang T. Nguyen, Stefan Gumhold, Uwe Asmann
Teaching Distributed and Heterogeneous Robotic Cells
2022 IEEE 19th Annual Consumer Communications & Networking Conference (CCNC) (Feb 10, 2022)
DOI: 10.1109/ccnc49033.2022.9700686

Matthias Arzt, Joran Deschamps, Christopher Schmied, Tobias Pietzsch, Deborah Schmidt, Pavel Tomancak, Robert Haase, Florian Jug
LABKIT: Labeling and Segmentation Toolkit for Big Image Data
Front. Comput. Sci. 4 (Feb 10, 2022)
DOI: 10.3389/fcomp.2022.777728

Barbara Scalvini, Helmut Schiessel, Anatoly Golovnev, Alireza Mashaghi
Circuit topology analysis of cellular genome reveals signature motifs, conformational heterogeneity, and scaling
iScience 25(3):103866 (Feb 5, 2022)
DOI: 10.1016/j.isci.2022.103866

Jose A. Morin, Sina Wittmann, Sandeep Choubey, Adam Klosin, Stefan Golfier, Anthony A. Hyman, Frank Jülicher, Stephan W. Grill
Sequence-dependent Surface Condensation of a Pioneer Transcription Factor on DNA
Nat. Phys. (Feb 3, 2022)
DOI: 10.1038/s41567-021-01462-2

M. K. L. N. Sikosana, A. Ruland, C. Werner, L. D. Renner
Combining Microscopy Assays of Bacteria-Surface Interactions To Better Evaluate Antimicrobial Polymer Coatings
Appl Environ Microbiol 88(6) (Feb 2, 2022)
DOI: 10.1128/aem.02241-21

Juliane Hammer, Paul Röppenack, Sarah Yousuf, Christian Schnabel, Anke Weber, Daniela Zöller, Edmund Koch, Stefan Hans, Michael Brand
Visual Function is Gradually Restored During Retina Regeneration in Adult Zebrafish
Front. Cell Dev. Biol. 9 (Feb 1, 2022)
DOI: 10.3389/fcell.2021.831322

Benedikt Krug, Nektarios Koukourakis, Jochen Guck, Jürgen Czarske
Nonlinear microscopy using impulsive stimulated Brillouin scattering for high-speed elastography
Opt. Express 30(4):4748 (Jan 31, 2022)
DOI: 10.1364/oe.449980

Colin Jackson, Agnes Toth-Petroczy, Rachel Kolodny, Florian Hollfelder, Monika Fuxreiter, Shina Caroline Lynn Kamerlin, Nobuhiko Tokuriki
Adventures on the Routes of Protein Evolution—In Memoriam Dan Salah Tawfik (1955–2021)
Journal of Molecular Biology 434(7):167462 (Jan 29, 2022)
DOI: 10.1016/j.jmb.2022.167462

Sebastian Burgmann, Veronika Krämer, Michael Dues, Jonas Steinbock, Lars Büttner, Juergen Czarske, Uwe Janoske
Flow-measurements in the wake of an oscillating sessile droplet using laser-Doppler velocity profile sensor
tm - Technisches Messen 89(3):178–188 (Jan 28, 2022)
DOI: 10.1515/teme-2021-0119

Sebastian Hempel, Florian Oehme, Florian Ehehalt, Michele Solimena, Fiona Kolbinger, Andreas Bogner, Thilo Welsch, Jürgen Weitz, Marius Distler
The Impact of Pancreatic Head Resection on Blood Glucose Homeostasis in Patients with Chronic Pancreatitis
JCM 11(3):663 (Jan 28, 2022)
DOI: 10.3390/jcm11030663

Kang Du, Martin Pippel, Susanne Kneitz, Romain Feron, Irene da Cruz, Sylke Winkler, Brigitta Wilde, Edgar G. Avila Luna, Gene Myers, Yann Guiguen, Constantino Macias Garcia, Manfred Schartl
Genome biology of the darkedged splitfin, Girardinichthys multiradiatus, and the evolution of sex chromosomes and placentation
Genome Res. 32(3):583–594 (Jan 26, 2022)
DOI: 10.1101/gr.275826.121

Courtney W Hanna, Jiahao Huang, Christian Belton, Susanne Reinhardt, Andreas Dahl, Simon Andrews, A Francis Stewart, Andrea Kranz, Gavin Kelsey
Loss of histone methyltransferase SETD1B in oogenesis results in the redistribution of genomic histone 3 lysine 4 trimethylation
Nucleic Acids Research 50(4):1993–2004 (Jan 25, 2022)
DOI: 10.1093/nar/gkac051

Carla Guillén-Pingarrón, Pedro M. Guillem-Gloria, Anjali Soni, Gloria Ruiz-Gómez, Martina Augsburg, Frank Buchholz, Massimiliano Anselmi, M. Teresa Pisabarro
Conformational dynamics promotes disordered regions from function-dispensable to essential in evolved site-specific DNA recombinases
Computational and Structural Biotechnology Journal 20:989–1001 (Jan 22, 2022)
DOI: 10.1016/j.csbj.2022.01.010

Kyoohyun Kim, Abin Biswas, Omar Muñoz Cárdenas, Simone Reber, Vasily Zaburdaev, Jochen Guck
Optical diffraction tomography for studying the mass density difference between nucleus and cytoplasm
Quantitative Phase Imaging VIII (Jan 21, 2022)
DOI: 10.1117/12.2608692

Johanna Grinat, Frauke Kosel, Neha Goveas, Andrea Kranz, Dimitra Alexopoulou, Klaus Rajewsky, Michael Sigal, A Francis Stewart, Julian Heuberger
Epigenetic modifier balances Mapk and Wnt signalling in differentiation of goblet and Paneth cells
Life Sci. Alliance 5(4):e202101187 (Jan 21, 2022)
DOI: 10.26508/lsa.202101187

Cordula Reuther, Paula Santos-Otte, Rahul Grover, Georg Heldt, Günther Woehlke, Stefan Diez
Multiplication of Motor-driven Microtubules for Nanotechnological Applications
Nano Lett. 22(3) 926–934 (Jan 20, 2022)
DOI: 10.1021/acs.nanolett.1c03619

Felix Lansing, Liliya Mukhametzyanova, Teresa Rojo-Romanos, Kentaro Iwasawa, Masaki Kimura, Maciej Paszkowski-Rogacz, Janet Karpinski, Tobias Grass, Jan Sonntag, Paul Martin Schneider, Ceren Günes, Jenna Hoersten, Lukas Theo Schmitt, Natalia Rodriguez-Muela, Ralf Knöfler, Takanori Takebe, Frank Buchholz
Correction of a Factor VIII genomic inversion with designer-recombinases
Nat Commun 13(1), 422 (Jan 20, 2022)
DOI: 10.1038/s41467-022-28080-7

Lars Gruter, Richard Nauber, Jurgen W. Czarske
Ultrasonic Bubble Imaging in Molten Salt Using a Multi-Mode Waveguide and Time Reversal
IEEE Trans. Instrum. Meas. 71:1–10 (Jan 20, 2022)
DOI: 10.1109/tim.2022.3144739

Maik Herbig, Karen Tessmer, Martin Nötzel, Ahsan Ahmad Nawaz, Tiago Santos-Ferreira, Oliver Borsch, Sylvia J. Gasparini, Jochen Guck, Marius Ader
Label-free imaging flow cytometry for analysis and sorting of enzymatically dissociated tissues
Sci Rep 12(1), 963 (Jan 19, 2022)
DOI: 10.1038/s41598-022-05007-2

Maik Herbig, Angela Jacobi, Manja Wobus, Heike Weidner, Anna Mies, Martin Kräter, Oliver Otto, Christian Thiede, Marie‑Theresa Weickert, Katharina S. Götze, Martina Rauner, Lorenz C. Hofbauer, Martin Bornhäuser, Jochen Guck, Marius Ader, Uwe Platzbecker, Ekaterina Balaian
Machine learning assisted real-time deformability cytometry of CD34+ cells allows to identify patients with myelodysplastic syndromes
Sci Rep 12(1), 870 (Jan 18, 2022)
DOI: 10.1038/s41598-022-04939-z

Harris A. Lewin, Stephen Richards, Erez Lieberman Aiden, Miguel L. Allende, John M. Archibald, Miklós Bálint, Katharine B. Barker, Bridget Baumgartner, Katherine Belov, Giorgio Bertorelle, Mark L. Blaxter, Jing Cai, Nicolette D. Caperello, Keith Carlson, Juan Carlos Castilla-Rubio, Shu-Miaw Chaw, Lei Chen, Anna K. Childers, Jonathan A. Coddington, Dalia A. Conde, Montserrat Corominas, Keith A. Crandall, Andrew J. Crawford, Federica DiPalma, Richard Durbin, ThankGod E. Ebenezer, Scott V. Edwards, Olivier Fedrigo, Paul Flicek, Giulio Formenti, Richard A. Gibbs, M. Thomas P. Gilbert, Melissa M. Goldstein, Jennifer Marshall Graves, Henry T. Greely, Igor V. Grigoriev, Kevin J. Hackett, Neil Hall, David Haussler, Kristofer M. Helgen, Carolyn J. Hogg, Sachiko Isobe, Kjetill Sigurd Jakobsen, Axel Janke, Erich D. Jarvis, Warren E. Johnson, Steven J. M. Jones, Elinor K. Karlsson, Paul J. Kersey, Jin-Hyoung Kim, W. John Kress, Shigehiro Kuraku, Mara K. N. Lawniczak, James H. Leebens-Mack, Xueyan Li, Kerstin Lindblad-Toh, Xin Liu, Jose V. Lopez, Tomas Marques-Bonet, Sophie Mazard, Jonna A. K. Mazet, Camila J. Mazzoni, Eugene W. Myers, Rachel J. O’Neill, Sadye Paez, Hyun Park, Gene E. Robinson, Cristina Roquet, Oliver A. Ryder, Jamal S. M. Sabir, H. Bradley Shaffer, Timothy M. Shank, Jacob S. Sherkow, Pamela S. Soltis, Boping Tang, Leho Tedersoo, Marcela Uliano-Silva, Kun Wang, Xiaofeng Wei, Regina Wetzer, Julia L. Wilson, Xun Xu, Huanming Yang, Anne D. Yoder, Guojie Zhang
The Earth BioGenome Project 2020: Starting the clock
Proc. Natl. Acad. Sci. U.S.A. 119(4) (Jan 18, 2022)
DOI: 10.1073/pnas.2115635118

Mara K. N. Lawniczak, Richard Durbin, Paul Flicek, Kerstin Lindblad-Toh, Xiaofeng Wei, John M. Archibald, William J. Baker, Katherine Belov, Mark L. Blaxter, Tomas Marques Bonet, Anna K. Childers, Jonathan A. Coddington, Keith A. Crandall, Andrew J. Crawford, Robert P. Davey, Federica Di Palma, Qi Fang, Wilfried Haerty, Neil Hall, Katharina J. Hoff, Kerstin Howe, Erich D. Jarvis, Warren E. Johnson, Rebecca N. Johnson, Paul J. Kersey, Xin Liu, Jose Victor Lopez, Eugene W. Myers, Olga Vinnere Pettersson, Adam M. Phillippy, Monica F. Poelchau, Kim D. Pruitt, Arang Rhie, Juan Carlos Castilla-Rubio, Sunil Kumar Sahu, Nicholas A. Salmon, Pamela S. Soltis, David Swarbreck, Françoise Thibaud-Nissen, Sibo Wang, Jill L. Wegrzyn, Guojie Zhang, He Zhang, Harris A. Lewin, Stephen Richards
Standards recommendations for the Earth BioGenome Project
Proc. Natl. Acad. Sci. U.S.A. 119(4) (Jan 18, 2022)
DOI: 10.1073/pnas.2115639118

Dennis Pohle, Stefan Rothe, Nektarios Koukourakis, Jürgen Czarske
Surveillance of few-mode fiber-communication channels with a single hidden layer neural network
Opt. Lett. 47(5):1275 (Jan 14, 2022)
DOI: 10.1364/ol.445885

Juliana Hildebrandt, Andre Berthold, Dirk Habich, Wolfgang Lehner
LCTL: Lightweight Compression Template Library
2021 IEEE International Conference on Big Data (Big Data) (Jan 13, 2022)
DOI: 10.1109/bigdata52589.2021.9671706

Timothy J. Welsh, Georg Krainer, Jorge R. Espinosa, Jerelle A. Joseph, Akshay Sridhar, Marcus Jahnel, William E. Arter, Kadi L. Saar, Simon Alberti, Rosana Collepardo-Guevara, Tuomas P. J. Knowles
Surface Electrostatics Govern the Emulsion Stability of Biomolecular Condensates
Nano Lett. 22(2):612–621 (Jan 10, 2022)
DOI: 10.1021/acs.nanolett.1c03138

Raimund Schlüßler, Kyoohyun Kim, Martin Nötzel, Anna Taubenberger, Shada Abuhattum, Timon Beck, Paul Müller, Shovamaye Maharana, Gheorghe Cojoc, Salvatore Girardo, Andreas Hermann, Simon Alberti, Jochen Guck
Correlative all-optical quantification of mass density and mechanics of subcellular compartments with fluorescence specificity
eLife 11 (Jan 10, 2022)
DOI: 10.7554/elife.68490

David T. Gonzales, Naresh Yandrapalli, Tom Robinson, Christoph Zechner, T-Y. Dora Tang
Cell-Free Gene Expression Dynamics in Synthetic Cell Populations
ACS Synth Biol 11(1):205–215 (Jan 4, 2022)
DOI: 10.1021/acssynbio.1c00376

Florian Bürkle, Jürgen Czarske, Lars Büttner
Simultaneous velocity profile and temperature profile measurements in microfluidics
Flow Measurement and Instrumentation 83:102106 (Jan 1, 2022)
DOI: 10.1016/j.flowmeasinst.2021.102106

2021

234 publication(s) listed

Frederic Carsten Schmeel, Asadeh Lakghomi, Nils Christian Lehnen, Robert Haase, Mohammed Banat, Johannes Wach, Nikolaus Handke, Hartmut Vatter, Alexander Radbruch, Ulrike Attenberger, Julian Alexander Luetkens
Proton Density Fat Fraction Spine MRI for Differentiation of Erosive Vertebral Endplate Degeneration and Infectious Spondylitis
Diagnostics 12(1):78 (Dec 31, 2021)
DOI: 10.3390/diagnostics12010078

Sara Vanessa Bernhard, Katarzyna Seget-Trzensiok, Christian Kuffer, Dragomir B. Krastev, Lisa-Marie Stautmeister, Mirko Theis, Kristina Keuper, Jan-Eric Boekenkamp, Maik Kschischo, Frank Buchholz, Zuzana Storchova
Loss of USP28 and SPINT2 expression promotes cancer cell survival after whole genome doubling
Cell Oncol. 45(1):103–119 (Dec 28, 2021)
DOI: 10.1007/s13402-021-00654-5

Sadra Bakhshandeh, Carsten Werner, Peter Fratzl, Amaia Cipitria
Microenvironment-mediated cancer dormancy: Insights from metastability theory
Proc. Natl. Acad. Sci. U.S.A. 119(1) (Dec 23, 2021)
DOI: 10.1073/pnas.2111046118

Lucas Woltmann, Peter Volk, Michael Dinzinger, Lukas Gräf, Sebastian Strasser, Johannes Schildgen, Claudio Hartmann, Wolfgang Lehner
Data Science Meets High-Tech Manufacturing – The BTW 2021 Data Science Challenge
Datenbank Spektrum 22(1):5–10 (Dec 21, 2021)
DOI: 10.1007/s13222-021-00398-4

Jesse V. Veenvliet, Pierre-François Lenne, David A. Turner, Iftach Nachman, Vikas Trivedi
Sculpting with stem cells: how models of embryo development take shape
Development 148 (24): dev192914 (Dec 15, 2021)
DOI: 10.1242/dev.192914

Juliane Valtin, Stephan Behrens, Manfred F. Maitz, Florian Schmieder, Frank Sonntag, Carsten Werner
A modular in vitro flow model to analyse blood-surface interactions under physiological conditions
Current Directions in Biomedical Engineering 7(2):171–174 (Dec 10, 2021)
DOI: 10.1515/cdbme-2021-2044

Robert Kuschmierz, Elias Scharf, David F. Ortegón-González, Tom Glosemeyer, Jürgen W. Czarske
Ultra-thin 3D lensless fiber endoscopy using diffractive optical elements and deep neural networks
Light: Advanced Manufacturing 2, Article number: 30 (Dec 6, 2021)
DOI: 10.37188/lam.2021.030

Yuhan Wang, Mark Eddison, Greg Fleishman, Martin Weigert, Shengjin Xu, Tim Wang, Konrad Rokicki, Cristian Goina, Fredrick E. Henry, Andrew L. Lemire, Uwe Schmidt, Hui Yang, Karel Svoboda, Eugene W. Myers, Stephan Saalfeld, Wyatt Korff, Scott M. Sternson, Paul W. Tillberg
EASI-FISH for thick tissue defines lateral hypothalamus spatio-molecular organization
Cell 184(26):6361–6377.e24 (Dec 6, 2021)
DOI: 10.1016/j.cell.2021.11.024

Alan Ianeselli, Damla Tetiker, Julian Stein, Alexandra Kühnlein, Christof B. Mast, Dieter Braun, T.-Y. Dora Tang
Non-equilibrium conditions inside rock pores drive fission, maintenance and selection of coacervate protocells
Nat. Chem. 14(1):32–39 (Dec 6, 2021)
DOI: 10.1038/s41557-021-00830-y

Fabio Schittler Neves, Marc Timme
Decoding complex state space trajectories for neural computing
Chaos: An Interdisciplinary Journal of Nonlinear Science 31(12) (Dec 6, 2021)
DOI: 10.1063/5.0053429

Jenna Hoersten, Gloria Ruiz-Gómez, Felix Lansing, Teresa Rojo-Romanos, Lukas Theo Schmitt, Jan Sonntag, M Teresa Pisabarro, Frank Buchholz
Pairing of single mutations yields obligate Cre-type site-specific recombinases
Nucleic Acids Research 50(2):1174–1186 (Dec 6, 2021)
DOI: 10.1093/nar/gkab1240

Ingo Nitschke, Axel Voigt
Observer-invariant time derivatives on moving surfaces
Journal of Geometry and Physics 173:104428 (Dec 3, 2021)
DOI: 10.1016/j.geomphys.2021.104428

Neha Goveas, Claudia Waskow, Kathrin Arndt, Julian Heuberger, Qinyu Zhang, Dimitra Alexopoulou, Andreas Dahl, Walter Birchmeier, Konstantinos Anastassiadis, A. Francis Stewart, Andrea Kranz
MLL1 is required for maintenance of intestinal stem cells
PLoS Genet 17(12):e1009250 (Dec 3, 2021)
DOI: 10.1371/journal.pgen.1009250

Cordula Reuther, Sönke Steenhusen, Christoph Robert Meinecke, Pradheebha Surendiran, Aseem Salhotra, Frida W Lindberg, Alf Månsson, Heiner Linke, Stefan Diez
Molecular motor-driven filament transport across three-dimensional, polymeric micro-junctions
New J. Phys. 23, 125002 (Dec 2, 2021)
DOI: 10.1088/1367-2630/ac39b4

Stefano Bo, Lars Hubatsch, Jonathan Bauermann, Christoph A. Weber, Frank Jülicher
Stochastic dynamics of single molecules across phase boundaries
Phys. Rev. Research 3, 043150, (Dec 2, 2021)
DOI: 10.1103/PhysRevResearch.3.043150

Xueping Zhao, Giacomo Bartolucci, Alf Honigmann, Frank Jülicher, Christoph A Weber
Thermodynamics of Wetting, Prewetting and Surface Phase Transitions with Surface Binding
New J. Phys. 23, 123003, (Dec 1, 2021)
DOI: 10.1088/1367-2630/ac320b

Dennis Schifferl, Manuela Scholze-Wittler, Lars Wittler, Jesse V. Veenvliet, Frederic Koch, Bernhard G. Herrmann
A 37 kb region upstream of brachyury comprising a notochord enhancer is essential for notochord and tail development
Development 148(23) (Nov 25, 2021)
DOI: 10.1242/dev.200059

D. Wenzel and A. Voigt
Multiphase field models for collective cell migration
Phys. Rev. E 104, 054410 (Nov 24, 2021)
DOI: 10.1103/PhysRevE.104.054410

Alexandra Michurina, M Sadman Sakib, Cemil Kerimoglu, Dennis Manfred Krüger, Lalit Kaurani, Md Rezaul Islam, Parth Devesh Joshi, Sophie Schröder, Tonatiuh Pena Centeno, Jiayin Zhou, Ranjit Pradhan, Julia Cha, Xingbo Xu, Gregor Eichele, Elisabeth M Zeisberg, Andrea Kranz, A Francis Stewart, André Fischer
Postnatal expression of the lysine methyltransferase SETD1B is essential for learning and the regulation of neuron‐enriched genes
The EMBO Journal 41(1) (Nov 22, 2021)
DOI: 10.15252/embj.2020106459

Nesrine Khouzami, Friedrich Michel, Pietro Incardona, Jeronimo Castrillon, Ivo F. Sbalzarini
Model-based autotuning of discretization methods in numerical simulations of partial differential equations
Journal of Computational Science 57:101489 (Nov 20, 2021)
DOI: 10.1016/j.jocs.2021.101489

Yukako Oda, Chisato Takahashi, Shota Harada, Shun Nakamura, Daxiao Sun, Kazumi Kiso, Yuko Urata, Hitoshi Miyachi, Yoshinori Fujiyoshi, Alf Honigmann, Seiichi Uchida, Yasushi Ishihama, Fumiko Toyoshima
Discovery of anti-inflammatory physiological peptides that promote tissue repair by reinforcing epithelial barrier formation
Sci. Adv. 7(47) (Nov 17, 2021)
DOI: 10.1126/sciadv.abj6895

Chloé Roffay, Guillaume Molinard, Kyoohyun Kim, Marta Urbanska, Virginia Andrade, Victoria Barbarasa, Paulina Nowak, Vincent Mercier, José García-Calvo, Stefan Matile, Robbie Loewith, Arnaud Echard, Jochen Guck, Martin Lenz, Aurélien Roux
Passive coupling of membrane tension and cell volume during active response of cells to osmosis
Proc. Natl. Acad. Sci. U.S.A. 118(47) (Nov 16, 2021)
DOI: 10.1073/pnas.2103228118

Byung Ho Lee, Irene Seijo-Barandiaran, Anne Grapin-Botton
Epithelial morphogenesis in organoids
Current Opinion in Genetics & Development 72:30–37 (Nov 15, 2021)
DOI: 10.1016/j.gde.2021.10.001

David Weik, Richard Nauber, Lars Buttner, Jurgen Czarske, Dirk Rabiger, Sanjay Singh, Tobias Vogt, Sven Eckert
Ultrasound Image Velocimetry with Adaptive Beamforming for Modal Measurements in Liquid Metal Convection
2021 IEEE International Ultrasonics Symposium (IUS) (Nov 13, 2021)
DOI: 10.1109/ius52206.2021.9593429

Dalileh Nabi, Hauke Drechsler, Johannes Pschirer, Franz Korn, Nadine Schuler, Stefan Diez, Rolf Jessberger, Mariola Chacón
CENP-V is required for proper chromosome segregation through interaction with spindle microtubules in mouse oocytes
Nat Commun 12, 6547 (Nov 11, 2021)
DOI: 10.1038/s41467-021-26826-3

Johannes Girstmair, HongKee Moon, Charlène Brillard, Robert Haase, Pavel Tomancak
Time to Upgrade: A New OpenSPIM Guide to Build and Operate Advanced OpenSPIM Configurations
Advanced Biology 6(4) (Nov 11, 2021)
DOI: 10.1002/adbi.202101182

Judit Clopés, Jaeoh Shin, Marcus Jahnel, Stephan W. Grill, Vasily Zaburdaev
Thermal fluctuations assist mechanical signal propagation in coiled-coil proteins
Phys. Rev. E 104(5), 054403 (Nov 11, 2021)
DOI: 10.1103/physreve.104.054403

Safak Chasan, Eliane Hesse, Passant Atallah, Matthias Gerstner, Solvig Diederichs, Astrid Schenker, Kay Grobe, Carsten Werner, Wiltrud Richter
Sulfation of Glycosaminoglycan Hydrogels Instructs Cell Fate and Chondral versus Endochondral Lineage Decision of Skeletal Stem Cells In Vivo
Adv Funct Materials 32(7) (Nov 6, 2021)
DOI: 10.1002/adfm.202109176

Vaibhav Mahajan, Timon Beck, Paulina Gregorczyk, André Ruland, Simon Alberti, Jochen Guck, Carsten Werner, Raimund Schlüßler, Anna Verena Taubenberger
Mapping Tumor Spheroid Mechanics in Dependence of 3D Microenvironment Stiffness and Degradability by Brillouin Microscopy
Cancers 13(21):5549 (Nov 5, 2021)
DOI: 10.3390/cancers13215549

Tooba Quidwai, Jiaolong Wang, Emma A Hall, Narcis A Petriman, Weihua Leng, Petra Kiesel, Jonathan N Wells, Laura C Murphy, Margaret A Keighren, Joseph A Marsh, Esben Lorentzen, Gaia Pigino, Pleasantine Mill
A WDR35-dependent coat protein complex transports ciliary membrane cargo vesicles to cilia
eLife 10 (Nov 4, 2021)
DOI: 10.7554/elife.69786

Weizhou Luo, Eva Goebel, Patrick Reipschläger, Mats Ole Ellenberg, Raimund Dachselt
Exploring and Slicing Volumetric Medical Data in Augmented Reality Using a Spatially-Aware Mobile Device
IEEE International Symposium on Mixed and Augmented Reality Adjunct (ISMAR-Adjunct) (Nov 3, 2021)
DOI: 10.1109/ISMAR-Adjunct54149.2021.00076

Lucas Woltmann, Dominik Olwig, Claudio Hartmann, Dirk Habich, Wolfgang Lehner
PostCENN
Proc. VLDB Endow. 14(12):2715–2718 (Oct 28, 2021)
DOI: 10.14778/3476311.3476327

Iliya D. Stoev, Benjamin Seelbinder, Elena Erben, Nicola Maghelli, Moritz Kreysing
Highly sensitive force measurements in an optically generated, harmonic hydrodynamic trap
eLight, 1, 7 (Oct 23, 2021)
DOI: 10.1186/s43593-021-00007-7

Xue Wang, Wentao Zheng, Haibo Zhou, Qiang Tu, Ya-Jie Tang, A Francis Stewart, Youming Zhang, Xiaoying Bian
Improved dsDNA recombineering enables versatile multiplex genome engineering of kilobase-scale sequences in diverse bacteria
Nucleic Acids Research 50(3):e15–e15 (Oct 22, 2021)
DOI: 10.1093/nar/gkab1076

Cindy D. Beyer, Sugina Thavalingam, Tatiana Guseva, Lisa Schardt, Ralf Zimmermann, Carsten Werner, Pascal Dietze, Julia Elisabeth Bandow, Nils Metzler-Nolte, Axel Rosenhahn
Zwitterionic Peptides Reduce Accumulation of Marine and Freshwater Biofilm Formers
ACS Appl. Mater. Interfaces 13(42):49682–49691 (Oct 20, 2021)
DOI: 10.1021/acsami.1c13459

Robert Wagner, Sabine S. Eckstein, Hajime Yamazaki, Felicia Gerst, Jürgen Machann, Benjamin Assad Jaghutriz, Annette Schürmann, Michele Solimena, Stephan Singer, Alfred Königsrainer, Andreas L. Birkenfeld, Hans-Ulrich Häring, Andreas Fritsche, Susanne Ullrich, Martin Heni
Metabolic implications of pancreatic fat accumulation
Nat Rev Endocrinol 18(1):43–54 (Oct 20, 2021)
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Alena Uvizl, Ruchi Goswami, Shanil Durgeshkumar Gandhi, Martina Augsburg, Frank Buchholz, Jochen Guck, Jörg Mansfeld, Salvatore Girardo
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Günter Schabert, Robert Haase, Jaclyn Parris, Laura Pala, Adrian Hery-Barranco, Bernhard Spingler, Urs Spitz
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Jörg Pawelke, Michael Brand, Stefan Hans, Katalin Hideghéty, Leonhard Karsch, Elisabeth Lessmann, Steffen Löck, Michael Schürer, Emília Rita Szabó, Elke Beyreuther
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Maximina H Yun, Toshinori Hayashi, Andras Simon
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Jiawei Sun, Nektarios Koukourakis, and Jürgen W. Czarske
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C. Hoyer, D. Prousalis, L. Wetzel, R. Riaz, Jens Wagner, F. Julicher, F. Ellinger
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Sarah Alaghbari, Annett Mitschick, Gregor Blichmann, Martin Voigt, Raimund Dachselt
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Kelvin C.M. Lee, Jochen Guck, Keisuke Goda, Kevin K. Tsia
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Tom M. J. Evers, Liam J. Holt, Simon Alberti, Alireza Mashaghi
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Florian Levet, Anne E. Carpenter, Kevin W. Eliceiri, Anna Kreshuk, Peter Bankhead, Robert Haase
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Lucas von Chamier, Romain F. Laine, Johanna Jukkala, Christoph Spahn, Daniel Krentzel, Elias Nehme, Martina Lerche, Sara Hernández-Pérez, Pieta K. Mattila, Eleni Karinou, Séamus Holden, Ahmet Can Solak, Alexander Krull, Tim-Oliver Buchholz, Martin L. Jones, Loïc A. Royer, Christophe Leterrier, Yoav Shechtman, Florian Jug, Mike Heilemann, Guillaume Jacquemet, Ricardo Henriques
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Suryanarayana Maddu, Bevan L. Cheeseman, Christian L. Müller, Ivo F. Sbalzarini
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Christel Baier, Maria Christakis, Timo P. Gros, David Groß, Stefan Gumhold, Holger Hermanns, Jörg Hoffmann, Michaela Klauck
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Abin Biswas, Kyoohyun Kim, Gheorghe Cojoc, Jochen Guck, Simone Reber
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Debarghya Banerjee, Vincenzo Vitelli, Frank Jülicher, Piotr Surówka
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Joan-Carles Escolano, Anna V. Taubenberger, Shada Abuhattum, Christine Schweitzer, Aleeza Farrukh, Aránzazu del Campo, Clare E. Bryant, Jochen Guck
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Claudio Durán, Sara Ciucci, Alessandra Palladini, Umer Z. Ijaz, Antonio G. Zippo, Francesco Paroni Sterbini, Luca Masucci, Giovanni Cammarota, Gianluca Ianiro, Pirjo Spuul, Michael Schroeder, Stephan W. Grill, Bryony N. Parsons, D. Mark Pritchard, Brunella Posteraro, Maurizio Sanguinetti, Giovanni Gasbarrini, Antonio Gasbarrini, Carlo Vittorio Cannistraci
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K. Venkatesan Iyer, Anna Taubenberger, Salma Ahmed Zeidan, Natalie A. Dye, Suzanne Eaton, Frank Jülicher
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Bast, Alakananda Basu, Henri Batoko, Isabella Batten, Etienne E. Baulieu, Bradley L. Baumgarner, Jagadeesh Bayry, Rupert Beale, Isabelle Beau, Florian Beaumatin, Luiz R.G. Bechara, George R. Beck, Michael F. Beers, Jakob Begun, Christian Behrends, Georg M.N. Behrens, Roberto Bei, Eloy Bejarano, Shai Bel, Christian Behl, Amine Belaid, Naïma Belgareh-Touzé, Cristina Bellarosa, Francesca Belleudi, Melissa Belló Pérez, Raquel Bello-Morales, Jackeline Soares de Oliveira Beltran, Sebastián Beltran, Doris Mangiaracina Benbrook, Mykolas Bendorius, Bruno A. Benitez, Irene Benito-Cuesta, Julien Bensalem, Martin W. Berchtold, Sabina Berezowska, Daniele Bergamaschi, Matteo Bergami, Andreas Bergmann, Laura Berliocchi, Clarisse Berlioz-Torrent, Amélie Bernard, Lionel Berthoux, Cagri G. Besirli, Sebastien Besteiro, Virginie M. Betin, Rudi Beyaert, Jelena S. Bezbradica, Kiran Bhaskar, Ingrid Bhatia-Kissova, Resham Bhattacharya, Sujoy Bhattacharya, Shalmoli Bhattacharyya, Md. Shenuarin Bhuiyan, Sujit Kumar Bhutia, Lanrong Bi, Xiaolin Bi, Trevor J. Biden, Krikor Bijian, Viktor A. Billes, Nadine Binart, Claudia Bincoletto, Asa B. Birgisdottir, Geir Bjorkoy, Gonzalo Blanco, Ana Blas-Garcia, Janusz Blasiak, Robert Blomgran, Klas Blomgren, Janice S. Blum, Emilio Boada-Romero, Mirta Boban, Kathleen Boesze-Battaglia, Philippe Boeuf, Barry Boland, Pascale Bomont, Paolo Bonaldo, Srinivasa Reddy Bonam, Laura Bonfili, Juan S. Bonifacino, Brian A. Boone, Martin D. Bootman, Matteo Bordi, Christoph Borner, Beat C. Bornhauser, Gautam Borthakur, Jürgen Bosch, Santanu Bose, Luis M. Botana, Juan Botas, Chantal M. Boulanger, Michael E. Boulton, Mathieu Bourdenx, Benjamin Bourgeois, Nollaig M. Bourke, Guilhem Bousquet, Patricia Boya, Peter V. Bozhkov, Luiz H. M. Bozi, Tolga O. Bozkurt, Doug E. Brackney, Christian H. Brandts, Ralf J. Braun, Gerhard H. Braus, Roberto Bravo-Sagua, José M. Bravo-San Pedro, Patrick Brest, Marie-Agnès Bringer, Alfredo Briones-Herrera, V. Courtney Broaddus, Peter Brodersen, Jeffrey L. Brodsky, Steven L. Brody, Paola G. Bronson, Jeff M. Bronstein, Carolyn N. Brown, Rhoderick E. Brown, Patricia C. Brum, John H. Brumell, Nicola Brunetti-Pierri, Daniele Bruno, Robert J. Bryson-Richardson, Cecilia Bucci, Carmen Buchrieser, Marta Bueno, Laura Elisa Buitrago-Molina, Simone Buraschi, Shilpa Buch, J. Ross Buchan, Erin M. Buckingham, Hikmet Budak, Mauricio Budini, Geert Bultynck, Florin Burada, Joseph R. Burgoyne, M. Isabel Burón, Victor Bustos, Sabrina Büttner, Elena Butturini, Aaron Byrd, Isabel Cabas, Sandra Cabrera-Benitez, Ken Cadwell, Jingjing Cai, Lu Cai, Qian Cai, Montserrat Cairó, Jose A. Calbet, Guy A. Caldwell, Kim A. Caldwell, Jarrod A. Call, Riccardo Calvani, Ana C. Calvo, Miguel Calvo-Rubio Barrera, Niels OS Camara, Jacques H. Camonis, Nadine Camougrand, Michelangelo Campanella, Edward M. Campbell, François-Xavier Campbell-Valois, Silvia Campello, Ilaria Campesi, Juliane C. Campos, Olivier Camuzard, Jorge Cancino, Danilo Candido de Almeida, Laura Canesi, Isabella Caniggia, Barbara Canonico, Carles Cantí, Bin Cao, Michele Caraglia, Beatriz Caramés, Evie H. Carchman, Elena Cardenal-Muñoz, Cesar Cardenas, Luis Cardenas, Sandra M. Cardoso, Jennifer S. Carew, Georges F. Carle, Gillian Carleton, Silvia Carloni, Didac Carmona-Gutierrez, Leticia A. Carneiro, Oliana Carnevali, Julian M. Carosi, Serena Carra, Alice Carrier, Lucie Carrier, Bernadette Carroll, A. Brent Carter, Andreia Neves Carvalho, Magali Casanova, Caty Casas, Josefina Casas, Chiara Cassioli, Eliseo F. Castillo, Karen Castillo, Sonia Castillo-Lluva, Francesca Castoldi, Marco Castori, Ariel F. Castro, Margarida Castro-Caldas, Javier Castro-Hernandez, Susana Castro-Obregon, Sergio D. Catz, Claudia Cavadas, Federica Cavaliere, Gabriella Cavallini, Maria Cavinato, Maria L. Cayuela, Paula Cebollada Rica, Valentina Cecarini, Francesco Cecconi, Marzanna Cechowska-Pasko, Simone Cenci, Victòria Ceperuelo-Mallafré, João J. Cerqueira, Janete M. Cerutti, Davide Cervia, Vildan Bozok Cetintas, Silvia Cetrullo, Han-Jung Chae, Andrei S. Chagin, Chee-Yin Chai, Gopal Chakrabarti, Oishee Chakrabarti, Tapas Chakraborty, Trinad Chakraborty, Mounia Chami, Georgios Chamilos, David W. Chan, Edmond Y. W. Chan, Edward D. Chan, H.Y. Edwin Chan, Helen H. Chan, Hung Chan, Matthew T.V. Chan, Yau Sang Chan, Partha K. Chandra, Chih-Peng Chang, Chunmei Chang, Hao-Chun Chang, Kai Chang, Jie Chao, Tracey Chapman, Nicolas Charlet-Berguerand, Samrat Chatterjee, Shail K. Chaube, Anu Chaudhary, Santosh Chauhan, Edward Chaum, Frédéric Checler, Michael E. Cheetham, Chang-Shi Chen, Guang-Chao Chen, Jian-Fu Chen, Liam L. Chen, Leilei Chen, Lin Chen, Mingliang Chen, Mu-Kuan Chen, Ning Chen, Quan Chen, Ruey-Hwa Chen, Shi Chen, Wei Chen, Weiqiang Chen, Xin-Ming Chen, Xiong-Wen Chen, Xu Chen, Yan Chen, Ye-Guang Chen, Yingyu Chen, Yongqiang Chen, Yu-Jen Chen, Yue-Qin Chen, Zhefan Stephen Chen, Zhi Chen, Zhi-Hua Chen, Zhijian J. Chen, Zhixiang Chen, Hanhua Cheng, Jun Cheng, Shi-Yuan Cheng, Wei Cheng, Xiaodong Cheng, Xiu-Tang Cheng, Yiyun Cheng, Zhiyong Cheng, Zhong Chen, Heesun Cheong, Jit Kong Cheong, Boris V. Chernyak, Sara Cherry, Chi Fai Randy Cheung, Chun Hei Antonio Cheung, King-Ho Cheung, Eric Chevet, Richard J. Chi, Alan Kwok Shing Chiang, Ferdinando Chiaradonna, Roberto Chiarelli, Mario Chiariello, Nathalia Chica, Susanna Chiocca, Mario Chiong, Shih-Hwa Chiou, Abhilash I. Chiramel, Valerio Chiurchiù, Dong-Hyung Cho, Seong-Kyu Choe, Augustine M.K. Choi, Mary E. Choi, Kamalika Roy Choudhury, Norman S. Chow, Charleen T. Chu, Jason P. Chua, John Jia En Chua, Hyewon Chung, Kin Pan Chung, Seockhoon Chung, So-Hyang Chung, Yuen-Li Chung, Valentina Cianfanelli, Iwona A. Ciechomska, Mariana Cifuentes, Laura Cinque, Sebahattin Cirak, Mara Cirone, Michael J. Clague, Robert Clarke, Emilio Clementi, Eliana M. Coccia, Patrice Codogno, Ehud Cohen, Mickael M. Cohen, Tania Colasanti, Fiorella Colasuonno, Robert A. Colbert, Anna Colell, Miodrag Čolić, Nuria S. Coll, Mark O. Collins, María I. Colombo, Daniel A. Colón-Ramos, Lydie Combaret, Sergio Comincini, Márcia R. Cominetti, Antonella Consiglio, Andrea Conte, Fabrizio Conti, Viorica Raluca Contu, Mark R. Cookson, Kevin M. Coombs, Isabelle Coppens, Maria Tiziana Corasaniti, Dale P. Corkery, Nils Cordes, Katia Cortese, Maria do Carmo Costa, Sarah Costantino, Paola Costelli, Ana Coto-Montes, Peter J. Crack, Jose L. Crespo, Alfredo Criollo, Valeria Crippa, Riccardo Cristofani, Tamas Csizmadia, Antonio Cuadrado, Bing Cui, Jun Cui, Yixian Cui, Yong Cui, Emmanuel Culetto, Andrea C. Cumino, Andrey V. Cybulsky, Mark J. Czaja, Stanislaw J. Czuczwar, Stefania D’Adamo, Marcello D’Amelio, Daniela D’Arcangelo, Andrew C. D’Lugos, Gabriella D’Orazi, James A. da Silva, Hormos Salimi Dafsari, Ruben K. Dagda, Yasin Dagdas, Maria Daglia, Xiaoxia Dai, Yun Dai, Yuyuan Dai, Jessica Dal Col, Paul Dalhaimer, Luisa Dalla Valle, Tobias Dallenga, Guillaume Dalmasso, Markus Damme, Ilaria Dando, Nico P. Dantuma, April L. Darling, Hiranmoy Das, Srinivasan Dasarathy, Santosh K. Dasari, Srikanta Dash, Oliver Daumke, Adrian N. Dauphinee, Jeffrey S. Davies, Valeria A. Dávila, Roger J. Davis, Tanja Davis, Sharadha Dayalan Naidu, Francesca De Amicis, Karolien De Bosscher, Francesca De Felice, Lucia De Franceschi, Chiara De Leonibus, Mayara G. de Mattos Barbosa, Guido R.Y. De Meyer, Angelo De Milito, Cosimo De Nunzio, Clara De Palma, Mauro De Santi, Claudio De Virgilio, Daniela De Zio, Jayanta Debnath, Brian J. DeBosch, Jean-Paul Decuypere, Mark A. Deehan, Gianluca Deflorian, James DeGregori, Benjamin Dehay, Gabriel Del Rio, Joe R. Delaney, Lea M. D. Delbridge, Elizabeth Delorme-Axford, M. Victoria Delpino, Francesca Demarchi, Vilma Dembitz, Nicholas D. Demers, Hongbin Deng, Zhiqiang Deng, Joern Dengjel, Paul Dent, Donna Denton, Melvin L. DePamphilis, Channing J. Der, Vojo Deretic, Albert Descoteaux, Laura Devis, Sushil Devkota, Olivier Devuyst, Grant Dewson, Mahendiran Dharmasivam, Rohan Dhiman, Diego di Bernardo, Manlio Di Cristina, Fabio Di Domenico, Pietro Di Fazio, Alessio Di Fonzo, Giovanni Di Guardo, Gianni M. Di Guglielmo, Luca Di Leo, Chiara Di Malta, Alessia Di Nardo, Martina Di Rienzo, Federica Di Sano, George Diallinas, Jiajie Diao, Guillermo Diaz-Araya, Inés Díaz-Laviada, Jared M. Dickinson, Marc Diederich, Mélanie Dieudé, Ivan Dikic, Shiping Ding, Wen-Xing Ding, Luciana Dini, Jelena Dinić, Miroslav Dinic, Albena T. Dinkova-Kostova, Marc S. Dionne, Jörg H.W. Distler, Abhinav Diwan, Ian M.C. Dixon, Mojgan Djavaheri-Mergny, Ina Dobrinski, Oxana Dobrovinskaya, Radek Dobrowolski, Renwick C.J. Dobson, Jelena Đokić, Serap Dokmeci Emre, Massimo Donadelli, Bo Dong, Xiaonan Dong, Zhiwu Dong, Gerald W. Dorn, Volker Dotsch, Huan Dou, Juan Dou, Moataz Dowaidar, Sami Dridi, Liat Drucker, Ailian Du, Caigan Du, Guangwei Du, Hai-Ning Du, Li-Lin Du, André du Toit, Shao-Bin Duan, Xiaoqiong Duan, Sónia P. Duarte, Anna Dubrovska, Elaine A. Dunlop, Nicolas Dupont, Raúl V. Durán, Bilikere S. Dwarakanath, Sergey A. Dyshlovoy, Darius Ebrahimi-Fakhari, Leopold Eckhart, Charles L. Edelstein, Thomas Efferth, Eftekhar Eftekharpour, Ludwig Eichinger, Nabil Eid, Tobias Eisenberg, N. Tony Eissa, Sanaa Eissa, Miriam Ejarque, Abdeljabar El Andaloussi, Nazira El-Hage, Shahenda El-Naggar, Anna Maria Eleuteri, Eman S. El-Shafey, Mohamed Elgendy, Aristides G. Eliopoulos, María M. Elizalde, Philip M. Elks, Hans-Peter Elsasser, Eslam S. Elsherbiny, Brooke M. Emerling, N. C. Tolga Emre, Christina H. Eng, Nikolai Engedal, Anna-Mart Engelbrecht, Agnete S.T. Engelsen, Jorrit M. Enserink, Ricardo Escalante, Audrey Esclatine, Mafalda Escobar-Henriques, Eeva-Liisa Eskelinen, Lucile Espert, Makandjou-Ola Eusebio, Gemma Fabrias, Cinzia Fabrizi, Antonio Facchiano, Francesco Facchiano, Bengt Fadeel, Claudio Fader, Alex C. Faesen, W. Douglas Fairlie, Alberto Falcó, Bjorn H. Falkenburger, Daping Fan, Jie Fan, Yanbo Fan, Evandro F. Fang, Yanshan Fang, Yognqi Fang, Manolis Fanto, Tamar Farfel-Becker, Mathias Faure, Gholamreza Fazeli, Anthony O. Fedele, Arthur M. Feldman, Du Feng, Jiachun Feng, Lifeng Feng, Yibin Feng, Yuchen Feng, Wei Feng, Thais Fenz Araujo, Thomas A. Ferguson, Álvaro F. Fernández, Jose C. Fernandez-Checa, Sonia Fernández-Veledo, Alisdair R. Fernie, Anthony W. Ferrante, Alessandra Ferraresi, Merari F. Ferrari, Julio C.B. Ferreira, Susan Ferro-Novick, Antonio Figueras, Riccardo Filadi, Nicoletta Filigheddu, Eduardo Filippi-Chiela, Giuseppe Filomeni, Gian Maria Fimia, Vittorio Fineschi, Francesca Finetti, Steven Finkbeiner, Edward A. Fisher, Paul B. Fisher, Flavio Flamigni, Steven J. Fliesler, Trude H. Flo, Ida Florance, Oliver Florey, Tullio Florio, Erika Fodor, Carlo Follo, Edward A. Fon, Antonella Forlino, Francesco Fornai, Paola Fortini, Anna Fracassi, Alessandro Fraldi, Brunella Franco, Rodrigo Franco, Flavia Franconi, Lisa B. Frankel, Scott L. Friedman, Leopold F. Fröhlich, Gema Frühbeck, Jose M. Fuentes, Yukio Fujiki, Naonobu Fujita, Yuuki Fujiwara, Mitsunori Fukuda, Simone Fulda, Luc Furic, Norihiko Furuya, Carmela Fusco, Michaela U. Gack, Lidia Gaffke, Sehamuddin Galadari, Alessia Galasso, Maria F. Galindo, Sachith Gallolu Kankanamalage, Lorenzo Galluzzi, Vincent Galy, Noor Gammoh, Boyi Gan, Ian G. Ganley, Feng Gao, Hui Gao, Minghui Gao, Ping Gao, Shou-Jiang Gao, Wentao Gao, Xiaobo Gao, Ana Garcera, Maria Noé Garcia, Verónica E. Garcia, Francisco García-Del Portillo, Vega Garcia-Escudero, Aracely Garcia-Garcia, Marina Garcia-Macia, Diana García-Moreno, Carmen Garcia-Ruiz, Patricia García-Sanz, Abhishek D. Garg, Ricardo Gargini, Tina Garofalo, Robert F. Garry, Nils C. Gassen, Damian Gatica, Liang Ge, Wanzhong Ge, Ruth Geiss-Friedlander, Cecilia Gelfi, Pascal Genschik, Ian E. Gentle, Valeria Gerbino, Christoph Gerhardt, Kyla Germain, Marc Germain, David A. Gewirtz, Elham Ghasemipour Afshar, Saeid Ghavami, Alessandra Ghigo, Manosij Ghosh, Georgios Giamas, Claudia Giampietri, Alexandra Giatromanolaki, Gary E. Gibson, Spencer B. Gibson, Vanessa Ginet, Edward Giniger, Carlotta Giorgi, Henrique Girao, Stephen E. Girardin, Mridhula Giridharan, Sandy Giuliano, Cecilia Giulivi, Sylvie Giuriato, Julien Giustiniani, Alexander Gluschko, Veit Goder, Alexander Goginashvili, Jakub Golab, David C. Goldstone, Anna Golebiewska, Luciana R. Gomes, Rodrigo Gomez, Rubén Gómez-Sánchez, Maria Catalina Gomez-Puerto, Raquel Gomez-Sintes, Qingqiu Gong, Felix M. Goni, Javier González-Gallego, Tomas Gonzalez-Hernandez, Rosa A. Gonzalez-Polo, Jose A. Gonzalez-Reyes, Patricia González-Rodríguez, Ing Swie Goping, Marina S. Gorbatyuk, Nikolai V. Gorbunov, Kıvanç Görgülü, Roxana M. Gorojod, Sharon M. Gorski, Sandro Goruppi, Cecilia Gotor, Roberta A. Gottlieb, Illana Gozes, Devrim Gozuacik, Martin Graef, Markus H. Gräler, Veronica Granatiero, Daniel Grasso, Joshua P. Gray, Douglas R. Green, Alexander Greenhough, Stephen L. Gregory, Edward F. Griffin, Mark W. Grinstaff, Frederic Gros, Charles Grose, Angelina S. Gross, Florian Gruber, Paolo Grumati, Tilman Grune, Xueyan Gu, Jun-Lin Guan, Carlos M. Guardia, Kishore Guda, Flora Guerra, Consuelo Guerri, Prasun Guha, Carlos Guillén, Shashi Gujar, Anna Gukovskaya, Ilya Gukovsky, Jan Gunst, Andreas Günther, Anyonya R. Guntur, Chuanyong Guo, Chun Guo, Hongqing Guo, Lian-Wang Guo, Ming Guo, Pawan Gupta, Shashi Kumar Gupta, Swapnil Gupta, Veer Bala Gupta, Vivek Gupta, Asa B. Gustafsson, David D. Gutterman, Ranjitha H.B., Annakaisa Haapasalo, James E. Haber, Aleksandra Hać, Shinji Hadano, Anders J. Hafrén, Mansour Haidar, Belinda S. Hall, Gunnel Halldén, Anne Hamacher-Brady, Andrea Hamann, Maho Hamasaki, Weidong Han, Malene Hansen, Phyllis I.  Hanson, Zijian Hao, Masaru Harada, Ljubica Harhaji-Trajkovic, Nirmala Hariharan, Nigil Haroon, James Harris, Takafumi Hasegawa, Noor Hasima Nagoor, Jeffrey A. Haspel, Volker Haucke, Wayne D. Hawkins, Bruce A. Hay, Cole M. Haynes, Soren B. Hayrabedyan, Thomas S. Hays, Congcong He, Qin He, Rong-Rong He, You-Wen He, Yu-Ying He, Yasser Heakal, Alexander M. Heberle, J. Fielding Hejtmancik, Gudmundur Vignir  Helgason, Vanessa Henkel, Marc Herb, Alexander Hergovich, Anna Herman-Antosiewicz, Agustín Hernández, Carlos Hernandez, Sergio Hernandez-Diaz, Virginia Hernandez-Gea, Amaury Herpin, Judit Herreros, Javier H. Hervás, Daniel Hesselson, Claudio Hetz, Volker T. Heussler, Yujiro Higuchi, Sabine Hilfiker, Joseph A. Hill, William S. Hlavacek, Emmanuel A. Ho, Idy H.T. Ho, Philip Wing-Lok Ho, Shu-Leong Ho, Wan Yun Ho, G. Aaron Hobbs, Mark Hochstrasser, Peter H.M. Hoet, Daniel Hofius, Paul Hofman, Annika Höhn, Carina I. Holmberg, Jose R. Hombrebueno, Chang-Won Hong, Yi-Ren Hong, Lora V. Hooper, Thorsten Hoppe, Rastislav Horos, Yujin Hoshida, I-Lun Hsin, Hsin-Yun Hsu, Bing Hu, Dong Hu, Li-Fang Hu, Ming Chang Hu, Ronggui Hu, Wei Hu, Yu-Chen Hu, Zhuo-Wei Hu, Fang Hua, Jinlian Hua, Yingqi Hua, Chongmin Huan, Canhua Huang, Chuanshu Huang, Chuanxin Huang, Chunling Huang, Haishan Huang, Kun Huang, Michael L.H. Huang, Rui Huang, Shan Huang, Tianzhi Huang, Xing Huang, Yuxiang Jack Huang, Tobias B. Huber, Virginie Hubert, Christian A. Hubner, Stephanie M. Hughes, William E. Hughes, Magali Humbert, Gerhard Hummer, James H. Hurley, Sabah Hussain, Salik Hussain, Patrick J. Hussey, Martina Hutabarat, Hui-Yun Hwang, Seungmin Hwang, Antonio Ieni, Fumiyo Ikeda, Yusuke Imagawa, Yuzuru Imai, Carol Imbriano, Masaya Imoto, Denise M. Inman, Ken Inoki, Juan Iovanna, Renato V. Iozzo, Giuseppe Ippolito, Javier E. Irazoqui, Pablo Iribarren, Mohd Ishaq, Makoto Ishikawa, Nestor Ishimwe, Ciro Isidoro, Nahed Ismail, Shohreh Issazadeh-Navikas, Eisuke Itakura, Daisuke Ito, Davor Ivankovic, Saška Ivanova, Anand Krishnan V. Iyer, José M. Izquierdo, Masanori Izumi, Marja Jäättelä, Majid Sakhi Jabir, William T. Jackson, Nadia Jacobo-Herrera, Anne-Claire Jacomin, Elise Jacquin, Pooja Jadiya, Hartmut Jaeschke, Chinnaswamy Jagannath, Arjen J. Jakobi, Johan Jakobsson, Bassam Janji, Pidder Jansen-Dürr, Patric J. Jansson, Jonathan Jantsch, Sławomir Januszewski, Alagie Jassey, Steve Jean, Hélène Jeltsch-David, Pavla Jendelova, Andreas Jenny, Thomas E. Jensen, Niels Jessen, Jenna L. Jewell, Jing Ji, Lijun Jia, Rui Jia, Liwen Jiang, Qing Jiang, Richeng Jiang, Teng Jiang, Xuejun Jiang, Yu Jiang, Maria Jimenez-Sanchez, Eun-Jung Jin, Fengyan Jin, Hongchuan Jin, Li Jin, Luqi Jin, Meiyan Jin, Si Jin, Eun-Kyeong Jo, Carine Joffre, Terje Johansen, Gail V.W. Johnson, Simon A. Johnston, Eija Jokitalo, Mohit Kumar Jolly, Leo A.B. Joosten, Joaquin Jordan, Bertrand Joseph, Dianwen Ju, Jeong-Sun Ju, Jingfang Ju, Esmeralda Juárez, Delphine Judith, Gábor Juhász, Youngsoo Jun, Chang Hwa Jung, Sung-Chul Jung, Yong Keun Jung, Heinz Jungbluth, Johannes Jungverdorben, Steffen Just, Kai Kaarniranta, Allen Kaasik, Tomohiro Kabuta, Daniel Kaganovich, Alon Kahana, Renate Kain, Shinjo Kajimura, Maria Kalamvoki, Manjula Kalia, Danuta S. Kalinowski, Nina Kaludercic, Ioanna Kalvari, Joanna Kaminska, Vitaliy O. Kaminskyy, Hiromitsu Kanamori, Keizo Kanasaki, Chanhee Kang, Rui Kang, Sang Sun Kang, Senthilvelrajan Kaniyappan, Tomotake Kanki, Thirumala-Devi Kanneganti, Anumantha G. Kanthasamy, Arthi Kanthasamy, Marc Kantorow, Orsolya Kapuy, Michalis V. Karamouzis, Md. Razaul Karim, Parimal Karmakar, Rajesh G. Katare, Masaru Kato, Stefan H.E. Kaufmann, Anu Kauppinen, Gur P. Kaushal, Susmita Kaushik, Kiyoshi Kawasaki, Kemal Kazan, Po-Yuan Ke, Damien J. Keating, Ursula Keber, John H. Kehrl, Kate E. Keller, Christian W. Keller, Jongsook Kim Kemper, Candia M. Kenific, Oliver Kepp, Stephanie Kermorgant, Andreas Kern, Robin Ketteler, Tom G. Keulers, Boris Khalfin, Hany Khalil, Bilon Khambu, Shahid Y. Khan, Vinoth Kumar Megraj Khandelwal, Rekha Khandia, Widuri Kho, Noopur V. Khobrekar, Sataree Khuansuwan, Mukhran Khundadze, Samuel A. Killackey, Dasol Kim, Deok Ryong Kim, Do-Hyung Kim, Dong-Eun Kim, Eun Young Kim, Eun-Kyoung Kim, Hak-Rim Kim, Hee-Sik Kim, Hyung-Ryong Kim, Jeong Hun Kim, Jin Kyung Kim, Jin-Hoi Kim, Joungmok Kim, Ju Hwan Kim, Keun Il Kim, Peter K. Kim, Seong-Jun Kim, Scot R. Kimball, Adi Kimchi, Alec C. Kimmelman, Tomonori Kimura, Matthew A. King, Kerri J. Kinghorn, Conan G. Kinsey, Vladimir Kirkin, Lorrie A. Kirshenbaum, Sergey L. Kiselev, Shuji Kishi, Katsuhiko Kitamoto, Yasushi Kitaoka, Kaio Kitazato, Richard N. Kitsis, Josef T. Kittler, Ole Kjaerulff, Peter S. Klein, Thomas Klopstock, Jochen Klucken, Helene Knævelsrud, Roland L. Knorr, Ben C.B. Ko, Fred Ko, Jiunn-Liang Ko, Hotaka Kobayashi, Satoru Kobayashi, Ina Koch, Jan C. Koch, Ulrich Koenig, Donat Kögel, Young Ho Koh, Masato Koike, Sepp D. Kohlwein, Nur M. Kocaturk, Masaaki Komatsu, Jeannette König, Toru Kono, Benjamin T. Kopp, Tamas Korcsmaros, Gözde Korkmaz, Viktor I. Korolchuk, Mónica Suárez Korsnes, Ali Koskela, Janaiah Kota, Yaichiro Kotake, Monica L. Kotler, Yanjun Kou, Michael I. Koukourakis, Evangelos Koustas, Attila L. Kovacs, Tibor Kovács, Daisuke Koya, Tomohiro Kozako, Claudine Kraft, Dimitri Krainc, Helmut Krämer, Anna D. Krasnodembskaya, Carole Kretz-Remy, Guido Kroemer, Nicholas T. Ktistakis, Kazuyuki Kuchitsu, Sabine Kuenen, Lars Kuerschner, Thomas Kukar, Ajay Kumar, Ashok Kumar, Deepak Kumar, Dhiraj Kumar, Sharad Kumar, Shinji Kume, Caroline Kumsta, Chanakya N. Kundu, Mondira Kundu, Ajaikumar B. Kunnumakkara, Lukasz Kurgan, Tatiana G. Kutateladze, Ozlem Kutlu, SeongAe Kwak, Ho Jeong Kwon, Taeg Kyu Kwon, Yong Tae Kwon, Irene Kyrmizi, Albert La Spada, Patrick Labonté, Sylvain Ladoire, Ilaria Laface, Frank Lafont, Diane C. Lagace, Vikramjit Lahiri, Zhibing Lai, Angela S. Laird, Aparna Lakkaraju, Trond Lamark, Sheng-Hui Lan, Ane Landajuela, Darius J. R. Lane, Jon D. Lane, Charles H. Lang, Carsten Lange, Ülo Langel, Rupert Langer, Pierre Lapaquette, Jocelyn Laporte, Nicholas F. LaRusso, Isabel Lastres-Becker, Wilson Chun Yu Lau, Gordon W. Laurie, Sergio Lavandero, Betty Yuen Kwan Law, Helen Ka-wai Law, Rob Layfield, Weidong Le, Herve Le Stunff, Alexandre Y. Leary, Jean-Jacques Lebrun, Lionel Y.W. Leck, Jean-Philippe Leduc-Gaudet, Changwook Lee, Chung-Pei Lee, Da-Hye Lee, Edward B. Lee, Erinna F. Lee, Gyun Min Lee, He-Jin Lee, Heung Kyu Lee, Jae Man Lee, Jason S. Lee, Jin-A Lee, Joo-Yong Lee, Jun Hee Lee, Michael Lee, Min Goo Lee, Min Jae Lee, Myung-Shik Lee, Sang Yoon Lee, Seung-Jae Lee, Stella Y. Lee, Sung Bae Lee, Won Hee Lee, Ying-Ray Lee, Yong-ho Lee, Youngil Lee, Christophe Lefebvre, Renaud Legouis, Yu L. Lei, Yuchen Lei, Sergey Leikin, Gerd Leitinger, Leticia Lemus, Shuilong Leng, Olivia Lenoir, Guido Lenz, Heinz Josef Lenz, Paola Lenzi, Yolanda León, Andréia M. Leopoldino, Christoph Leschczyk, Stina Leskelä, Elisabeth Letellier, Chi-Ting Leung, Po Sing Leung, Jeremy S. Leventhal, Beth Levine, Patrick A. Lewis, Klaus Ley, Bin Li, Da-Qiang Li, Jianming Li, Jing Li, Jiong Li, Ke Li, Liwu Li, Mei Li, Min Li, Min Li, Ming Li, Mingchuan Li, Pin-Lan Li, Ming-Qing Li, Qing Li, Sheng Li, Tiangang Li, Wei Li, Wenming Li, Xue Li, Yi-Ping Li, Yuan Li, Zhiqiang Li, Zhiyong Li, Zhiyuan Li, Jiqin Lian, Chengyu Liang, Qiangrong Liang, Weicheng Liang, Yongheng Liang, YongTian Liang, Guanghong Liao, Lujian Liao, Mingzhi Liao, Yung-Feng Liao, Mariangela Librizzi, Pearl P. Y. Lie, Mary A. Lilly, Hyunjung J. Lim, Thania R.R. Lima, Federica Limana, Chao Lin, Chih-Wen Lin, Dar-Shong Lin, Fu-Cheng Lin, Jiandie D. Lin, Kurt M. Lin, Kwang-Huei Lin, Liang-Tzung Lin, Pei-Hui Lin, Qiong Lin, Shaofeng Lin, Su-Ju Lin, Wenyu Lin, Xueying Lin, Yao-Xin Lin, Yee-Shin Lin, Rafael Linden, Paula Lindner, Shuo-Chien Ling, Paul Lingor, Amelia K. Linnemann, Yih-Cherng Liou, Marta M. Lipinski, Saška Lipovšek, Vitor A. Lira, Natalia Lisiak, Paloma B. Liton, Chao Liu, Ching-Hsuan Liu, Chun-Feng Liu, Cui Hua Liu, Fang Liu, Hao Liu, Hsiao-Sheng Liu, Hua-feng Liu, Huifang Liu, Jia Liu, Jing Liu, Julia Liu, Leyuan Liu, Longhua Liu, Meilian Liu, Qin Liu, Wei Liu, Wende Liu, Xiao-Hong Liu, Xiaodong Liu, Xingguo Liu, Xu Liu, Xuedong Liu, Yanfen Liu, Yang Liu, Yang Liu, Yueyang Liu, Yule Liu, J. Andrew Livingston, Gerard Lizard, Jose M. Lizcano, Senka Ljubojevic-Holzer, Matilde E. LLeonart, David Llobet-Navàs, Alicia Llorente, Chih Hung Lo, Damián Lobato-Márquez, Qi Long, Yun Chau Long, Ben Loos, Julia A. Loos, Manuela G. López, Guillermo López-Doménech, José Antonio López-Guerrero, Ana T. López-Jiménez, Óscar López-Pérez, Israel López-Valero, Magdalena J. Lorenowicz, Mar Lorente, Peter Lorincz, Laura Lossi, Sophie Lotersztajn, Penny E. Lovat, Jonathan F. 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Martins, Tania Martins-Marques, Emanuele Marzetti, Shashank Masaldan, Celine Masclaux-Daubresse, Douglas G. Mashek, Valentina Massa, Lourdes Massieu, Glenn R. Masson, Laura Masuelli, Anatoliy I. Masyuk, Tetyana V. Masyuk, Paola Matarrese, Ander Matheu, Satoaki Matoba, Sachiko Matsuzaki, Pamela Mattar, Alessandro Matte, Domenico Mattoscio, José L. Mauriz, Mario Mauthe, Caroline Mauvezin, Emanual Maverakis, Paola Maycotte, Johanna Mayer, Gianluigi Mazzoccoli, Cristina Mazzoni, Joseph R. Mazzulli, Nami McCarty, Christine McDonald, Mitchell R. McGill, Sharon L. McKenna, BethAnn McLaughlin, Fionn McLoughlin, Mark A. McNiven, Thomas G. McWilliams, Fatima Mechta-Grigoriou, Tania Catarina Medeiros, Diego L. Medina, Lynn A. Megeney, Klara Megyeri, Maryam Mehrpour, Jawahar L. Mehta, Alfred J. Meijer, Annemarie H. Meijer, Jakob Mejlvang, Alicia Meléndez, Annette Melk, Gonen Memisoglu, Alexandrina F. Mendes, Delong Meng, Fei Meng, Tian Meng, Rubem Menna-Barreto, Manoj B. Menon, Carol Mercer, Anne E. Mercier, Jean-Louis Mergny, Adalberto Merighi, Seth D. Merkley, Giuseppe Merla, Volker Meske, Ana Cecilia Mestre, Shree Padma Metur, Christian Meyer, Hemmo Meyer, Wenyi Mi, Jeanne Mialet-Perez, Junying Miao, Lucia Micale, Yasuo Miki, Enrico Milan, Małgorzata Milczarek, Dana L. Miller, Samuel I. Miller, Silke Miller, Steven W. Millward, Ira Milosevic, Elena A. Minina, Hamed Mirzaei, Hamid Reza Mirzaei, Mehdi Mirzaei, Amit Mishra, Nandita Mishra, Paras Kumar Mishra, Maja Misirkic Marjanovic, Roberta Misasi, Amit Misra, Gabriella Misso, Claire Mitchell, Geraldine Mitou, Tetsuji Miura, Shigeki Miyamoto, Makoto Miyazaki, Mitsunori Miyazaki, Taiga Miyazaki, Keisuke Miyazawa, Noboru Mizushima, Trine H. Mogensen, Baharia Mograbi, Reza Mohammadinejad, Yasir Mohamud, Abhishek Mohanty, Sipra Mohapatra, Torsten Möhlmann, Asif Mohmmed, Anna Moles, Kelle H. Moley, Maurizio Molinari, Vincenzo Mollace, Andreas Buch Møller, Bertrand Mollereau, Faustino Mollinedo, Costanza Montagna, Mervyn J. Monteiro, Andrea Montella, L. Ruth Montes, Barbara Montico, Vinod K. Mony, Giacomo Monzio Compagnoni, Michael N. Moore, Mohammad A. Moosavi, Ana L. Mora, Marina Mora, David Morales-Alamo, Rosario Moratalla, Paula I. Moreira, Elena Morelli, Sandra Moreno, Daniel Moreno-Blas, Viviana Moresi, Benjamin Morga, Alwena H. Morgan, Fabrice Morin, Hideaki Morishita, Orson L. Moritz, Mariko Moriyama, Yuji Moriyasu, Manuela Morleo, Eugenia Morselli, Jose F. Moruno-Manchon, Jorge Moscat, Serge Mostowy, Elisa Motori, Andrea Felinto Moura, Naima Moustaid-Moussa, Maria Mrakovcic, Gabriel Muciño-Hernández, Anupam Mukherjee, Subhadip Mukhopadhyay, Jean M. Mulcahy Levy, Victoriano Mulero, Sylviane Muller, Christian Münch, Ashok Munjal, Pura Munoz-Canoves, Teresa Muñoz-Galdeano, Christian Münz, Tomokazu Murakawa, Claudia Muratori, Brona M. Murphy, J. 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Nixon, Annalisa Nobili, Clevio Nobrega, Takeshi Noda, Uxía Nogueira-Recalde, Trevor M. Nolan, Ivan Nombela, Ivana Novak, Beatriz Novoa, Takashi Nozawa, Nobuyuki Nukina, Carmen Nussbaum-Krammer, Jesper Nylandsted, Tracey R. O’Donovan, Seónadh M. O’Leary, Eyleen J. O’Rourke, Mary P. O’Sullivan, Timothy E. O’Sullivan, Salvatore Oddo, Ina Oehme, Michinaga Ogawa, Eric Ogier-Denis, Margret H. Ogmundsdottir, Besim Ogretmen, Goo Taeg Oh, Seon-Hee Oh, Young J. Oh, Takashi Ohama, Yohei Ohashi, Masaki Ohmuraya, Vasileios Oikonomou, Rani Ojha, Koji Okamoto, Hitoshi Okazawa, Masahide Oku, Sara Oliván, Jorge M. A. Oliveira, Michael Ollmann, James A. Olzmann, Shakib Omari, M. Bishr Omary, Gizem Önal, Martin Ondrej, Sang-Bing Ong, Sang-Ging Ong, Anna Onnis, Juan A. Orellana, Sara Orellana-Muñoz, Maria Del Mar Ortega-Villaizan, Xilma R. Ortiz-Gonzalez, Elena Ortona, Heinz D. Osiewacz, Abdel-Hamid K. Osman, Rosario Osta, Marisa S. Otegui, Kinya Otsu, Christiane Ott, Luisa Ottobrini, Jing-hsiung James Ou, Tiago F. Outeiro, Inger Oynebraten, Melek Ozturk, Gilles Pagès, Susanta Pahari, Marta Pajares, Utpal B. Pajvani, Rituraj Pal, Simona Paladino, Nicolas Pallet, Michela Palmieri, Giuseppe Palmisano, Camilla Palumbo, Francesco Pampaloni, Lifeng Pan, Qingjun Pan, Wenliang Pan, Xin Pan, Ganna Panasyuk, Rahul Pandey, Udai B. Pandey, Vrajesh Pandya, Francesco Paneni, Shirley Y. Pang, Elisa Panzarini, Daniela L. Papademetrio, Elena Papaleo, Daniel Papinski, Diana Papp, Eun Chan Park, Hwan Tae Park, Ji-Man Park, Jong-In Park, Joon Tae Park, Junsoo Park, Sang Chul Park, Sang-Youel Park, Abraham H. Parola, Jan B. Parys, Adrien Pasquier, Benoit Pasquier, João F. Passos, Nunzia Pastore, Hemal H. Patel, Daniel Patschan, Sophie Pattingre, Gustavo Pedraza-Alva, Jose Pedraza-Chaverri, Zully Pedrozo, Gang Pei, Jianming Pei, Hadas Peled-Zehavi, Joaquín M. Pellegrini, Joffrey Pelletier, Miguel A. 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Rojo, Krzysztof Rolka, Vanina Romanello, Luigina Romani, Alessandra Romano, Patricia S. Romano, David Romeo-Guitart, Luis C. Romero, Montserrat Romero, Joseph C. Roney, Christopher Rongo, Sante Roperto, Mathias T. Rosenfeldt, Philip Rosenstiel, Anne G. Rosenwald, Kevin A. Roth, Lynn Roth, Steven Roth, Kasper M.A. Rouschop, Benoit D. Roussel, Sophie Roux, Patrizia Rovere-Querini, Ajit Roy, Aurore Rozieres, Diego Ruano, David C. Rubinsztein, Maria P. Rubtsova, Klaus Ruckdeschel, Christoph Ruckenstuhl, Emil Rudolf, Rüdiger Rudolf, Alessandra Ruggieri, Avnika Ashok Ruparelia, Paola Rusmini, Ryan R. Russell, Gian Luigi Russo, Maria Russo, Rossella Russo, Oxana O. Ryabaya, Kevin M. Ryan, Kwon-Yul Ryu, Maria Sabater-Arcis, Ulka Sachdev, Michael Sacher, Carsten Sachse, Abhishek Sadhu, Junichi Sadoshima, Nathaniel Safren, Paul Saftig, Antonia P. Sagona, Gaurav Sahay, Amirhossein Sahebkar, Mustafa Sahin, Ozgur Sahin, Sumit Sahni, Nayuta Saito, Shigeru Saito, Tsunenori Saito, Ryohei Sakai, Yasuyoshi Sakai, Jun-Ichi Sakamaki, Kalle Saksela, Gloria Salazar, Anna Salazar-Degracia, Ghasem H. Salekdeh, Ashok K. Saluja, Belém Sampaio-Marques, Maria Cecilia Sanchez, Jose A. Sanchez-Alcazar, Victoria Sanchez-Vera, Vanessa Sancho-Shimizu, J. Thomas Sanderson, Marco Sandri, Stefano Santaguida, Laura Santambrogio, Magda M. Santana, Giorgio Santoni, Alberto Sanz, Pascual Sanz, Shweta Saran, Marco Sardiello, Timothy J. Sargeant, Apurva Sarin, Chinmoy Sarkar, Sovan Sarkar, Maria-Rosa Sarrias, Surajit Sarkar, Dipanka Tanu Sarmah, Jaakko Sarparanta, Aishwarya Sathyanarayan, Ranganayaki Sathyanarayanan, K. Matthew Scaglione, Francesca Scatozza, Liliana Schaefer, Zachary T. Schafer, Ulrich E. Schaible, Anthony H.V. Schapira, Michael Scharl, Hermann M. Schatzl, Catherine H. 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Epithelial Colonies In Vitro Elongate through Collective Effects
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DOI: 10.7554/elife.57730

Benjamin Dalton, Ivo F. Sbalzarini, Itsuo Hanasaki
Fundamentals of the logarithmic measure for revealing multimodal diffusion
Biophys J, Art. No. (Jan 2021)
DOI: 10.1016/j.bpj.2021.01.001

Karl B. Hoffmann and Ivo F. Sbalzarini
Robustness of topological defects in discrete domains
Phys. Rev. E, 103:012602 (Jan 2021)
DOI: 10.1103/PhysRevE.103.012602

2020

206 publication(s) listed

Basusree Ghosh, Rudrarup Bose, T-Y. Dora Tang
Can coacervation unify disparate hypotheses in the origin of cellular life?
Current Opinion in Colloid & Interface Science 52:101415 (Dec 31, 2020)
DOI: 10.1016/j.cocis.2020.101415

Li Ding, Maciej Paszkowski-Rogacz, Jovan Mircetic, Debojyoti Chakraborty, Frank Buchholz
The Paf1 complex positively regulates enhancer activity in mouse embryonic stem cells
Life Sci. Alliance 4(3):e202000792 (Dec 29, 2020)
DOI: 10.26508/lsa.202000792

Gokul Kesavan, Florian Raible, Mansi Gupta, Anja Machate, Dilara Yilmaz, Michael Brand
Isthmin1, a secreted signaling protein, acts downstream of diverse embryonic patterning centers in development
Cell Tissue Res 383(3):987–1002 (Dec 28, 2020)
DOI: 10.1007/s00441-020-03318-2

Dahmann C, Classen AK
Charting the unknown currents of cellular flows and forces
Development, 147(24):dev186403. (Dec 21, 2020)
DOI: 10.1242/dev.186403

Kaushikaram Subramanian, Heike Petzold, Benjamin Seelbinder, Lena Hersemann, Ina Nüsslein, Moritz Kreysing
Optical plasticity of mammalian cells
Journal of Biophotonics 14(4) (Dec 21, 2020)
DOI: 10.1002/jbio.202000457

Johanna Grinat, Julian Heuberger, Ramon Oliveira Vidal, Neha Goveas, Frauke Kosel, Antoni Berenguer-Llergo, Andrea Kranz, Annika Wulf-Goldenberg, Diana Behrens, Bálint Melcher, Sascha Sauer, Michael Vieth, Eduard Batlle, A. Francis Stewart, Walter Birchmeier
The epigenetic regulator Mll1 is required for Wnt-driven intestinal tumorigenesis and cancer stemness
Nat Commun 11(1), 6422 (Dec 21, 2020)
DOI: 10.1038/s41467-020-20222-z

Elisa Maria Rieckhoff, Frederic Berndt, Maria Elsner, Stefan Golfier, Franziska Decker, Keisuke Ishihara, Jan Brugués
Spindle Scaling Is Governed by Cell Boundary Regulation of Microtubule Nucleation
Current Biology 30, 4973–4983 (Dec 21, 2020)
DOI: 10.1016/j.cub.2020.10.093

Vasiliki Tsata, Volker Kroehne, Daniel Wehner, Fabian Rost, Christian Lange, Cornelia Hoppe, Thomas Kurth, Susanne Reinhardt, Andreas Petzold, Andreas Dahl, Markus Loeffler, Michell M. Reimer, Michael Brand
Reactive oligodendrocyte progenitor cells (re-)myelinate the regenerating zebrafish spinal cord
Development 147(24):dev193946 (Dec 16, 2020)
DOI: 10.1242/dev.193946

Andreas Müller, Deborah Schmidt, C. Shan Xu, Song Pang, Joyson Verner D’Costa, Susanne Kretschmar, Carla Münster, Thomas Kurth, Florian Jug, Martin Weigert, Harald F. Hess, Michele Solimena
3D FIB-SEM reconstruction of microtubule–organelle interaction in whole primary mouse β cells
Journal of Cell Biology 220(2) (Dec 16, 2020)
DOI: 10.1083/jcb.202010039

Louise Jawerth, Elisabeth Fischer-Friedrich, Suropriya Saha, Jie Wang, Titus Franzmann, Xiaojie Zhang, Jenny Sachweh, Martine Ruer, Mahdiye Ijavi, Shambaditya Saha, Julia Mahamid, Anthony A. Hyman, Frank Jülicher
Protein Condensates as Aging Maxwell Fluids
Science 370(6522):1317–1323 (Dec 11, 2020)
DOI: 10.1126/science.aaw4951

Yuta Suzuki, Eugene W. Myers, Shinichi Morishita
Rapid and ongoing evolution of repetitive sequence structures in human centromeres
Sci. Adv. 6(50) (Dec 11, 2020)
DOI: 10.1126/sciadv.abd9230

André Scholich, Simon Syga, Hernán Morales-Navarrete, Fabián Segovia-Miranda, Hidenori Nonaka, Kirstin Meyer, Walter de Back, Lutz Brusch, Yannis Kalaidzidis, Marino Zerial, Frank Jülicher, Benjamin M. Friedrich
Quantification of nematic cell polarity in three-dimensional tissues
PLoS Comput Biol; 16(12): e1008412 (Dec 10, 2020)
DOI: 10.1371/journal.pcbi.1008412

Pierre Gillotay, Meghna Shankar, Benoit Haerlingen, Sema Elif Eski, Macarena Pozo-Morales, Inés Garteizgogeascoa, Susanne Reinhardt, Annekathrin Kränkel, Juliane Bläsche, Andreas Petzold, Nikolay Ninov, Gokul Kesavan, Christian Lange, Michael Brand, Anne Lefort, Frédérick Libert, Vincent Detours, Sabine Costagliola, Singh Sumeet Pal
Single-cell transcriptome analysis reveals thyrocyte diversity in the zebrafish thyroid gland
EMBO Rep 21(12):e50612 (Dec 3, 2020)
DOI: 10.15252/embr.202050612

Vijay S. Adusumilli, Tara L. Walker, Rupert W. Overall, Gesa M. Klatt, Salma A. Zeidan, Sara Zocher, Dilyana G. Kirova, Konstantinos Ntitsias, Tim J. Fischer, Alex M. Sykes, Susanne Reinhardt, Andreas Dahl, Jörg Mansfeld, Annette E. Rünker, Gerd Kempermann
ROS Dynamics Delineate Functional States of Hippocampal Neural Stem Cells and Link to Their Activity-Dependent Exit from Quiescence
Cell Stem Cell 28(2):300–314.e6 (Dec 3, 2020)
DOI: 10.1016/j.stem.2020.10.019

Lorella Marselli, Anthony Piron, Mara Suleiman, Maikel L. Colli, Xiaoyan Yi, Amna Khamis, Gaelle R. Carrat, Guy A. Rutter, Marco Bugliani, Laura Giusti, Maurizio Ronci, Mark Ibberson, Jean-Valery Turatsinze, Ugo Boggi, Paolo De Simone, Vincenzo De Tata, Miguel Lopes, Daniela Nasteska, Carmela De Luca, Marta Tesi, Emanuele Bosi, Pratibha Singh, Daniela Campani, Anke M. Schulte, Michele Solimena, Peter Hecht, Brian Rady, Ivona Bakaj, Alessandro Pocai, Lisa Norquay, Bernard Thorens, Mickaël Canouil, Philippe Froguel, Decio L. Eizirik, Miriam Cnop, Piero Marchetti
Persistent or Transient Human β Cell Dysfunction Induced by Metabolic Stress: Specific Signatures and Shared Gene Expression with Type 2 Diabetes
Cell Reports 33(9):108466 (Dec 1, 2020)
DOI: 10.1016/j.celrep.2020.108466

Alexandre Guillet, Edgar Roldán, Frank Jülicher
Extreme-value statistics of stochastic transport processes
New J. Phys. 22(12):123038 (Dec 1, 2020)
DOI: 10.1088/1367-2630/abcf69

Stephan Daetwyler, Carl D Modes, Reto Fiolka
Fiji plugin for annotating movies with custom arrows
Biol Open, 1;9(11):bio056200 (Dec 1, 2020)
DOI: 10.1242/bio.056200

Kristian Le Vay, Ben M. Carter, Daniel W. Watkins, T.-Y. Dora Tang, Valeska P. Ting, Helmut Cölfen, Robert P. Rambo, Andrew J. Smith, J. L. Ross Anderson, Adam W. Perriman
Controlling Protein Nanocage Assembly with Hydrostatic Pressure
J. Am. Chem. Soc. 142(49):20640–20650 (Nov 30, 2020)
DOI: 10.1021/jacs.0c07285

Alex H. M. Ng, Parastoo Khoshakhlagh, Jesus Eduardo Rojo Arias, Giovanni Pasquini, Kai Wang, Anka Swiersy, Seth L. Shipman, Evan Appleton, Kiavash Kiaee, Richie E. Kohman, Andyna Vernet, Matthew Dysart, Kathleen Leeper, Wren Saylor, Jeremy Y. Huang, Amanda Graveline, Jussi Taipale, David E. Hill, Marc Vidal, Juan M. Melero-Martin, Volker Busskamp, George M. Church
A comprehensive library of human transcription factors for cell fate engineering
Nat Biotechnol 39(4):510–519 (Nov 30, 2020)
DOI: 10.1038/s41587-020-0742-6

Stefan Rothe, Qian Zhang, Nektarios Koukourakis, Jrgen Czarske
Intensity-Only Mode Decomposition on Multimode Fibers Using a Densely Connected Convolutional Network
J. Lightwave Technol. 39(6):1672–1679 (Nov 30, 2020)
DOI: 10.1109/jlt.2020.3041374

Lydie Flasse, Coline Schewin, Anne Grapin-Botton
Pancreas morphogenesis: Branching in and then out
Current Topics in Developmental Biology 75–110 (Nov 27, 2020)
DOI: 10.1016/bs.ctdb.2020.10.006

Jennifer J. Lühr, Nils Alex, Lukas Amon, Martin Kräter, Markéta Kubánková, Erdinc Sezgin, Christian H. K. Lehmann, Lukas Heger, Gordon F. Heidkamp, Ana-Sunčana Smith, Vasily Zaburdaev, Rainer A. Böckmann, Ilya Levental, Michael L. Dustin, Christian Eggeling, Jochen Guck, Diana Dudziak
Maturation of Monocyte-Derived DCs Leads to Increased Cellular Stiffness, Higher Membrane Fluidity, and Changed Lipid Composition
Front. Immunol. 11 (Nov 27, 2020)
DOI: 10.3389/fimmu.2020.590121

Valentin Gensbittel, Martin Kräter, Sébastien Harlepp, Ignacio Busnelli, Jochen Guck, Jacky G. Goetz
Mechanical Adaptability of Tumor Cells in Metastasis
Developmental Cell 56(2):164–179 (Nov 24, 2020)
DOI: 10.1016/j.devcel.2020.10.011

Johannes Gürtler, Felix Greiffenhagen, Jakob Woisetschläger, Robert Kuschmierz, Jürgen Czarske
Seedingless measurement of density fluctuations and flow velocity using high-speed holographic interferometry in a swirl-stabilized flame
Optics and Lasers in Engineering 139:106481 (Nov 24, 2020)
DOI: 10.1016/j.optlaseng.2020.106481

Buket Ucar, Janko Kajtez, Bettina M. Foidl, Dimitri Eigel, Carsten Werner, Katherine R. Long, Jenny Emnéus, Joëlle Bizeau, Mihai Lomora, Abhay Pandit, Ben Newland, Christian Humpel
Biomaterial based strategies to reconstruct the nigrostriatal pathway in organotypic slice co-cultures
Acta Biomaterialia 121:250–262 (Nov 23, 2020)
DOI: 10.1016/j.actbio.2020.11.035

Allison Lewis, Rashmiparvathi Keshara, Yung Hae Kim, Anne Grapin-Botton
Self-organization of organoids from endoderm-derived cells
J Mol Med 99(4):449–462 (Nov 22, 2020)
DOI: 10.1007/s00109-020-02010-w

Ulrich Bonda, Anna Jaeschke, Anthony Lighterness, Jeremy Baldwin, Carsten Werner, Elena M. De-Juan-Pardo, Laura J. Bray
3D Quantification of Vascular-Like Structures in z Stack Confocal Images
STAR Protocols 1(3):100180 (Nov 21, 2020)
DOI: 10.1016/j.xpro.2020.100180

Gina A Monzon, Lara Scharrel, Ashwin DSouza, Verena Henrichs, Ludger Santen, Stefan Diez
Stable tug-of-war between kinesin-1 and cytoplasmic dynein upon different ATP and roadblock concentrations
J Cell Sci 133(22):jcs249938 (Nov 20, 2020)
DOI: 10.1242/jcs.249938

Sadra Bakhshandeh, Hubert M. Taïeb, Raimund Schlüßler, Kyoohyun Kim, Timon Beck, Anna Taubenberger, Jochen Guck, Amaia Cipitria
Optical quantification of intracellular mass density and cell mechanics in 3D mechanical confinement
Soft Matter 17(4):853–862 (Nov 20, 2020)
DOI: 10.1039/d0sm01556c

José M. Martín-Durán, Bruno C. Vellutini, Ferdinand Marlétaz, Viviana Cetrangolo, Nevena Cvetesic, Daniel Thiel, Simon Henriet, Xavier Grau-Bové, Allan M. Carrillo-Baltodano, Wenjia Gu, Alexandra Kerbl, Yamile Marquez, Nicolas Bekkouche, Daniel Chourrout, Jose Luis Gómez-Skarmeta, Manuel Irimia, Boris Lenhard, Katrine Worsaae, Andreas Hejnol
Conservative route to genome compaction in a miniature annelid
Nat Ecol Evol 5(2):231–242 (Nov 16, 2020)
DOI: 10.1038/s41559-020-01327-6

Xiaozhu Zhang, Dirk Witthaut, Marc Timme
Topological Determinants of Perturbation Spreading in Networks
Phys. Rev. Lett. 125(21), 218301 (Nov 16, 2020)
DOI: 10.1103/physrevlett.125.218301

Kritika Sharma, Tim U. Krohne, Volker Busskamp
The Rise of Retinal Organoids for Vision Research
IJMS 21(22):8484 (Nov 12, 2020)
DOI: 10.3390/ijms21228484

Alexandra B. Schroeder, Ellen T. A. Dobson, Curtis T. Rueden, Pavel Tomancak, Florian Jug, Kevin W. Eliceiri
The ImageJ ecosystem: Open‐source software for image visualization, processing, and analysis
Protein Science 30(1):234–249 (Nov 9, 2020)
DOI: 10.1002/pro.3993

Alexander Krause, Dirk Habich, Wolfgang Lehner
Scalable In-Memory Graph Pattern Matching on Symmetric Multiprocessor Systems
Communications in Computer and Information Science 49–62 (Nov 5, 2020)
DOI: 10.1007/978-3-030-61133-0_4

Ana Carolina D. Noseda, Lais S. Rodrigues, Adriano D.S. Targa, Jessica L. Ilkiw, Juliane Fagotti, Patricia D. dos Santos, Erika Cecon, Regina P. Markus, Michele Solimena, Ralf Jockers, Marcelo M.S. Lima
MT2 melatonin receptors expressed in the olfactory bulb modulate depressive-like behavior and olfaction in the 6-OHDA model of Parkinson's disease
European Journal of Pharmacology 891:173722 (Nov 5, 2020)
DOI: 10.1016/j.ejphar.2020.173722

Akanksha Jain, Vladimir Ulman, Arghyadip Mukherjee, Mangal Prakash, Marina B. Cuenca, Lokesh G. Pimpale, Stefan Münster, Robert Haase, Kristen A. Panfilio, Florian Jug, Stephan W. Grill, Pavel Tomancak, Anastasios Pavlopoulos
Regionalized tissue fluidization is required for epithelial gap closure during insect gastrulation
Nat Commun 11, 5604 (Nov 5, 2020)
DOI: 10.1038/s41467-020-19356-x

Saminathan Ramakrishnan, Sivaraman Subramaniam, Charlotte Kielar, Guido Grundmeier, A. Francis Stewart, Adrian Keller
Protein-Assisted Room-Temperature Assembly of Rigid, Immobile Holliday Junctions and Hierarchical DNA Nanostructures
Molecules 25(21):5099 (Nov 4, 2020)
DOI: 10.3390/molecules25215099

Shan Jiang, Johan Bourghardt Fagman, Changyan Chen, Simon Alberti, Beidong Liu
Protein phase separation and its role in tumorigenesis
eLife 9 (Nov 3, 2020)
DOI: 10.7554/elife.60264

Aryaman Gupta, Pietro Incardona, Ata Deniz Aydin, Stefan Gumhold, Ulrik Günther, Ivo F. Sbalzarini
An Architecture for Interactive In Situ Visualization and its Transparent Implementation in OpenFPM
ISAV’20 In Situ Infrastructures for Enabling Extreme-Scale Analysis and Visualization Pages 20–26 (Nov 2020)
DOI: 10.1145/3426462.3426472

Mads Borries, Younes Farhangi Barooji, Siham Yennek, Anne Grapin-Botton, Kirstine Berg-Sørensen, Lene B. Oddershede
Quantification of Visco-Elastic Properties of a Matrigel for Organoid Development as a Function of Polymer Concentration
Front. Phys. 8 (Oct 30, 2020)
DOI: 10.3389/fphy.2020.579168

Andreas F. Kautt, Claudius F. Kratochwil, Alexander Nater, Gonzalo Machado-Schiaffino, Melisa Olave, Frederico Henning, Julián Torres-Dowdall, Andreas Härer, C. Darrin Hulsey, Paolo Franchini, Martin Pippel, Eugene W. Myers, Axel Meyer
Contrasting signatures of genomic divergence during sympatric speciation
Nature 588(7836):106–111 (Oct 28, 2020)
DOI: 10.1038/s41586-020-2845-0

Omar Adame-Arana, Christoph A. Weber, Vasily Zaburdaev, Jacques Prost, Frank Jülicher
Liquid Phase Separation Controlled by pH
Biophys J. 119(8):1590–1605 (Oct 20, 2020)
DOI: 10.1016/j.bpj.2020.07.044

Anna K. L. Liess, Alena Kucerova, Kristian Schweimer, Dörte Schlesinger, Olexandr Dybkov, Henning Urlaub, Jörg Mansfeld, Sonja Lorenz
Dimerization regulates the human APC/C-associated ubiquitin-conjugating enzyme UBE2S
Sci. Signal. 13(654) (Oct 20, 2020)
DOI: 10.1126/scisignal.aba8208

Cristina Subiran Adrados, Qinghao Yu, Lizbeth Airais Bolaños Castro, Luis Alberto Rodriguez Cabrera, Maximina H Yun
Salamander-Eci: An optical clearing protocol for the three-dimensional exploration of regeneration
Dev Dyn 250(6):902-915 (Oct 20, 2020)
DOI: 10.1002/dvdy.264

Michael Günther, Philipp Oehme, Maik Thiele, Wolfgang Lehner
Learning from Textual Data in Database Systems
Proceedings of the 29th ACM International Conference on Information & Knowledge Management (Oct 19, 2020)
DOI: 10.1145/3340531.3412056

Sandeep Sreevalsan, Marietta Döring, Maciej Paszkowski‐Rogacz, Melanie Brux, Carolina Blanck, Marten Meyer, Frank Momburg, Frank Buchholz, Mirko Theis
MLLT6 maintains PD‐L1 expression and mediates tumor immune resistance
EMBO Reports 21(12) (Oct 16, 2020)
DOI: 10.15252/embr.202050155

Philip Bischoff, Marja Kornhuber, Sebastian Dunst, Jakob Zell, Beatrix Fauler, Thorsten Mielke, Anna V. Taubenberger, Jochen Guck, Michael Oelgeschläger, Gilbert Schönfelder
Estrogens Determine Adherens Junction Organization and E-Cadherin Clustering in Breast Cancer Cells via Amphiregulin
iScience 23(11):101683 (Oct 15, 2020)
DOI: 10.1016/j.isci.2020.101683

Deisy Morselli Gysi, Tiago de Miranda Fragoso, Fatemeh Zebardast, Wesley Bertoli, Volker Busskamp, Eivind Almaas, Katja Nowick
Whole transcriptomic network analysis using Co-expression Differential Network Analysis (CoDiNA)
PLoS ONE 15(10):e0240523 (Oct 15, 2020)
DOI: 10.1371/journal.pone.0240523

Patrick Reipschlager, Tamara Flemisch, Raimund Dachselt
Personal Augmented Reality for Information Visualization on Large Interactive Displays
IEEE Transactions on Visualization and Computer Graphics, vol. 27, no. 2, pp. 1182–1192 (Oct 14, 2020)
DOI: 10.1109/TVCG.2020.3030460

Jonas Neipel, Jonathan Bauermann, Stefano Bo, Tyler Harmon, Frank Jülicher
Power-law population heterogeneity governs epidemic waves
PLoS ONE 15(10):e0239678 (Oct 14, 2020)
DOI: 10.1371/journal.pone.0239678

Sarita Hebbar, Kai Schuhmann, Andrej Shevchenko, Elisabeth Knust
Hydroxylated sphingolipid biosynthesis regulates photoreceptor apical domain morphogenesis
Journal of Cell Biology 219(12) (Oct 13, 2020)
DOI: 10.1083/jcb.201911100

Akram Imam, Eva C. Winnebeck, Nina Buchholz, Philippe Froguel, Amélie Bonnefond, Michele Solimena, Anna Ivanova, Michel Bouvier, Bianca Plouffe, Guillaume Charpentier, Angeliki Karamitri, Ralf Jockers, Till Roenneberg, Céline Vetter
Circadian, Sleep and Caloric Intake Phenotyping in Type 2 Diabetes Patients With Rare Melatonin Receptor 2 Mutations and Controls: A Pilot Study
Front. Physiol. 11 (Oct 9, 2020)
DOI: 10.3389/fphys.2020.564140

Chaoyi Song, Ji Luan, Ruijuan Li, Chanjuan Jiang, Yu Hou, Qingwen Cui, Tianqi Cui, Long Tan, Zaichao Ma, Ya-Jie Tang, A Francis Stewart, Jun Fu, Youming Zhang, Hailong Wang
RedEx: a method for seamless DNA insertion and deletion in large multimodular polyketide synthase gene clusters
Nucleic Acids Research 48(22):e130–e130 (Oct 8, 2020)
DOI: 10.1093/nar/gkaa956

David Gross, Stefan Gumhold
Advanced Rendering of Line Data with Ambient Occlusion and Transparency
IEEE Trans. Visual. Comput. Graphics 27(2):614–624 (Oct 7, 2020)
DOI: 10.1109/tvcg.2020.3028954

Jeong-Mo Choi, Anthony A. Hyman, Rohit V. Pappu
Generalized models for bond percolation transitions of associative polymers
Phys. Rev. E 102(4), 042403 (Oct 6, 2020)
DOI: 10.1103/physreve.102.042403

Giulia Serafini, Giorgia Giordani, Luca Grillini, Davide Andrenacci, Giuseppe Gargiulo, Valeria Cavaliere
The Impact of Drosophila Awd/NME1/2 Levels on Notch and Wg Signaling Pathways
IJMS 21(19):7257 (Oct 1, 2020)
DOI: 10.3390/ijms21197257

Dominic Eberle, Georgia Fodelianaki, Thomas Kurth, Anna Jagielska, Stephanie Möllmert, Elke Ulbricht, Katrin Wagner, Anna V. Taubenberger, Nicole Träber, Joan-Carles Escolano, Krystyn J. Van Vliet, Jochen Guck
Acquired demyelination but not genetic developmental defects in myelination leads to brain tissue stiffness changes
Brain Multiphysics 1:100019 (Sep 30, 2020)
DOI: 10.1016/j.brain.2020.100019

Petra Kiesel, Gonzalo Alvarez Viar, Nikolai Tsoy, Riccardo Maraspini, Peter Gorilak, Vladimir Varga, Alf Honigmann, Gaia Pigino
The molecular structure of mammalian primary cilia revealed by cryo-electron tomography
Nat Struct Mol Biol 27(12):1115–1124 (Sep 28, 2020)
DOI: 10.1038/s41594-020-0507-4

Kathleen R Bashant, Angel M Aponte, Davide Randazzo, Paniz Rezvan Sangsari, Alexander JT Wood, Jack A Bibby, Erin E West, Arlette Vassallo, Zerai G Manna, Martin P Playford, Natasha Jordan, Sarfaraz Hasni, Marjan Gucek, Claudia Kemper, Andrew Conway Morris, Nicole Y Morgan, Nicole Toepfner, Jochen Guck, Nehal N Mehta, Edwin R Chilvers, Charlotte Summers, Mariana J Kaplan
Proteomic, biomechanical and functional analyses define neutrophil heterogeneity in systemic lupus erythematosus
Ann Rheum Dis 80(2):209–218 (Sep 28, 2020)
DOI: 10.1136/annrheumdis-2020-218338

Shinichi Morishita, Kazuki Ichikawa, Eugene W Myers
Finding long tandem repeats in long noisy reads
Bioinformatics 37(5):612–621 (Sep 23, 2020)
DOI: 10.1093/bioinformatics/btaa865

Marco Stazi, Samuele Negro, Aram Megighian, Giorgia D'Este, Michele Solimena, Ralf Jockers, Florigio Lista, Cesare Montecucco, Michela Rigoni
Melatonin promotes regeneration of injured motor axons via MT1 receptors
Journal of Pineal Research 70(1) (Sep 17, 2020)
DOI: 10.1111/jpi.12695

Kamran Hosseini, Leon Sbosny, Ina Poser, Elisabeth Fischer-Friedrich
Binding Dynamics of α-Actinin-4 in Dependence of Actin Cortex Tension
Biophys J., 119(6):1091–1107 (Sep 15, 2020)
DOI: 10.1016/j.bpj.2020.07.031

Lorenzo Duso, Christoph Zechner
Stochastic reaction networks in dynamic compartment populations
Proc Natl Acad Sci U S A 117(37):22674–22683 (Sep 15, 2020)
DOI: 10.1073/pnas.2003734117

Frank Tetzel, Wolfgang Lehner, Romans Kasperovics
Efficient Compilation of Regular Path Queries
Datenbank Spektrum 20(3):243–259 (Sep 10, 2020)
DOI: 10.1007/s13222-020-00353-9

Nicolette G. Moreau, Nicolas Martin, Pierangelo Gobbo, T.-Y. Dora Tang, Stephen Mann
Spontaneous membrane-less multi-compartmentalization via aqueous two-phase separation in complex coacervate micro-droplets
Chem. Commun. 56(84):12717–12720 (Sep 10, 2020)
DOI: 10.1039/d0cc05399f

Damla Kaptan, Sider Penkov, Xingyu Zhang, Vamshidhar R. Gade, Bharath Kumar Raghuraman, Roberta Galli, Júlio L. Sampaio, Robert Haase, Edmund Koch, Andrej Shevchenko, Vasily Zaburdaev, Teymuras V. Kurzchalia
Exogenous ethanol induces a metabolic switch that prolongs the survival of Caenorhabditis elegans dauer larva and enhances its resistance to desiccation
Aging Cell 19(10) (Sep 10, 2020)
DOI: 10.1111/acel.13214

Ilia Zhernov, Stefan Diez, Marcus Braun, Zdenek Lansky
Intrinsically Disordered Domain of Kinesin-3 Kif14 Enables Unique Functional Diversity
Current Biology 30, 1–10 (Sep 7, 2020)
DOI: 10.1016/j.cub.2020.06.039

Jovana Vasiljević, Juha M. Torkko, Klaus-Peter Knoch, Michele Solimena
The making of insulin in health and disease
Diabetologia 63(10):1981–1989 (Sep 7, 2020)
DOI: 10.1007/s00125-020-05192-7

Ingo Nitschke, Sebastian Reuther, Axel Voigt
Liquid crystals on deformable surfaces
Proc. R. Soc. A.47620200313 (Sep 2, 2020)
DOI: 10.1098/rspa.2020.0313

Azaam Aziz, Stefano Pane, Veronica Iacovacci, Nektarios Koukourakis, Jürgen Czarske, Arianna Menciassi, Mariana Medina-Sánchez, and Oliver G. Schmidt
Medical Imaging of Microrobots: Toward In Vivo Applications
CS Nano 2020, 14, 9, 10865–10893 (Sep 1, 2020)
DOI: 10.1021/acsnano.0c05530

Lucas Schirmer, Chloé Hoornaert, Debbie Le Blon, Dimitri Eigel, Catia Neto, Mark Gumbleton, Petra B. Welzel, Anne E. Rosser, Carsten Werner, Peter Ponsaerts, Ben Newland
Heparin-based, injectable microcarriers for controlled delivery of interleukin-13 to the brain
Biomater. Sci. 8(18):4997–5004 (Sep 1, 2020)
DOI: 10.1039/d0bm01249a

Priscilla Turelli, Christopher Playfoot, Dephine Grun, Charlène Raclot, Julien Pontis, Alexandre Coudray, Christian Thorball, Julien Duc, Eugenia V. Pankevich, Bart Deplancke, Volker Busskamp, Didier Trono
Primate-restricted KRAB zinc finger proteins and target retrotransposons control gene expression in human neurons
Sci. Adv. 6(35) (Aug 28, 2020)
DOI: 10.1126/sciadv.aba3200

Christoph Heintze, Petr Formanek, Darius Pohl, Jannes Hauptstein, Bernd Rellinghaus, Nils Kröger
An intimate view into the silica deposition vesicles of diatoms
BMC Mat 2(1), 11 (Aug 27, 2020)
DOI: 10.1186/s42833-020-00017-8

Kayvan Forouhesh Tehrani, Nektarios Koukourakis, Jürgen Czarske, Luke J Mortensen
In situ measurement of the isoplanatic patch for imaging through intact bone
J. Biophotonics. Accepted Author Manuscript. (Aug 25, 2020)
DOI: 10.1002/jbio.202000160

Martin Wustmann, Nicole Poulsen, Nils Kröger, Karl-Heinz van Pée
Chitin synthase localization in the diatom Thalassiosira pseudonana
BMC Mat 2(1), 10 (Aug 25, 2020)
DOI: 10.1186/s42833-020-00016-9

Majed Alghamdi, Filippo Chierchini, Dimitri Eigel, Christian Taplan, Thomas Miles, Dagmar Pette, Petra B. Welzel, Carsten Werner, Wenxin Wang, Catia Neto, Mark Gumbleton, Ben Newland
Poly(ethylene glycol) based nanotubes for tuneable drug delivery to glioblastoma multiforme
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Elias Scharf, Robert Kuschmierz, Jürgen W. Czarske
Needle-size lensless fiber endoscope for optical stretching and 3D imaging with cellular resolution (Conference Presentation)
Biomedical Spectroscopy, Microscopy, and Imaging (Apr 1, 2020)
DOI: 10.1117/12.2553679

Sebastian Junge, Felix Schmieder, Philipp Sasse, Jürgen W. Czarske, Maria Leilani Torres-Mapa, Alexander Heisterkamp
Holographic optogenetic stimulation with calcium imaging as an all-optical tool for cardiac electrophysiological studies (Conference Presentation)
Biomedical Spectroscopy, Microscopy, and Imaging (Apr 1, 2020)
DOI: 10.1117/12.2554011

Benedikt Krug, Nektarios Koukourakis, Jürgen W. Czarske
Fast measurement of mechanical properties with impulsive stimulated Brillouin microscopy (Conference Presentation)
Biomedical Spectroscopy, Microscopy, and Imaging (Apr 1, 2020)
DOI: 10.1117/12.2555358

Gunar Fabig, Robert Kiewisz, Norbert Lindow, James A Powers, Vanessa Cota, Luis J Quintanilla, Jan Brugués, Steffen Prohaska, Diana S Chu, Thomas Müller-Reichert
Male meiotic spindle features that efficiently segregate paired and lagging chromosomes
eLife 9:e50988. (Apr 1, 2020)
DOI: 10.7554/eLife.50988

Wenjie Wang, Nektarios Koukourakis, Jürgen W. Czarske
Piezo-actuated adaptive elements in scanning microscopy (Conference Presentation)
Unconventional Optical Imaging II (Mar 30, 2020)
DOI: 10.1117/12.2555383

Theresa Suckert, Johannes Müller, Elke Beyreuther, Behnam Azadegan, Anja Brüggemann, Rebecca Bütof, Antje Dietrich, Malte Gotz, Robert Haase, Michael Schürer, Falk Tillner, Cläre von Neubeck, Mechthild Krause, Armin Lühr
High-precision image-guided proton irradiation of mouse brain sub-volumes
Radiotherapy and Oncology 146:205–212 (Mar 26, 2020)
DOI: 10.1016/j.radonc.2020.02.023

Milena Schuhmacher, Andreas T. Grasskamp, Pavel Barahtjan, Nicolai Wagner, Benoit Lombardot, Jan S. Schuhmacher, Pia Sala, Annett Lohmann, Ian Henry, Andrej Shevchenko, Ünal Coskun, Alexander M. Walter, André Nadler
Live-cell lipid biochemistry reveals a role of diacylglycerol side-chain composition for cellular lipid dynamics and protein affinities
Proc. Natl. Acad. Sci. U.S.A. 117(14):7729–7738 (Mar 26, 2020)
DOI: 10.1073/pnas.1912684117

Ruslan Rust, Tunahan Kirabali, Lisa Grönnert, Berre Dogancay, Yanuar D. P. Limasale, Andrea Meinhardt, Carsten Werner, Bàrbara Laviña, Luka Kulic, Roger M. Nitsch, Christian Tackenberg, Martin E. Schwab
A Practical Guide to the Automated Analysis of Vascular Growth, Maturation and Injury in the Brain
Front. Neurosci. 14 (Mar 20, 2020)
DOI: 10.3389/fnins.2020.00244

Sider Penkov, Bharath Kumar Raghuraman, Cihan Erkut, Jana Oertel, Roberta Galli, Eduardo Jacobo Miranda Ackerman, Daniela Vorkel, Jean-Marc Verbavatz, Edmund Koch, Karim Fahmy, Andrej Shevchenko, Teymuras V. Kurzchalia
A metabolic switch regulates the transition between growth and diapause in C. elegans
BMC Biol 18(1), 31 (Mar 18, 2020)
DOI: 10.1186/s12915-020-0760-3

Justus A. Kromer, Noelia de la Cruz, Benjamin M. Friedrich
Chemokinetic Scattering, Trapping, and Avoidance of Active Brownian Particles
Phys. Rev. Lett. 124, 118101 (Mar 17, 2020)
DOI: 10.1103/PhysRevLett.124.118101

Hannes Radner, Johannes Stange, Lars Buttner, Jurgen Czarske
Field-Programmable System-on-Chip-Based Control System for Real-Time Distortion Correction in Optical Imaging
IEEE Trans. Ind. Electron. 68(4):3370–3379 (Mar 17, 2020)
DOI: 10.1109/tie.2020.2979557

David T. Gonzales, T-Y Dora Tang, Christoph Zechner
Moment-based analysis of biochemical networks in a heterogeneous population of communicating cells
2019 IEEE 58th Conference on Decision and Control (CDC) (Mar 13, 2020)
DOI: 10.1109/cdc40024.2019.9029457

Elias Scharf, Robert Kuschmierz, Jürgen Czarske
Robust 4D wavefront control through coherent fiber bundles for lensless endoscopy and optical tweezing (Conference Presentation)
Adaptive Optics and Wavefront Control for Biological Systems VI (Mar 11, 2020)
DOI: 10.1117/12.2543213

Andrea Bertoncini, Gheorghe Cojoc, Jochen Guck, Carlo Liberale
High-throughput fabrication of right-angle prism mirrors with selective metalization by two-step 3D printing and computer vision alignment
Advanced Fabrication Technologies for Micro/Nano Optics and Photonics XIII (Feb 28, 2020)
DOI: 10.1117/12.2544147

Nora Molkenthin, Steffen Mühle, Antonia S. J. S. Mey, Marc Timme
Self-organized emergence of folded protein-like network structures from geometric constraints
PLoS ONE 15(2): e0229230 (Feb 27, 2020)
DOI: 10.1371/journal.pone.0229230

Ritika Giri, Dimitrios K Papadopoulos, Diana M Posadas, Hemanth K Potluri, Pavel Tomancak, Madhav Mani, Richard W Carthew
Ordered patterning of the sensory system is susceptible to stochastic features of gene expression
eLife 9 (Feb 26, 2020)
DOI: 10.7554/elife.53638

Haifeng Xu, Mariana Medina-Sánchez, Manfred F. Maitz, Carsten Werner, Oliver G. Schmidt
Sperm Micromotors for Cargo Delivery through Flowing Blood
ACS Nano 14(3):2982–2993 (Feb 25, 2020)
DOI: 10.1021/acsnano.9b07851

Katerina Deike-Hofmann, Julia Reuter, Robert Haase, Tristan Kuder, Daniel Paech, Sebastian Bickelhaupt, Michael Forsting, Heinz-Peter Schlemmer, Claus Peter Heußel, Alexander Radbruch
No Changes in T1 Relaxometry After a Mean of 11 Administrations of Gadobutrol
Invest Radiol 55(6):381–386 (Feb 25, 2020)
DOI: 10.1097/rli.0000000000000650

Johannes Luong, Dirk Habich, Wolfgang Lehner
A Technical Perspective of DataCalc — Ad-hoc Analyses on Heterogeneous Data Sources
2019 IEEE International Conference on Big Data (Big Data) (Feb 25, 2020)
DOI: 10.1109/bigdata47090.2019.9006029

Maik Herbig, Ahmad Ahsan Nawaz, Marta Urbanska, Martin Nötzel, Martin Kräter, Philipp Rosendahl, Christoph Herold, Nicole Töpfner, Marketa Kubankova, Ruchi Goswami, Shada Abuhattum, Felix Reichel, Paul Müller, Anna Taubenberger, Salvatore Girardo, Angela Jacobi, Jochen R. Guck
Image-based cell sorting using artificial intelligence
High-Speed Biomedical Imaging and Spectroscopy V (Feb 20, 2020)
DOI: 10.1117/12.2544809

Alexander Krull, Tomáš Vičar, Mangal Prakash, Manan Lalit, Florian Jug
Probabilistic Noise2Void: Unsupervised Content-Aware Denoising
Front. Comput. Sci. 2 (Feb 19, 2020)
DOI: 10.3389/fcomp.2020.00005

Giovanni Pasquini, Virginia Cora, Anka Swiersy, Kevin Achberger, Lena Antkowiak, Brigitte Müller, Tobias Wimmer, Sabine Anne-Kristin Fraschka, Nicolas Casadei, Marius Ueffing, Stefan Liebau, Knut Stieger, Volker Busskamp
Using Transcriptomic Analysis to Assess Double-Strand Break Repair Activity: Towards Precise in Vivo Genome Editing
IJMS 21(4):1380 (Feb 19, 2020)
DOI: 10.3390/ijms21041380

Stefan Rothe, Qian Zhang, Nektarios Koukourakis, Jürgen W. Czarske
Deep Learning for Computational Mode Decomposition in Optical Fibers
Applied Sciences 10(4):1367 (Feb 18, 2020)
DOI: 10.3390/app10041367

Georg Krainer, Mathias Schenkel, Andreas Hartmann, Dorna Ravamehr-Lake, Charles M. Deber, Michael Schlierf
CFTR transmembrane segments are impaired in their conformational adaptability by a pathogenic loop mutation and dynamically stabilized by Lumacaftor
J. Biol. Chem. 295:1985–1991 (Feb 14, 2020)
DOI: 10.1074/jbc.AC119.011360

Matthäus Mittasch, Vanna M. Tran, Manolo U. Rios, Anatol W. Fritsch, Stephen J. Enos, Beatriz Ferreira Gomes, Alec Bond, Moritz Kreysing, Jeffrey B. Woodruff
Regulated changes in material properties underlie centrosome disassembly during mitotic exit
Journal of Cell Biology 219(4) (Feb 12, 2020)
DOI: 10.1083/jcb.201912036

Sona Valuchova, Pavlina Mikulkova, Jana Pecinkova, Jana Klimova, Michal Krumnikl, Petr Bainar, Stefan Heckmann, Pavel Tomancak, Karel Riha
Imaging plant germline differentiation within Arabidopsis flowers by light sheet microscopy
eLife 9 (Feb 11, 2020)
DOI: 10.7554/elife.52546

Rouhollah Habibey, Kritika Sharma, Anka Swiersy, Volker Busskamp
Optogenetics for neural transplant manipulation and functional analysis
Biochemical and Biophysical Research Communications 527(2):343–349 (Feb 6, 2020)
DOI: 10.1016/j.bbrc.2020.01.141

Helen K. Matthews, Sushila Ganguli, Katarzyna Plak, Anna V. Taubenberger, Zaw Win, Max Williamson, Matthieu Piel, Jochen Guck, Buzz Baum
Oncogenic Signaling Alters Cell Shape and Mechanics to Facilitate Cell Division under Confinement
Developmental Cell 52(5):563–573.e3 (Feb 6, 2020)
DOI: 10.1016/j.devcel.2020.01.004

Elvis Koci, Maik Thiele, Oscar Romero, Wolfgang Lehner
A Genetic-Based Search for Adaptive Table Recognition in Spreadsheets
2019 International Conference on Document Analysis and Recognition (ICDAR) (Feb 4, 2020)
DOI: 10.1109/icdar.2019.00206

Elvis Koci, Maik Thiele, Josephine Rehak, Oscar Romero, Wolfgang Lehner
DECO: A Dataset of Annotated Spreadsheets for Layout and Table Recognition
2019 International Conference on Document Analysis and Recognition (ICDAR) (Feb 4, 2020)
DOI: 10.1109/icdar.2019.00207

Satu Kujawski, Cátia Crespo, Marta Luz, Michaela Yuan, Sylke Winkler, Elisabeth Knust
Loss of Crb2b-lf leads to anterior segment defects in old zebrafish
Biology Open (Jan 27, 2020)
DOI: 10.1242/bio.047555

Adam Klosin, Florian Oltsch, Tyler Harmon, Alf Honigmann, Frank Jülicher, Anthony Hyman, Christoph Zechner
Phase separation provides a mechanism to reduce noise in cells
Science 367(6476):464–468. (Jan 24, 2020)
DOI: 10.1126/science.aav6691

Ben Newland, Fanny Ehret, Franziska Hoppe, Dimitri Eigel, Dagmar Pette, Heike Newland, Petra B. Welzel, Gerd Kempermann, Carsten Werner
Static and dynamic 3D culture of neural precursor cells on macroporous cryogel microcarriers
MethodsX 7:100805 (Jan 24, 2020)
DOI: 10.1016/j.mex.2020.100805

Hao Zhang, Damian Anders, Michael Löser, Steffen Ihlenfeldt, Jürgen Czarske, Robert Kuschmierz
Non-contact, bi-directional tool tip vibration measurement in CNC milling machines with a single optical sensor
Mechanical Systems and Signal Processing 139:106647 (Jan 24, 2020)
DOI: 10.1016/j.ymssp.2020.106647

Shengyu Shi, Robert Kuschmierz, Guizhen Zhang, Jing Lin, Jürgen Czarske, Jinping Qu
Modeling, quantification, and mitigation of uncertainty propagation in two-step roundness measurements
Measurement 155:107530 (Jan 23, 2020)
DOI: 10.1016/j.measurement.2020.107530

Martin Pippel, David Jebb, Franziska Patzold, Sylke Winkler, Heiko Vogel, Gene Myers, Michael Hiller, Anna K Hundsdoerfer
A highly contiguous genome assembly of the bat hawkmoth Hyles vespertilio (Lepidoptera: Sphingidae)
GigaScience 9(1) (Jan 23, 2020)
DOI: 10.1093/gigascience/giaa001

Celina Love, Jan Steinkühler, David T. Gonzales, Naresh Yandrapalli, Tom Robinson, Rumiana Dimova, T.‐Y. Dora Tang
Reversible pH‐Responsive Coacervate Formation in Lipid Vesicles Activates Dormant Enzymatic Reactions
Angew Chem Int Ed 59(15):5950–5957 (Jan 14, 2020)
DOI: 10.1002/anie.201914893

Alexander Krull, Tim-Oliver Buchholz, Florian Jug
Noise2Void - Learning Denoising From Single Noisy Images
2019 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) (Jan 10, 2020)
DOI: 10.1109/cvpr.2019.00223

Kathleen R Bashant, Nicole Toepfner, Christopher J Day, Nehal N Mehta, Mariana J Kaplan, Charlotte Summers, Jochen Guck, Edwin R Chilvers
The mechanics of myeloid cells
Biology of the Cell 112(4):103–112 (Jan 9, 2020)
DOI: 10.1111/boc.201900084

Samuel J. Bose, Georg Krainer, Demi R.S. Ng, Mathias Schenkel, Hideki Shishido, Jae Seok Yoon, Peter M. Haggie, Michael Schlierf, David N. Sheppard, William R. Skach
Towards next generation therapies for cystic fibrosis: Folding, function and pharmacology of CFTR
Journal of Cystic Fibrosis 19:S25–S32 (Jan 3, 2020)
DOI: 10.1016/j.jcf.2019.12.009

Hiroki R. Ueda, Ali Ertürk, Kwanghun Chung, Viviana Gradinaru, Alain Chédotal, Pavel Tomancak, Philipp J. Keller
Tissue clearing and its applications in neuroscience
Nat Rev Neurosci 21(2):61–79 (Jan 2, 2020)
DOI: 10.1038/s41583-019-0250-1

Wenjie Wang, Katrin Philipp, Nektarios Koukourakis, Jürgen W. Czarske
Real-time monitoring of adaptive lenses with high tuning range and multiple degrees of freedom
Opt. Lett. 45(2):272 (Jan 2, 2020)
DOI: 10.1364/ol.45.000272

2019

219 publication(s) listed

A. Gong, S. Rode, U. B. Kaupp, G. Gompper, J. Elgeti, B. M. Friedrich, L. Alvarez
The steering gaits of sperm
Phil. Trans. R. Soc. B 375(1792):20190149 (Dec 30, 2019)
DOI: 10.1098/rstb.2019.0149

Richard Nauber, Lars Buttner, Jurgen Czarske
Ultrasound Imaging in Hot Melts with Time Reversal Virtual Arrays
2019 IEEE International Ultrasonics Symposium (IUS) (Dec 27, 2019)
DOI: 10.1109/ultsym.2019.8926053

Takashi Namba, Judit Dóczi, Anneline Pinson, Lei Xing, Nereo Kalebic, Michaela Wilsch-Bräuninger, Katherine R. Long, Samir Vaid, Janelle Lauer, Aliona Bogdanova, Barbara Borgonovo, Anna Shevchenko, Patrick Keller, David Drechsel, Teymuras Kurzchalia, Pauline Wimberger, Christos Chinopoulos, Wieland B. Huttner
Human-Specific ARHGAP11B Acts in Mitochondria to Expand Neocortical Progenitors by Glutaminolysis
Neuron 105(5):867–881.e9 (Dec 26, 2019)
DOI: 10.1016/j.neuron.2019.11.027

Ben Newland, Fanny Ehret, Franziska Hoppe, Dimitri Eigel, Dagmar Pette, Heike Newland, Petra B. Welzel, Gerd Kempermann, Carsten Werner
Macroporous heparin-based microcarriers allow long-term 3D culture and differentiation of neural precursor cells
Biomaterials 230, 119540 (Dec 20, 2019)
DOI: 10.1016/j.biomaterials.2019.119540

Paulo Caldas, Mar López-Pelegrín, Daniel J. G. Pearce, Nazmi Burak Budanur, Jan Brugués, Martin Loose
Cooperative ordering of treadmilling filaments in cytoskeletal networks of FtsZ and its crosslinker ZapA
Nat Commun 10, 5744 (Dec 17, 2019)
DOI: 10.1038/s41467-019-13702-4

Felix Greiffenhagen, Jakob Woisetschläger, Johannes Gürtler, Jürgen Czarske
Quantitative measurement of density fluctuations with a full-field laser interferometric vibrometer
Exp Fluids 61(1), 9 (Dec 16, 2019)
DOI: 10.1007/s00348-019-2842-y

Kaushikaram Subramanian, Martin Weigert, Oliver Borsch, Heike Petzold, Alfonso Garcia-Ulloa, Eugene W Myers, Marius Ader, Irina Solovei, Moritz Kreysing
Rod nuclear architecture determines contrast transmission of the retina and behavioral sensitivity in mice
eLife 2019;8:e49542 (Dec 11, 2019)
DOI: 10.7554/eLife.49542

Florian Bürkle, Florine Moyon, Lukas Feierabend, Jens Wartmann, Angelika Heinzel, Jürgen Czarske, Lars Büttner
Investigation and equalisation of the flow distribution in a fuel cell stack
Journal of Power Sources 448:227546 (Dec 10, 2019)
DOI: 10.1016/j.jpowsour.2019.227546

Yachong Guo, Marco Werner, Wenfei Li, Jens-Uwe Sommer, Vladimir A. Baulin
Shape-Adaptive Single-Chain Nanoparticles Interacting with Lipid Membranes
Macromolecules 52(24):9578–9584 (Dec 10, 2019)
DOI: 10.1021/acs.macromol.9b02102

Sarita Hebbar, Elisabeth Knust, Guillaume Thibault, Rachel Susan Kraut
Editorial: Connections to Membrane Trafficking Where You Least Expect Them: Diseases, Dynamics, Diet and Distance
Front. Cell Dev. Biol. 7 (Dec 6, 2019)
DOI: 10.3389/fcell.2019.00327

Daniela Mayer, Michael B Stadler, Melanie Rittirsch, Daniel Hess, Ilya Lukonin, Maria Winzi, Austin Smith, Frank Buchholz, Joerg Betschinger
Zfp281 orchestrates interconversion of pluripotent states by engaging Ehmt1 and Zic2
The EMBO Journal 39(2) (Nov 29, 2019)
DOI: 10.15252/embj.2019102591

Hassan Mziaut, Georg Henniger, Katharina Ganss, Sebastian Hempel, Steffen Wolk, Johanna McChord, Kamal Chowdhury, Philippe Ravassard, Klaus-Peter Knoch, Christian Krautz, Jürgen Weitz, Robert Grützmann, Christian Pilarsky, Michele Solimena, Stephan Kersting
MiR-132 controls pancreatic beta cell proliferation and survival through Pten/Akt/Foxo3 signaling
Molecular Metabolism 31:150–162 (Nov 22, 2019)
DOI: 10.1016/j.molmet.2019.11.012

Rebecca Bütof, Steffen Löck, Maher Soliman, Robert Haase, Rosalind Perrin, Christian Richter, Steffen Appold, Mechthild Krause, Michael Baumann
Dose–volume predictors of early esophageal toxicity in non-small cell lung cancer patients treated with accelerated-hyperfractionated radiotherapy
Radiotherapy and Oncology 143:44–50 (Nov 22, 2019)
DOI: 10.1016/j.radonc.2019.11.002

Antoine Graindorge, Inês Pinheiro, Anna Nawrocka, Allison C. Mallory, Peter Tsvetkov, Noa Gil, Carlo Carolis, Frank Buchholz, Igor Ulitsky, Edith Heard, Mikko Taipale, Alena Shkumatava
In-cell identification and measurement of RNA-protein interactions
Nat Commun 10(1), 5317 (Nov 22, 2019)
DOI: 10.1038/s41467-019-13235-w

Muhammad Idris, Martín Ugarte, Stijn Vansummeren, Hannes Voigt, Wolfgang Lehner
General dynamic Yannakakis: conjunctive queries with theta joins under updates
The VLDB Journal 29(2-3):619–653 (Nov 19, 2019)
DOI: 10.1007/s00778-019-00590-9

N. Träber, K. Uhlmann, S. Girardo, G. Kesavan, K. Wagner, J. Friedrichs, R. Goswami, K. Bai, M. Brand, C. Werner, D. Balzani, J. Guck
Polyacrylamide Bead Sensors for in vivo Quantification of Cell-Scale Stress in Zebrafish Development
Sci Rep 9, 17031 (2019). (Nov 19, 2019)
DOI: 10.1038/s41598-019-53425-6

Cyril Basquin, Dmitry Ershov, Noémie Gaudin, Hanh Thi-Kim Vu, Bruno Louis, Jean-François Papon, Anne-Marie Orfila, Sarah Mansour, Jochen Christian Rink, Juliette Azimzadeh
Emergence of a Bilaterally Symmetric Pattern from Chiral Components in the Planarian Epidermis
Developmental Cell 51(4):516–525.e5 (Nov 18, 2019)
DOI: 10.1016/j.devcel.2019.10.021

Hanh Thi-Kim Vu, Sarah Mansour, Michael Kücken, Corinna Blasse, Cyril Basquin, Juliette Azimzadeh, Eugene Wimberly Myers, Lutz Brusch, Jochen Christian Rink
Dynamic Polarization of the Multiciliated Planarian Epidermis between Body Plan Landmarks
Developmental Cell 51(4):526–542.e6 (Nov 18, 2019)
DOI: 10.1016/j.devcel.2019.10.022

Robert Haase, Loic A. Royer, Peter Steinbach, Deborah Schmidt, Alexandr Dibrov, Uwe Schmidt, Martin Weigert, Nicola Maghelli, Pavel Tomancak, Florian Jug, Eugene W. Myers
CLIJ: GPU-accelerated image processing for everyone
Nat Methods 17(1):5–6 (Nov 18, 2019)
DOI: 10.1038/s41592-019-0650-1

Hauke Drechsler, Yong Xu, Veikko F. Geyer, Yixin Zhang, Stefan Diez
Multivalent electrostatic microtubule-interactions of synthetic peptides are sufficient to mimic advanced MAP-like behaviour
Mol Biol Cell 30(24), 2953–2968 (Nov 14, 2019)
DOI: 10.1091/mbc.E19-05-0247

Ritsuya Niwayama, Prachiti Moghe, Yan-Jun Liu, Dimitri Fabrèges, Frank Buchholz, Matthieu Piel, Takashi Hiiragi
A Tug-of-War between Cell Shape and Polarity Controls Division Orientation to Ensure Robust Patterning in the Mouse Blastocyst
Developmental Cell 51(5):564–574.e6 (Nov 14, 2019)
DOI: 10.1016/j.devcel.2019.10.012

Theresia Gutmann, Ingmar B. Schäfer, Chetan Poojari, Beate Brankatschk, Ilpo Vattulainen, Mike Strauss, Ünal Coskun
Cryo-EM structure of the complete and ligand-saturated insulin receptor ectodomain
Journal of Cell Biology 219(1) (Nov 14, 2019)
DOI: 10.1083/jcb.201907210

Manja Wobus, Anna Mies, Valentina Magno, Cindy Welzel, Susann Winter, Friedrich Stoelzel, Carsten Werner, Martin Bornhaeuser, Uwe Platzbecker
Altered Structure and Function of Mesenchymal Stromal Cell-Derived Extracellular Matrix in MDS Can be Restored By Luspatercept
Blood 134(Supplement_1):1699–1699 (Nov 14, 2019)
DOI: 10.1182/blood-2019-129814

Abhik Basu, Jean-Francois Joanny, Frank Jülicher, Jacques Prost
Casimir stresses in active nematic films
New J. Phys. 21(12):123046 (Nov 11, 2019)
DOI: 10.1088/1367-2630/ab5628

Katrin Wagner, Salvatore Girardo, Ruchi Goswami, Gonzalo Rosso, Elke Ulbricht, Paul Müller, Despina Soteriou, Nicole Träber, Jochen Guck
Colloidal crystals of compliant microgel beads to study cell migration and mechanosensitivity in 3D
Soft Matter 15(47):9776–9787 (Nov 7, 2019)
DOI: 10.1039/c9sm01226e

Johanna Lattner, Weihua Leng, Elisabeth Knust, Marko Brankatschk, David Flores-Benitez
Crumbs organizes the transport machinery by regulating apical levels of PI(4,5)P2 in Drosophila
eLife 8 (Nov 7, 2019)
DOI: 10.7554/elife.50900

Felix Lansing, Maciej Paszkowski-Rogacz, Lukas Theo Schmitt, Paul Martin Schneider, Teresa Rojo Romanos, Jan Sonntag, Frank Buchholz
A heterodimer of evolved designer-recombinases precisely excises a human genomic DNA locus
Nucleic Acids Research 48(1):472–485 (Nov 4, 2019)
DOI: 10.1093/nar/gkz1078

Frank Jülicher
Suzanne Eaton (1959-2019)
Development 146(21) (Nov 4, 2019)
DOI: 10.1242/dev.185538

Oliver Beutel, Riccardo Maraspini, Karina Pombo-García, Cécilie Martin-Lemaitre, Alf Honigmann
Phase Separation of Zonula Occludens Proteins Drives Formation of Tight Junctions
Cell 179(4), 923-936.e11 (Oct 31, 2019)
DOI: 10.1016/j.cell.2019.10.011

Alexander Mietke, V. Jemseena, K. Vijay Kumar, Ivo F. Sbalzarini, Frank Jülicher
Minimal model of cellular symmetry breaking
Phys. Rev. Lett. 123, 188101 (Oct 28, 2019)
DOI: 10.1103/PhysRevLett.123.188101

Alexis R. Barr, Jörg Mansfeld
FEBS Letters Special Issue: Cell Cycle Control
FEBS Letters 593(20):2803–2804 (Oct 28, 2019)
DOI: 10.1002/1873-3468.13638

Ralf Zimmermann, Jérôme F.L. Duval, Carsten Werner
On the analysis of ionic surface conduction to unravel charging processes at macroscopic soft and hard solid–liquid interfaces
Current Opinion in Colloid & Interface Science 44:177–187 (Oct 28, 2019)
DOI: 10.1016/j.cocis.2019.10.004

Yan Ge, Philipp Rosendahl, Claudio Duran, Nicole Topfner, Sara Ciucci, Jochen Guck, Carlo Vittorio Cannistraci
Cell Mechanics Based Computational Classification of Red Blood Cells Via Machine Intelligence Applied to Morpho-Rheological Markers
IEEE/ACM Trans. Comput. Biol. and Bioinf. 18(4):1405–1415 (Oct 28, 2019)
DOI: 10.1109/tcbb.2019.2945762

Dejan Husman, Petra B. Welzel, Steffen Vogler, Laura J. Bray, Nicole Träber, Jens Friedrichs, Vincent Körber, Mikhail V. Tsurkan, Uwe Freudenberg, Julian Thiele, Carsten Werner
Multiphasicmicrogel-in-gelmaterials to recapitulate cellular mesoenvironmentsin vitro
Biomater. Sci. 8(1):101–108 (Oct 25, 2019)
DOI: 10.1039/c9bm01009b

Kayvan Forouhesh Tehrani, Nektarios Koukourakis, Jürgen Czarske, Luke Mortensen
Characterization of memory effect in juvenile mouse skull for imaging through intact bone
Biophotonics Congress: Optics in the Life Sciences Congress 2019 (BODA,BRAIN,NTM,OMA,OMP) (Oct 24, 2019)
DOI: 10.1364/boda.2019.jt4a.27

Nektarios Koukourakis, Jürgen Czarske
Adaptive hybrid illumination microscopy for Zebrafish screening
Biophotonics Congress: Optics in the Life Sciences Congress 2019 (BODA,BRAIN,NTM,OMA,OMP) (Oct 24, 2019)
DOI: 10.1364/ntm.2019.nt3c.2

Markian Pryshliak, Ahmet Hazini, Klaus Knoch, Babette Dieringer, Beatrice Tolksdorf, Michele Solimena, Jens Kurreck, Sandra Pinkert, Henry Fechner
MiR‐375‐mediated suppression of engineered coxsackievirus B3 in pancreatic cells
FEBS Letters 594(4):763–775 (Oct 23, 2019)
DOI: 10.1002/1873-3468.13647

Lucas Schirmer, Karolina Chwalek, Mikhail V. Tsurkan, Uwe Freudenberg, Carsten Werner
Glycosaminoglycan-based hydrogels with programmable host reactions
Biomaterials 228:119557 (Oct 23, 2019)
DOI: 10.1016/j.biomaterials.2019.119557

Nusrat Jahan Lisa, Tuan Duy Anh Nguyen, Dirk Habich, Akash Kumar, Wolfgang Lehner
High-Throughput BitPacking Compression
2019 22nd Euromicro Conference on Digital System Design (DSD) (Oct 22, 2019)
DOI: 10.1109/dsd.2019.00101

Azaam Aziz, Mariana Medina-Sánchez*, Nektarios Koukourakis, Jiawei Wang, Robert Kuschmierz, Hannes Radner, Jürgen W. Czarske, Oliver G. Schmidt*
Real-Time IR Tracking of Single Reflective Micromotors through Scattering Tissues
Adv Funct Mater, 1905272 (Oct 21, 2019)
* corresponding authors
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Aryaman Gupta, Ulrik Günther, Pietro Incardona, Ata Deniz Aydin, Raimund Dachselt, Stefan Gumhold, Ivo F. Sbalzarini
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Mirna Bilus, Maja Semanjski, Marko Mocibob, Igor Zivkovic, Nevena Cvetesic, Dan S. Tawfik, Agnes Toth-Petroczy, Boris Macek, Ita Gruic-Sovulj
On the Mechanism and Origin of Isoleucyl-tRNA Synthetase Editing against Norvaline
Journal of Molecular Biology 431(6):1284–1297 (Feb 1, 2019)
DOI: 10.1016/j.jmb.2019.01.029

Michal Grzybek, Alessandra Palladini, Vasileia I. Alexaki, Michal A. Surma, Kai Simons, Triantafyllos Chavakis, Christian Klose, Ünal Coskun
Comprehensive and quantitative analysis of white and brown adipose tissue by shotgun lipidomics
Molecular Metabolism 22:12–20 (Jan 30, 2019)
DOI: 10.1016/j.molmet.2019.01.009

Michael Schlierf, Ganggang Wang, Xiaojiang S Chen, Taekjip Ha
Hexameric helicase G40P unwinds DNA in single base pair steps
eLife 8 (Jan 28, 2019)
DOI: 10.7554/elife.42001

Martin Hartrumpf, Ralf-Uwe Kuehnel, Filip Schroeter, Robert Haase, Magdalena L. Laux, Roya Ostovar, Johannes M. Albes
Clinical Short-Term Outcome and Hemodynamic Comparison of Six Contemporary Bovine Aortic Valve Prostheses
Thorac Cardiovasc Surg 68(07):557–566 (Jan 23, 2019)
DOI: 10.1055/s-0038-1676853

Martin Hahmann, Claudio Hartmann, Lars Kegel, Wolfgang Lehner
Large-Scale Time Series Analytics
Datenbank Spektrum 19(1):17–29 (Jan 21, 2019)
DOI: 10.1007/s13222-018-00304-5

Kassiani Skouloudaki, Dimitrios K. Papadopoulos, Pavel Tomancak, Elisabeth Knust
The apical protein Apnoia interacts with Crumbs to regulate tracheal growth and inflation
PLoS Genet 15(1):e1007852 (Jan 15, 2019)
DOI: 10.1371/journal.pgen.1007852

Dimitrios K. Papadopoulos, Kassiani Skouloudaki, Ylva Engström, Lars Terenius, Rudolf Rigler, Christoph Zechner, Vladana Vukojević, Pavel Tomancak
Control of Hox transcription factor concentration and cell-to-cell variability by an auto-regulatory switch
Development 146(12) (Jan 14, 2019)
DOI: 10.1242/dev.168179

Felix Greiffenhagen, Johannes Peterleithner, Jakob Woisetschläger, Andreas Fischer, Johannes Gürtler, Jürgen Czarske
Discussion of laser interferometric vibrometry for the determination of heat release fluctuations in an unconfined swirl-stabilized flame
Combustion and Flame 201:315–327 (Jan 11, 2019)
DOI: 10.1016/j.combustflame.2018.12.019

Giorgio Fracasso, Yvonne Körner, David Thomas T Gonzales, T-Y. Dora Tang
In vitro gene expression and detergent-free reconstitution of active proteorhodopsin in lipid vesicles
Exp Biol Med (Maywood) 244(4):314–322 (Jan 11, 2019)
DOI: 10.1177/1535370218820290

Christian Kupsch, David Weik, Lukas Feierabend, Richard Nauber, Lars Buttner, Jurgen Czarske
Vector Flow Imaging of a Highly Laden Suspension in a Zinc-Air Flow Battery Model
IEEE Trans. Ultrason., Ferroelect., Freq. Contr. 66(4):761–771 (Jan 10, 2019)
DOI: 10.1109/tuffc.2019.2891514

Stefan Rothe, Hannes Radner, Nektarios Koukourakis, Jürgen W. Czarske
Transmission Matrix Measurement of Multimode Optical Fibers by Mode-Selective Excitation Using One Spatial Light Modulator
Applied Sciences 9(1):195 (Jan 9, 2019)
DOI: 10.3390/app9010195

Titus M. Franzmann, Simon Alberti
Protein Phase Separation as a Stress Survival Strategy
Cold Spring Harb Perspect Biol 11(6):a034058 (Jan 7, 2019)
DOI: 10.1101/cshperspect.a034058

Albert Thommen, Steffen Werner, Olga Frank, Jenny Philipp, Oskar Knittelfelder, Yihui Quek, Karim Fahmy, Andrej Shevchenko, Benjamin M Friedrich, Frank Jülicher, Jochen C Rink
Body size-dependent energy storage causes Kleiber’s law scaling of the metabolic rate in planarians
eLife 8:e38187 (Jan 4, 2019)
DOI: 10.7554/eLife.38187

Claudio Hartmann, Franziska Ressel, Martin Hahmann, Dirk Habich, Wolfgang Lehner
CSAR: the cross-sectional autoregression model for short and long-range forecasting
Int J Data Sci Anal 8(2):165–181 (Jan 3, 2019)
DOI: 10.1007/s41060-018-00169-7

2018

2 publication(s) listed

Louise M. Jawerth, Mahdiye Ijavi, Martine Ruer, Shambaditya Saha, Marcus Jahnel, Anthony A. Hyman, Frank Jülicher, Elisabeth Fischer-Friedrich
Salt-Dependent Rheology and Surface Tension of Protein Condensates Using Optical Traps
Phys. Rev. Lett. 121, 258101 (Dec 18, 2018)
DOI: 10.1103/PhysRevLett.121.258101

Ralf Zimmermann, Judith Delius, Jens Friedrichs, Susanne Stehl, Thomas Hofmann, Christian Hannig, Melanie Rehage, Carsten Werner, Matthias Hannig
Impact of oral astringent stimuli on surface charge and morphology of the protein-rich pellicle at the tooth–saliva interphase
Colloids and Surfaces B: Biointerfaces 174:451–458 (Nov 16, 2018)
DOI: 10.1016/j.colsurfb.2018.11.028