Publications

Tina Subic, Ivo F. Sbalzarini
A Gaussian jump process formulation of the reaction–diffusion master equation enables faster exact stochastic simulations
J. Chem. Phys. 157, 194110 doi: 10.1063/5.0123073 (17 November 2022)

Frank Jülicher, Jacques Prost, John Toner
Broken Living Layers: Dislocations in Active Smectic Liquid Crystals
Phys. Rev. E 106, 054607 doi: 10.1103/PhysRevE.106.054607 (15 November 2022)

Jingyuan Zhu, Aseem Salhotra, Christoph Robert Meinecke, Pradheebha Surendiran, Roman Lyttleton, Danny Reuter, Hillel Kugler, Stefan Diez, Alf Månsson, Heiner Linke, Till Korten
Solving the 3-SAT problem using network-based biocomputation
Adv. Intell. Syst. 2200202 doi: 10.1002/aisy.202200202 (26 October 2022)

Anna Svirina, Neharika Chamachi, Michael Schlierf
Single-molecule approaches reveal outer membrane protein biogenesis dynamics
BioEssays, 00, e2200149 doi: 10.1002/bies.202200149 (25 October 2022)

Mathias Schenkel, Dorna Ravamehr-Lake, Tomasz Czerniak, James P.Saenz, Georg Krainer, Michael Schlierf, Charles M. Deber
Impact of cholesterol and Lumacaftor on the folding of CFTR helical hairpins
Biochim Biophys Acta Biomembr 184078 doi: 10.1016/j.bbamem.2022.184078 (21 October 2022)

Nicole Poulsen, Helene Hennig, Veikko F Geyer, Stefan Diez, Richard Wetherbee, Sorel Fitz-Gibbon, Matteo Pellegrini, Nils Kröger
On the role of cell surface associated, mucin-like glycoproteins in the pennate diatom Craspedostauros Australis (Bacillariophyceae)
J Phycol. Epub ahead of print. doi: 10.1111/jpy.13287 (5 October 2022)

Adrian Pascal Nievergelt, Ilia Zykov, Dennis Diener, Aditya Chhatre, Tim-Oliver Buchholz, Markus Delling, Stefan Diez, Florian Jug, Luděk Štěpánek, Gaia Pigino
Conversion of anterograde into retrograde trains is an intrinsic property of intraflagellar transport
Current Biology 32(18), R967–R969 doi: 10.1016/j.cub.2022.07.033 (26 September 2022)

Johanna E M Dickmann, Jochen C Rink, Frank Jülicher
Long-range morphogen gradient formation by cell-to-cell signal propagation
Phys. Biol. 19, 066001 doi: 10.1088/1478-3975/ac86b4 (7 September 2022)

Victoria Tianjing Yan, Arjun Narayanan, Tina Wiegand, Frank Jülicher, Stephan W. Grill
A Condensate Dynamic Instability Orchestrates Actomyosin Cortex Activation
Nature. doi: 10.1038/s41586-022-05084-3 (17 August 2022)

Falco C M J M van Delf, Alf Månsson, Hillel Kugler, Till Korten, Cordula Reuther, Jingyuan Zhu, Roman Lyttleton, Thomas Blaudeck, Christoph Robert Meinecke, Danny Reuter, Stefan Diez, Heiner Linke
Roadmap for network-based bio-computation
Nano Futures 6, 032002 doi: 10.1088/2399-1984/ac7d81 (9 August 2022)

Marie Pochitaloff, Martin Miranda, Mathieu Richard, Atitheb Chaiyasitdhi, Yasuharu Takagi, Wenxiang Cao, Enrique M. De La Cruz, James R. Sellers, Jean-François Joanny, Frank Jülicher, Laurent Blanchoin, Pascal Martin
Flagella-like beating of actin bundles driven by self-organized myosin waves
Nat. Phys. doi: 10.1038/s41567-022-01688-8 (8 August 2022)

Jonathan Bauermann, Christoph A. Weber, Frank Jülicher
Energy and Matter Supply for Active Droplets
Ann. Phys. 2200132. doi: 10.1002/andp.202200132 (3 August 2022)

Tetsuya Yamamoto, Helmut Schiessel
Loop extrusion driven volume phase transition of entangled chromosomes
Biophys J. 121(14):2742-2750. doi: 10.1016/j.bpj.2022.06.014 (19 July 2022)

Pradheebha Surendiran, Christoph Robert Meinecke, Aseem Salhotra, Georg Heldt, Jingyuan Zhu, Alf Månsson, Stefan Diez, Danny Reuter, Hillel Kugler, Heiner Linke, Till Korten
Solving Exact Cover Instances with Molecular-Motor-Powered Network-Based Biocomputation
ACS Nanosci. Au 2(5) 396–403 doi: 10.1021/acsnanoscienceau.2c00013 (23 June 2022)

Suryanarayana Maddu, Bevan L. Cheeseman, Ivo F. Sbalzarini, Christian L. Müller
Stability selection enables robust learning of differential equations from limited noisy data
Proc. R. Soc. A. 478(2262) Art. No. 20210916 doi: 10.1098/rspa.2021.0916 (15 June 2022)

Jens-Uwe Sommer, Holger Merlitz, Helmut Schiessel
Polymer-Assisted Condensation: A Mechanism for Hetero-Chromatin Formation and Epigenetic Memory
Macromolecules 55, 11, 4841–4851 doi: 10.1021/acs.macromol.2c00244 (24 May 2022)

Foram M. Joshi, Gonzalo Alvarez Viar, Gaia Pigino, Hauke Drechsler, Stefan Diez
Fabrication of high aspect ratio gold nanowires within the microtubule lumen
Nano Lett. 22(9) 3659–3667 doi: 10.1021/acs.nanolett.2c00255 (21 April 2022)

Carolina Parada, Samhita P. Banavar, Parisa Khalilian, Stephane Rigaud, Arthur Michaut, Yucen Liu, Dennis Manjaly Joshy, Otger Campàs, Jerome Gros
Mechanical feedback defines organizing centers to drive digit emergence
Dev Cell 57(7) 854–866.e6 doi: 10.1016/j.devcel.2022.03.004 (11 April 2022)

Charlie Duclut, Joris Paijmans, Mandar M. Inamdar, Carl D. Modes, Frank Jülicher
Active T1 Transitions in Cellular Networks
Eur. Phys. J. E. 45(29) doi: 10.1140/epje/s10189-022-00175-5 (23 March 2022)

Charlie Duclut, Aboutaleb Amiri, Joris Paijmans, Frank Jülicher
Coarse-grained curvature tensor on polygonal surfaces
SciPost Phys. Core 5, 011 doi: 10.21468/SciPostPhysCore.5.1.011 (11 March 2022)

Tyler S. Harmon and Frank Jülicher
Molecular Assembly Lines in Active Droplets
Phys. Rev. Lett. 128, 108102 doi: 10.1103/PhysRevLett.128.108102 (9 March 2022)

Roman Renger, Jose A. Morin, Regis Lemaitre, Martine Ruer-Gruss, Frank Jülicher, Andreas Hermann and Stephan W. Grill
Co-condensation of Proteins with Single- and Double-stranded DNA
Proc. Natl. Acad. Sci. USA 119(10), e2107871119 doi: 10.1073/pnas.2107871119 (1 March 2022)

Neharika Chamachi, Andreas Hartmann, Mai Quynh Ma , Anna Svirina, Georg Krainer, Michael Schlierf
Chaperones Skp and SurA dynamically expand unfolded OmpX and synergistically disassemble oligomeric aggregates
PNAS 119 (9) e2118919119 doi: 10.1073/pnas.2118919119 (25 February 2022)

Veit Krause, Axel Voigt
Deformable active nematic particles and emerging edge currents in circular confinements
Eur. Phys. J. E 45, 14 doi: 10.1140/epje/s10189-022-00162-w (17 February 2022)

Suryanarayana Maddu, Dominik Sturm, Christian L. Müller and Ivo F. Sbalzarini
Inverse Dirichlet weighting enables reliable training of physics informed neural networks
Machine Learning: Science and Technology, Volume 3, Number 1 doi: 10.1088/2632-2153/ac3712 (15 February 2022)

Juan M Iglesias-Artola, Björn Drobot, Mrityunjoy Kar, Anatol Fritsch, Hannes Mutschler, T-Y Dora Tang, Moritz Kreysing
Charge-density reduction promotes ribozyme activity in RNA-peptide coacervates via RNA fluidization and magnesium partitioning
Nature Chemistry 2022 doi: 10.1038/s41557-022-00890-8 (14 February 2022)

Maria Romanova-Michaelides, Zena Hadjivasiliou, Daniel Aguilar-Hidalgo, Dimitris Basagiannis, Carole Seum, Marine Dubois, Frank Jülicher, Marcos Gonzalez-Gaitan
Morphogen gradient scaling by recycling of intracellular Dpp
Nature 602, 287–293 doi: 10.1038/s41586-021-04346-w (10 February 2022)

Benjamin A. Dalton, David Oriola, Franziska Decker, Frank Jülicher, Jan Brugués
A Gelation Transition Enables the Self-organization of Bipolar Metaphase Spindles
Nat. Phys. doi: 10.1038/s41567-021-01467-x (10 February 2022)

Barbara Scalvini, Helmut Schiessel, Anatoly Golovnev, Alireza Mashaghi
Circuit topology analysis of cellular genome reveals signature motifs, conformational heterogeneity, and scaling
iScience 25(3):103866 doi: 10.1016/j.isci.2022.103866 (5 February 2022)

Jose A. Morin, Sina Wittmann, Sandeep Choubey, Adam Klosin, Stefan Golfier, Anthony A. Hyman, Frank Jülicher, Stephan W. Grill
Sequence-dependent Surface Condensation of a Pioneer Transcription Factor on DNA
Nat. Phys. doi: 10.1038/s41567-021-01462-2 (3 February 2022)

Cordula Reuther, Paula Santos-Otte, Rahul Grover, Georg Heldt, Günther Woehlke, Stefan Diez
Multiplication of Motor-driven Microtubules for Nanotechnological Applications
Nano Lett. 22(3) 926–934 doi: 10.1021/acs.nanolett.1c03619 (20 January 2022)

Jesse V. Veenvliet, Pierre-François Lenne, David A. Turner, Iftach Nachman, Vikas Trivedi
Sculpting with stem cells: how models of embryo development take shape
Development 148 (24): dev192914 doi: 10.1242/dev.192914 (15 December 2021)

Karl B. Hoffmann, Ivo F. Sbalzarini
Estimation of unordered core size using a robustness measure for topological defects in discretized orientation and vector fields
Proc. Appl. Math. Mech., 21(1): e202100105 doi: 10.1002/pamm.202100105 (14 December 2021)

Robert Kuschmierz, Elias Scharf, David F. Ortegón-González, Tom Glosemeyer, Jürgen W. Czarske
Ultra-thin 3D lensless fiber endoscopy using diffractive optical elements and deep neural networks
Light: Advanced Manufacturing 2, Article number: 30 doi: 10.37188/lam.2021.030 (6 December 2021)

Cordula Reuther, Sönke Steenhusen, Christoph Robert Meinecke, Pradheebha Surendiran, Aseem Salhotra, Frida W Lindberg, Alf Månsson, Heiner Linke, Stefan Diez
Molecular motor-driven filament transport across three-dimensional, polymeric micro-junctions
New J. Phys. 23, 125002 doi: 10.1088/1367-2630/ac39b4 (2 December 2021)

Stefano Bo, Lars Hubatsch, Jonathan Bauermann, Christoph A. Weber, Frank Jülicher
Stochastic dynamics of single molecules across phase boundaries
Phys. Rev. Research 3, 043150, doi: 10.1103/PhysRevResearch.3.043150 (2 December 2021)

Xueping Zhao, Giacomo Bartolucci, Alf Honigmann, Frank Jülicher, Christoph A Weber
Thermodynamics of Wetting, Prewetting and Surface Phase Transitions with Surface Binding
New J. Phys. 23, 123003, doi: 10.1088/1367-2630/ac320b (1 December 2021)

D. Wenzel and A. Voigt
Multiphase field models for collective cell migration
Phys. Rev. E 104, 054410 doi: 10.1103/PhysRevE.104.054410 (24 November 2021)

Luo, Weizhou; Goebel, Eva; Reipschläger, Patrick; Ellenberg, Mats Ole;
Dachselt, Raimund
Exploring and Slicing Volumetric Medical Data in Augmented Reality Using a
Spatially-Aware Mobile Device

In 2021 IEEE International Symposium on Mixed and Augmented Reality Adjunct (ISMAR-Adjunct). ISMAR '21, Bari, Italy. doi: 10.1109/ISMAR-Adjunct54149.2021.00076 (13 November 2021)

Dalileh Nabi1, Hauke Drechsler, Johannes Pschirer, Franz Korn, Nadine Schuler, Stefan Diez, Rolf Jessberger, Mariola Chacón
CENP-V is required for proper chromosome segregation through interaction with spindle microtubules in mouse oocytes.
Nat Commun 12, 6547 doi: 10.1038/s41467-021-26826-3 (11 November 2021)

Iliya D. Stoev, Benjamin Seelbinder, Elena Erben, Nicola Maghelli, Moritz Kreysing
Highly sensitive force measurements in an optically generated, harmonic hydrodynamic trap
eLight, 1, 7 doi: 10.1186/s43593-021-00007-7 (23 October 2021)

Weizhou Luo, Eva Goebel, Patrick Reipschläger, Mats Ole Ellenberg, Raimund Dachselt
Demonstrating Spatial Exploration and Slicing of Volumetric Medical Data in Augmented Reality with Handheld Devices
In 2021 IEEE International Symposium on Mixed and Augmented Reality. ISMAR '21, Bari, Italy. 2021. ISMAR21-Program-Demos (6 October 2021)

Sara N. Nagelberg✳︎, Jan F. Totz✳︎, Matthäus Mittasch, Vishnu Sresht, Lukas Zeininger, Timothy M Swager, Moritz Kreysing, Mathias Kolle
Actuation of Janus Emulsion Droplets via Optothermally Induced Marangoni Forces
Phys Rev Lett 127(14):144503 doi: 10.1103/PhysRevLett.127.144503 (1 October 2021)

Charlie Duclut︎, Joris Paijmans, Mandar M Inamdar, Carl D. Modes, Frank Jülicher
Nonlinear Rheology of Cellular Networks
Cells and Development, 203746 doi: 10.1016/j.cdev.2021.203746 (27 September 2021)

Singh, A., Incardona, P. & Sbalzarini, I.F.
A C++ expression system for partial differential equations enables generic simulations of biological hydrodynamics
Eur. Phys. J. E 44, 117 (2021). doi: 10.1140/epje/s10189-021-00121-x (23 September 2021)

Anatol W. Fritsch, Andrés F. Diaz-Delgadillo, Omar Adame-Arana, Carsten Hoege, Matthäus Mittasch, Moritz Kreysing, Mark Leaver, Anthony A. Hyman, Frank Jülicher, and Christoph A. Weber
Local thermodynamics govern formation and dissolution of Caenorhabditis elegans P granule condensates
PNAS September 14, 2021 118 (37) e2102772118 doi: 10.1073/pnas.2102772118 (14 September 2021)

Elena Erben, Benjamin Seelbinder, Iliya D. Stoev, Sergei Klykov, Nicola Maghelli, Moritz Kreysing
Feedback-based positioning and diffusion suppression of particles via optical control of thermoviscous flows
Opt Express, 29(19):30272–30283 doi: 10.1364/OE.432935 (13 September 2021)

Lange S, Friedrich BM
Network permeability changes according to a quadratic power law upon removal of a single edge
EPL, 134 (2021) 64002 doi: 10.1209/0295-5075/134/64002 (2 September 2021)

Ondřej Kucera, Valerie Siahaan, Daniel Janda, Sietske H. Dijkstra, Eliška Pilátová, Eva Zatecka, Stefan Diez, Marcus Braun, Zdenek Lansky
Anillin propels myosin-independent constriction of actin rings
Nat Commun 12, 4595 doi: 10.1038/s41467-021-24474-1 (28 July 2021)

Rank M, Voigt A
Active flows on curved surfaces
Physics of Fluids 33, 072110 doi: 10.1063/5.0056099 (21 July 2021)

Thomas Quail, Stefan Golfier, Maria Elsner, Keisuke Ishihara, Vasanthanarayan Murugesan, Roman Renger, Frank Jülicher & Jan Brugués
Force generation by protein–DNA co-condensation
Nat. Phys. doi: 10.1038/s41567-021-01285-1 (8 July 2021)

Pester, Britta; Winke, Oliver; Ligges, Carolin; Dachselt, Raimund; Gumhold,
Stefan
Immersive 3D Visualization of Multi-Modal Brain Connectivity
In EuroVis Workshop on Visual Analytics (EuroVA). EuroVA '21 The Eurographics
Association. doi: 10.2312/eurova.20211091 (14 June 2021)

Nesrine Khouzami, Lars Schütze, Pietro Incardona, Landfried Kraatz, Tina Subic, Jeronimo Castrillon, Ivo F. Sbalzarini
The OpenPME Problem Solving Environment for Numerical Simulations
In Proc. Intl. Conf. on Computational Science (ICCS), volume 12742 of Lecture Notes in Computer Science, pages 614–627 doi: 10.1007/978-3-030-77961-0_49 (9 June 2021)

Zeyu Gao, Hannes Radner, Lars Büttner, Hongwei Ye, Xinyang Li, Jürgen Czarske
Distortion correction for particle image velocimetry using multiple-input deep convolutional neural network and Hartmann-Shack sensing
Opt Express 29(12):18669–18687 doi: 10.1364/OE.419591 (7 June 2021)

Dr. Justus A. Kromer, Dr. Andrea Auconi, Prof. Dr. Benjamin M. Friedrich
Composite search of active particles in three-dimensional space based on non-directional cues
doi: 10.1002/cnma.202100156 (26 May 2021)

Tetsuya Yamamoto, Takahiro Sakaue, Helmut Schiessel
Slow chromatin dynamics enhances promoter accessibility to transcriptional condensates
Nucleic Acids Res. 49(9):5017-5027. doi: 10.1093/nar/gkab275 (21 May 2021)

Kamran Hosseini,Annika Frenzel, Elisabeth Fischer-Friedrich
EMT changes actin cortex rheology in a cell-cycle-dependent manner
Biophysical Journal, In Press, Corrected Proof doi: 10.1016/j.bpj.2021.05.006 (20 May 2021)

Chartier NT, Mukherjee A, Pfanzelter J, Fürthauer S, Larson BT, Fritsch AW, Amini R, Kreysing M, Jülicher F, Grill SW
A hydraulic instability drives the cell death decision in the nematode germline
Nature Physics, doi: 10.1038/s41567-021-01235-x (20 May 2021)

Middelkoop TC, Garcia-Baucells J, Quintero-Cadena P, Pimpale LG, Yazdi S, Sternberg PW, Gross P, Grill SW
CYK-1/Formin activation in cortical RhoA signaling centers promotes organismal left–right symmetry breaking
PNAS May 18, 2021 118 (20) e2021814118 doi: 10.1073/pnas.2021814118 (18 May 2021)

Jiawei Sun, Nektarios Koukourakis, Jochen Guck, Jürgen W. Czarske
Rapid computational cell-rotation around arbitrary axes in 3D with multi-core fiber
Biomed. Opt. Express 12(6):3423–3437 doi: 10.1364/BOE.423035 (17 May 2021)

Charlie Duclut, Jacques Prost, Frank Jülicher
Hydraulic and Electric Control of Cell Spheroids
PNAS May 11, 2021 118 (19) e2021972118, doi: 10.1073/pnas.2021972118 (11 May 2021)

Striggow F, Nadporozhskaia L, Friedrich BM, Schmidt OG, Medina-Sánchez M
Micromotor-mediated sperm constrictions for improved swimming performance
Eur. Phys. J. E 44:67, 20221 doi: 10.1140/epje/s10189-021-00050-9 (11 May 2021)

Scarselli D, Budanur NB, Timme M, Hof B
Discontinuous epidemic transition due to limited testing.
Nat Commun 12, 2586, doi: 10.1038/s41467-021-22725-9 (10 May 2021)

Luo W, Lehmann A, Yang Y, Dachselt R
Investigating Document Layout and Placement Strategies for Collaborative Sensemaking in Augmented Reality.
Extended Abstracts of the 2021 CHI Conference on Human Factors in Computing Systems (CHI EA ’21). Association for Computing Machinery, Article 456, 1–7. doi: 10.1145/3411763.3451588 (8 May 2021)

Satkowski M, Büschel W, Dachselt R
Experiences with User Studies in Augmented Reality.
CHI 2021 Workshop on Evaluating User Experiences in Mixed Reality, arXiv:2104.03795 (7 May 2021)

Ens B, Bach B, Cordeil M, Engelke U, Serrano M, Willett W, Prouzeau A, Anthes C, Büschel W, Dunne C, Dwyer T, Grubert J, Haga JH, Kirshenbaum N, Kobayashi D, Lin T, Olaosebikan M, Pointecker F, Saffo D, Saquib N, Schmalstieg S, Albers Szafir D, Whitlock M, Yang Y
Grand Challenges in Immersive Analytics.
Proceedings of the 2021 CHI Conference on Human Factors in Computing Systems (CHI ’21). Association for Computing Machinery, Article 459, 1–17. doi: 10.1145/3411764.3446866 (6 May 2021)

Satkowski M, Dachselt R
Investigating the Impact of Real-World Environments on the Perception of 2D Visualizations in Augmented Reality.
Proceedings of the 2021 CHI Conference on Human Factors in Computing Systems (CHI ’21). Association for Computing Machinery, Article 522, 1–15. doi: 10.1145/3411764.3445330 (6 May 2021)

Langner R, Satkowski M, Büschel W, Dachselt R
MARVIS: Combining Mobile Devices and Augmented Reality for Visual Data Analysis.
Proceedings of the 2021 CHI Conference on Human Factors in Computing Systems (CHI ’21). Association for Computing Machinery, Article 468, 1–17. doi: 10.1145/3411764.3445593 (6 May 2021)

Büschel W, Lehmann A, Dachselt R
MIRIA: A Mixed Reality Toolkit for the In-Situ Visualization and Analysis of Spatio-Temporal Interaction Data.
Proceedings of the 2021 CHI Conference on Human Factors in Computing Systems (CHI ’21). Association for Computing Machinery, Article 470, 1–15. doi: 10.1145/3411764.3445651 (6 May 2021)

Jiawei Sun, Nektarios Koukourakis, and Jürgen W. Czarske
Complex Wavefront Shaping through a Multi-Core Fiber
Appl. Sci. 2021, 11, 3949 doi: 10.3390/app11093949 (27 April 2021)

Samhita P. Banavar, Emmet K. Carn, Payam Rowghanian, Georgina Stooke‑Vaughan, Sangwoo Kim, Otger Campàs
Mechanical control of tissue shape and morphogenetic flows during vertebrate body axis elongation
Scientific Reports 11 (1), 1–14 (article on nature.com) (21 April 2021)

Suryanarayana Maddu, Bevan L. Cheeseman, Christian L. Müller, Ivo F. Sbalzarini
Learning physically consistent differential equation models from data using group sparsity
Phys. Rev. E 103, 042310 doi: 10.1103/PhysRevE.103.042310 (13 April 2021)

Sangwoo Kim, Marie Pochitaloff, Georgina A. Stooke-Vaughan, Otger Campàs
Embryonic tissues as active foams
Nat. Phys. doi: 10.1038/s41567-021-01215-1 (12 April 2021)

Lange S, Friedrich BM
Sperm chemotaxis in marine species is optimal at physiological flow rates according theory of filament surfing
PLoS Comp. Biol., 17(4): e1008826 doi: 10.1371/journal.pcbi.1008826 (12 April 2021)

Solovev A, Friedrich BM
Lagrangian Mechanics of Active Systems
Eur. Phys. J. E, 44:49, 2021 doi: 10.1140/epje/s10189-021-00016-x (8 April 2021)

Novak M, Friedrich BM
Bayesian gradient sensing in the presence of rotational diffusion
New J. Phys., 23:043026 doi: 10.1088/1367-2630/abdb70 (8 April 2021)

Debarghya Banerjee, Vincenzo Vitelli, Frank Jülicher, Piotr Surówka
Active Viscoelasticity of Odd Materials
Phys. Rev. Lett. 126, 138001, doi: 10.1103/PhysRevLett.126.138001 (29 March 2021)

Dye NA, Popović M, Venkatesan Iyer K, Fuhrmann JF, Piscitello-Gómez R, Eaton S, Jülicher F
Self-organized patterning of cell morphology via mechanosensitive feedback
eLife 2021;10:e57964 doi: 10.7554/eLife.57964 (26 March 2021)

K. Venkatesan Iyer, Anna Taubenberger, Salma Ahmed Zeidan, Natalie A. Dye, Suzanne Eaton, Frank Jülicher
Apico-Basal Cell Compression Regulates Lamin A/C Levels in Epithelial Tissues
Nat Commun 12, 1756, doi: 10.1038/s41467-021-22010-9 (25 March 2021)

Marta Urbanska, Annemarie Lüdecke, Wilhelm J. Walter, Antoine M. van Oijen, Karl E. Duderstadt, Stefan Diez
Highly-parallel, microfluidics-based force spectroscopy on single motor proteins
Small 17(18) 2007388 doi: 10.1002/smll.202007388 (23 March 2021)

Jose Negrete Jr, Iván M Lengyel, Laurel Rohde, Ravi A Desai, Andrew C Oates, Frank Jülicher
Theory of Time Delayed Genetic Oscillations with External Noisy Regulation
New J. Phys. 23, 033030, doi: 10.1088/1367-2630/abd80b (15 March 2021)

Marko Popović, Valentin Druelle, Natalie A Dye, Frank Jülicher, Matthieu Wyart
Inferring the flow properties of epithelial tissues from their geometry
New J. Phys. 23 033004, doi: 10.1088/1367-2630/abcbc7 (10 March 2021)

Lennart Hilbert, Yuko Sato, Ksenia Kuznetsova, Tommaso Bianucci, Hiroshi Kimura, Frank Jülicher, Alf Honigmann, Vasily Zaburdaev, Nadine L. Vastenhouw
Transcription Organizes Euchromatin via Microphase Separation
Nat Commun 12, 1360, doi: 10.1038/s41467-021-21589-3 (1 March 2021)

Suryanarayana Maddu, Dominik Sturm, Bevan L. Cheeseman, Christian L. Müller, Ivo F. Sbalzarini
Learning Computable Models From Data
WCCM-ECCOMAS2020 doi: 10.23967/wccm-eccomas.2020.190 (March 2021)

Anne Seifert, Hauke Drechsler, Julia Japtok, Till Korten, Stefan Diez, Andreas Hermann
The ALS-Associated FUS (P525L) Variant Does Not Directly Interfere with Microtubule-Dependent Kinesin-1 Motility
Int J Mol Sci 22(5):2422 doi: 10.3390/ijms22052422 (28 February 2021)

Reipschläger P, Flemisch T, Dachselt R
Personal Augmented Reality for Information Visualization on Large Interactive Displays.
IEEE Transactions on Visualization and Computer Graphics, 27 (2), 1182–1192, doi: 10.1109/TVCG.2020.3030460 (Feb 2021)

Samhita P Banavar, Michael Trogdon, Brian Drawert, Tau-Mu Yi, Linda R Petzold, Otger Campàs
Coordinating cell polarization and morphogenesis through mechanical feedback
PLoS computational biology 17 (1), e1007971 doi: 10.1371/journal.pcbi.1007971 (28 January 2021)

James Giammona, Otger Campàs
Physical constraints on early blastomere packings
PLoS Computational Biology 17 (1), e1007994 doi: 10.1371/journal.pcbi.1007994 (26 January 2021)

Hui-Shun Kuan, Wolfram Pönisch, Frank Jülicher, Vasily Zaburdaev
Continuum Theory of Active Phase Separation in Cellular Aggregates.
Phys. Rev. Lett. 126, 018102, 10.1103/PhysRevLett.126.018102 (4 January 2021)

Jordi Comelles, Soumya Ss, Linjie Lu, Emilie Le Maout, S Anvitha, Guillaume Salbreux, Frank Jülicher, Mandar M Inamdar, Daniel Riveline
Epithelial Colonies In Vitro Elongate through Collective Effects
eLife 10:e57730, doi: 10.7554/eLife.57730 (4 January 2021)

Benjamin Dalton, Ivo F. Sbalzarini, Itsuo Hanasaki
Fundamentals of the logarithmic measure for revealing multimodal diffusion.
Biophys J, Art. No. doi: 10.1016/j.bpj.2021.01.001 (January 2021)

Karl B. Hoffmann and Ivo F. Sbalzarini
Robustness of topological defects in discrete domains.
Phys. Rev. E, 103:012602 doi: 10.1103/PhysRevE.103.012602 (January 2021)

Dahmann C, Classen AK
Charting the unknown currents of cellular flows and forces.
Development, 147(24):dev186403. doi: 10.1242/dev.186403 (21 Dec 2020)

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Protein Condensates as Aging Maxwell Fluids
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André Scholich, Simon Syga, Hernán Morales-Navarrete, Fabián Segovia-Miranda, Hidenori Nonaka, Kirstin Meyer, Walter de Back, Lutz Brusch, Yannis Kalaidzidis, Marino Zerial, Frank Jülicher, Benjamin M. Friedrich
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Gina A Monzon, Lara Scharrel, Ashwin DSouza, Verena Henrichs, Ludger Santen, Stefan Diez
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Aryaman Gupta, Pietro Incardona, Ata Deniz Aydin, Stefan Gumhold, Ulrik Günther, Ivo F. Sbalzarini
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Omar Adame-Arana, Christoph A. Weber, Vasily Zaburdaev, Jacques Prost, Frank Jülicher
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Kamran Hosseini, Leon Sbosny, Ina Poser, Elisabeth Fischer-Friedrich
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Ilia Zhernov, Stefan Diez, Marcus Braun, Zdenek Lansky
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Ingo Nitschke, Sebastian Reuther, Axel Voigt
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Azaam Aziz, Stefano Pane, Veronica Iacovacci, Nektarios Koukourakis, Jürgen Czarske, Arianna Menciassi, Mariana Medina-Sánchez, and Oliver G. Schmidt
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Ulrik Günther, Kyle I.S. Harrington, Raimund Dachselt, Ivo F. Sbalzarini
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Kayvan Forouhesh Tehrani, Nektarios Koukourakis, Jürgen Czarske, Luke J Mortensen
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Sebastian Reuther, Ingo Nitschke, Axel Voigt
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Georg Krainer, Andreas Hartmann, Vadim Bogatyr, Janni Nielsen, Michael Schlierf, Daniel E. Otzen
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Kamran Hosseini, Anna Taubenberger, Carsten Werner, Elisabeth Fischer-Friedrich
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David Oriola, Frank Jülicher, Jan Brugués
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Leonard Schärfen, Miloš Tišma, Michael Schlierf
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Mohammadreza Bahadorian, Christoph Zechner, Carl D. Modes
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Verena Henrichs, Lenka Grycova, Cyril Barinka, Zuzana Nahacka, Jiri Neuzil, Stefan Diez, Jakub Rohlena, Marcus Braun, Zdenek Lansky
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Marcus Braun, Stefan Diez, Zdenek Lansky
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Alice Cezanne, Janelle Lauer, Anastasia Solomatina, Ivo F Sbalzarini, Marino Zerial
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Giuseppe Antonacci, Timon Beck, Alberto Bilenca, Jürgen Czarske, Kareem Elsayad, Jochen Guck, Kyoohyun Kim, Benedikt Krug, Francesca Palombo, Robert Prevedel, Giuliano Scarcelli
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Aniruddha Mitra, Laura Meißner, Rojapriyadharshini Gandhimathi, Roman Renger, Felix Ruhnow, Stefan Diez
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Patrick Reipschläger, Severin Engert, Raimund Dachselt
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Justus A. Kromer, Noelia de la Cruz, Benjamin M. Friedrich
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Liyuan Sui and Christian Dahmann
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Marcus Michel and Christian Dahmann
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Nora Molkenthin, Steffen Mühle, Antonia S. J. S. Mey, Marc Timme
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Georg Krainer, Mathias Schenkel, Andreas Hartmann, Dorna Ravamehr-Lake, Charles M. Deber, Michael Schlierf
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Adam Klosin, Florian Oltsch, Tyler Harmon, Alf Honigmann, Frank Jülicher, Anthony Hyman, Christoph Zechner
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Kaushikaram Subramanian, Martin Weigert, Oliver Borsch, Heike Petzold, Alfonso Garcia-Ulloa, Eugene W Myers, Marius Ader, Irina Solovei, Moritz Kreysing
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Hauke Drechsler, Yong Xu, Veikko F. Geyer, Yixin Zhang, Stefan Diez
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Oliver Beutel, Riccardo Maraspini, Karina Pombo-García, Cécilie Martin-Lemaitre, Alf Honigmann
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Alexander Mietke, V. Jemseena, K. Vijay Kumar, Ivo F. Sbalzarini, Frank Jülicher
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Aryaman Gupta, Ulrik Günther, Pietro Incardona, Ata Deniz Aydin, Raimund Dachselt, Stefan Gumhold, Ivo F. Sbalzarini
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Johannes Baumgart, Marcel Kirchner, Stefanie Redemann, Alec Bond, Jeffrey Woodruff, Jean-Marc Verbavatz, Frank Jülicher, Thomas Müller-Reichert, Anthony A. Hyman, Jan Brugués
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Moritz Kreysing
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Azaam Aziz, Mariana Medina-Sánchez, Nektarios Koukourakis, Jiawei Wang, Robert Kuschmierz, Hannes Radner, Jürgen W. Czarske, Oliver G. Schmidt
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Jana Sievers, Stefan Zschoche, Ron Dockhorn, Jens Friedrichs, Carsten Werner, Uwe Freudenberg
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Benedikt Krug, Nektarios Koukourakis, and Juergen W. Czarske
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Malte Schröder and Marc Timme
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Charlie Duclut, Niladri Sarkar, Jacques Prost, Frank Jülicher
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Axel Voigt
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Valerie Siahaan, Jochen Krattenmacher, Anthony A. Hyman, Stefan Diez, Amayra Hernández-Vega, Zdenek Lansky, Marcus Braun
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Caren Norden, Virginie Lecaudey
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Xiaozhu Zhang, Sarah Hallerberg, Moritz Matthiae, Dirk Witthaut, Marc Timme
Fluctuation-Induced Distributed Resonances in Oscillatory Networks
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Mathieu Richard, Carles Blanch-Mercader, Hajer Ennomani, Wenxiang Cao, Enrique M. De La Cruz, Jean-François Joanny, Frank Jülicher, Laurent Blanchoin, and Pascal Martin
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Hernán Morales-Navarrete, Hidenori Nonaka, André Scholich, Fabián Segovia-Miranda, Walter de Back, Kirstin Meyer, Roman L Bogorad, Victor Koteliansky, Lutz Brusch, Yannis Kalaidzidis*, Frank Jülicher*, Benjamin M Friedrich*, Marino Zerial*
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Niladri Sarkar, Jacques Prost, Frank Jülicher
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Hauke Haehne, Jose Casadiego, Joachim Peinke, Marc Timme
Detecting Hidden Units and Network Size from Perceptible Dynamics
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Ingo Nitschke, Sebastian Reuther, Axel Voigt
Hydrodynamic interactions in polar liquid crystals on evolving surfaces
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Stefan Münster, Akanksha Jain, Alexander Mietke, Anastasios Pavlopoulos, Stephan W. Grill, Pavel Tomancak
Attachment of the blastoderm to the vitelline envelope affects gastrulation of insects.
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Uwe Freudenberg, Passant Atallah, Yanuar Dwi Putra Limasale, Carsten Werner
Charge-tuning of glycosaminoglycan-based hydrogels to program cytokine sequestration
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K. Venkatesan Iyer, Romina Piscitello-Gómez, Joris Paijmans, Frank Jülicher, Suzanne Eaton
Epithelial Viscoelasticity is Regulated by Mechanosensitive E-cadherin Turnover
Current Biology 29 (4), 578–591.e5, doi: 10.1016/j.cub.2019.01.021 (18 Feb 2019)

Louise M. Jawerth, Mahdiye Ijavi, Martine Ruer, Shambaditya Saha, Marcus Jahnel, Anthony A. Hyman, Frank Jülicher, and Elisabeth Fischer-Friedrich
Salt-Dependent Rheology and Surface Tension of Protein Condensates Using Optical Traps
Phys. Rev. Lett. 121, 258101 doi: 10.1103/PhysRevLett.121.258101 (18 Dec 2018)