Publications

Kamran Hosseini, Leon Sbosny, Ina Poser, Elisabeth Fischer-Friedrich
Binding Dynamics of α-Actinin-4 in Dependence of Actin Cortex Tension
Biophys J., 119(6):1091–1107 doi: 10.1016/j.bpj.2020.07.031 (15 September 2020)

Ilia Zhernov, Stefan Diez, Marcus Braun, Zdenek Lansky
Intrinsically Disordered Domain of Kinesin-3 Kif14 Enables Unique Functional Diversity
Current Biology 30, 1–10 doi: 10.1016/j.cub.2020.06.039 (7 September 2020)

Ingo Nitschke, Sebastian Reuther, Axel Voigt
Liquid crystals on deformable surfaces
Proc. R. Soc. A.47620200313 doi: 10.1098/rspa.2020.0313 (2 September 2020)

Azaam Aziz, Stefano Pane, Veronica Iacovacci, Nektarios Koukourakis, Jürgen Czarske, Arianna Menciassi, Mariana Medina-Sánchez, and Oliver G. Schmidt
Medical Imaging of Microrobots: Toward In Vivo Applications
CS Nano 2020, 14, 9, 10865–10893 doi: 10.1021/acsnano.0c05530 (1 September 2020)

Kayvan Forouhesh Tehrani, Nektarios Koukourakis, Jürgen Czarske, Luke J Mortensen
In situ measurement of the isoplanatic patch for imaging through intact bone
J. Biophotonics. Accepted Author Manuscript. doi: 10.1002/jbio.202000160 (25 August 2020)

Sebastian Reuther, Ingo Nitschke, Axel Voigt
A numerical approach for fluid deformable surfaces
Journal of Fluid Mechanics, 900, R8. doi: 10.1017/jfm.2020.564 (12 August 2020)

Georg Krainer, Andreas Hartmann, Vadim Bogatyr, Janni Nielsen, Michael Schlierf, Daniel E. Otzen
SDS-induced multi-stage unfolding of a small globular protein through different denatured states revealed by single-molecule fluorescence
Chem. Sci. 2020, Advance Article doi: 10.1039/D0SC02100H (10 August 2020)

Kamran Hosseini, Anna Taubenberger, Carsten Werner, Elisabeth Fischer-Friedrich
EMT-Induced Cell-Mechanical Changes Enhance Mitotic Rounding Strength
Adv. Sci. 2020, 2001276. doi: 10.1002/advs.202001276 (9 August 2020)

David Oriola, Frank Jülicher, Jan Brugués
Active forces shape the metaphase spindle through a mechanical instability
PNAS 117(28) 16154–16159 doi: 10.1073/pnas.2002446117 (14 July 2020)

Leonard Schärfen, Miloš Tišma, Michael Schlierf
Fast, simultaneous tagging and mutagenesis of genes on bacterial chromosomes
ACS Synth. Biol. 2020, 9, 8, 2203–2207 doi: 10.1021/acssynbio.0c00202 (9 July 2020)

Mohammadreza Bahadorian, Christoph Zechner, Carl D. Modes
Gift of gab: Probing the limits of dynamic concentration-sensing across a networkof communicating cells
Phys. Rev. Research 2, 023403 doi: 10.1103/PhysRevResearch.2.023403 (25 June 2020)

Verena Henrichs, Lenka Grycova, Cyril Barinka, Zuzana Nahacka, Jiri Neuzil, Stefan Diez, Jakub Rohlena, Marcus Braun, Zdenek Lansky
Mitochondria-adaptor TRAK1 promotes kinesin-1 driven transport in crowded environments
Nat Commun 11, 3123 doi: 10.1038/s41467-020-16972-5 (19 June 2020)

Marcus Braun, Stefan Diez, Zdenek Lansky
Cytoskeletal organization through multivalent interactions
J Cell Sci 133, jcs234393 doi: 10.1242/jcs.234393 (15 June 2020)

Alice Cezanne, Janelle Lauer, Anastasia Solomatina, Ivo F Sbalzarini, Marino Zerial
A non-linear system patterns Rab5 GTPase on the membrane
eLife 2020;9:e54434 doi: 10.7554/eLife.54434 (8 June 2020)

Giuseppe Antonacci, Timon Beck, Alberto Bilenca, Jürgen Czarske, Kareem Elsayad, Jochen Guck, Kyoohyun Kim, Benedikt Krug, Francesca Palombo, Robert Prevedel, Giuliano Scarcelli
Recent progress and current opinions in Brillouin microscopy for life science applications
Biophys Rev doi: 10.1007/s12551-020-00701-9 (26 May 2020)

Aniruddha Mitra, Laura Meißner, Rojapriyadharshini Gandhimathi, Roman Renger, Felix Ruhnow, Stefan Diez
Kinesin-14 motors drive a right-handed helical motion of antiparallel microtubules around each other
Nat Commun 11, 2565 doi: 10.1038/s41467-020-16328-z (22 May 2020)

Patrick Reipschläger, Severin Engert, Raimund Dachselt
Augmented Displays: Seamlessly Extending Interactive Surfaces With Head-Mounted Augmented Reality.
In Extended Abstracts of the 2020 CHI Conference on Human Factors in Computing Systems (CHI EA '20). Association for Computing Machinery, New York, NY, USA, 1–4. doi: 10.1145/3334480.3383138 (April 2020)

Wolfgang Büschel, Georg Eckert, Raimund Dachselt
Challenges in Collaborative Immersive Visualization.
CHI 2020 Workshop on Immersive Analytics: Envisioning Future Productivity for Immersive Analytics. (April 2020)

Marcel Mokbel, Kamran Hosseini, Sebastian Aland, Elisabeth Fischer-Friedrich
The Poisson Ratio of the Cellular Actin Cortex Is Frequency Dependent.
Biophys J. 118(8):1968–1976. doi:10.1016/j.bpj.2020.03.002 (21 Apr 2020)

Justus A. Kromer, Noelia de la Cruz, Benjamin M. Friedrich
Chemokinetic Scattering, Trapping, and Avoidance of Active Brownian Particles
Phys. Rev. Lett. 124, 118101 doi: 10.1103/PhysRevLett.124.118101 (17 March 2020)

Liyuan Sui and Christian Dahmann
Wingless counteracts epithelial folding by increasing mechanical tension at basal cell edges in Drosophila
Development 147(5) dev184713. doi: 10.1242/dev.184713 (11 March 2020)

Marcus Michel and Christian Dahmann
Tissue mechanical properties modulate cell extrusion in the Drosophila abdominal epidermis
Development 147(5) dev179606. doi: 10.1242/dev.179606 (11 March 2020)

Nora Molkenthin, Steffen Mühle, Antonia S. J. S. Mey, Marc Timme
Self-organized emergence of folded protein-like network structures from geometric constraints.
PLoS ONE 15(2): e0229230 doi: 10.1371/journal.pone.0229230 (27 Feb 2020)

Georg Krainer, Mathias Schenkel, Andreas Hartmann, Dorna Ravamehr-Lake, Charles M. Deber, Michael Schlierf
CFTR transmembrane segments are impaired in their conformational adaptability by a pathogenic loop mutation and dynamically stabilized by Lumacaftor
J. Biol. Chem. 295:1985–1991 doi: 10.1074/jbc.AC119.011360 (14 Feb 2020)

Adam Klosin, Florian Oltsch, Tyler Harmon, Alf Honigmann, Frank Jülicher, Anthony Hyman, Christoph Zechner
Phase separation provides a mechanism to reduce noise in cells.
Science 367(6476):464–468. doi: 10.1126/science.aav6691 (24 Jan 2020)

Kaushikaram Subramanian, Martin Weigert, Oliver Borsch, Heike Petzold, Alfonso Garcia-Ulloa, Eugene W Myers, Marius Ader, Irina Solovei, Moritz Kreysing
Rod nuclear architecture determines contrast transmission of the retina and behavioral sensitivity in mice
eLife 2019;8:e49542 doi: 10.7554/eLife.49542 (11 Dec 2019)

Hauke Drechsler, Yong Xu, Veikko F. Geyer, Yixin Zhang, Stefan Diez
Multivalent electrostatic microtubule-interactions of synthetic peptides are sufficient to mimic advanced MAP-like behaviour
Mol Biol Cell 30(24), 2953–2968 doi: 10.1091/mbc.E19-05-0247 (14 Nov 2019)

Oliver Beutel, Riccardo Maraspini, Karina Pombo-García, Cécilie Martin-Lemaitre, Alf Honigmann
Phase Separation of Zonula Occludens Proteins Drives Formation of Tight Junctions
Cell 179(4), 923-936.e11 doi: 10.1016/j.cell.2019.10.011 (31 Oct 2019)

Alexander Mietke, V. Jemseena, K. Vijay Kumar, Ivo F. Sbalzarini, Frank Jülicher
Minimal model of cellular symmetry breaking
Phys. Rev. Lett. 123, 188101 doi: 10.1103/PhysRevLett.123.188101 (28 Oct 2019)

Aryaman Gupta, Ulrik Günther, Pietro Incardona, Ata Deniz Aydin, Raimund Dachselt, Stefan Gumhold, Ivo F. Sbalzarini
A Proposed Framework for Interactive Virtual Reality In Situ Visualization of Parallel Numerical Simulations
IEEE 9th Symposium on Large Data Analysis and Visualization (LDAV), Vancouver, BC, Canada, 2019, pp. 95–96, doi: 10.1109/LDAV48142.2019.8944368 (21 Oct 2019)

Johannes Baumgart, Marcel Kirchner, Stefanie Redemann, Alec Bond, Jeffrey Woodruff, Jean-Marc Verbavatz, Frank Jülicher, Thomas Müller-Reichert, Anthony A. Hyman, Jan Brugués
Soluble tubulin is significantly enriched at mitotic centrosomes
J. Cell Biol. jcb.201902069; doi: 10.1083/jcb.201902069 (21 Oct 2019)

Moritz Kreysing
Probing the Functional Role of Physical Motion in Development
Dev Cell, 51(2) 135-144 doi: 10.1016/j.devcel.2019.10.002 (21 Oct 2019)

Azaam Aziz, Mariana Medina-Sánchez, Nektarios Koukourakis, Jiawei Wang, Robert Kuschmierz, Hannes Radner, Jürgen W. Czarske, Oliver G. Schmidt
Real-Time IR Tracking of Single Reflective Micromotors through Scattering Tissues
Adv Funct Mater, 1905272 doi: 10.1002/adfm.201905272 (21 Oct 2019)
* corresponding authors

Jana Sievers, Stefan Zschoche, Ron Dockhorn, Jens Friedrichs, Carsten Werner, Uwe Freudenberg
Temperature-Induced Mechanomodulation of Interpenetrating Networks of Star Poly(ethylene glycol)–Heparin and Poly(N-isopropylacrylamide)
ACS Appl. Mater. Interfaces 2019, 11, 45, 41862–41874 doi: 10.1021/acsami.9b11719 (7 Oct 2019)

Benedikt Krug, Nektarios Koukourakis, and Juergen W. Czarske
Impulsive stimulated Brillouin microscopy for non-contact, fast mechanical investigations of hydrogels
Optics Express 27 (19), 26910–26923 doi: 10.1364/OE.27.026910 (16 Sep 2019)

Malte Schröder and Marc Timme
Asymmetry in repeated isotropic rotations
Phys. Rev. Research 1, 023012 doi: 10.1103/PhysRevResearch.1.023012 (10 Sep 2019)

Aryaman Gupta, Ulrik Günther, Pietro Incardona, Ata Deniz Aydin, Raimund Dachselt, Stefan Gumhold, Ivo F. Sbalzarini
A Proposed Framework for Interactive Virtual Reality In Situ Visualization of Parallel Numerical Simulations
Proc. IEEE Symposium on Large Data Analysis and Visualization, Vancouver, Canada arXiv: 1909.02986 (6 Sep 2019)

Charlie Duclut, Niladri Sarkar, Jacques Prost, Frank Jülicher
Fluid pumping and active flexoelectricity can promote lumen nucleation in cell assemblies
Proc. Natl. Acad. Sci. USA, 116, 19264 doi: 10.1073/pnas.1908481116 (6 Sep 2019)

Axel Voigt
Fluid deformable surfaces
J. Fluid Mech. 878, 1–4 doi: 10.1017/jfm.2019.549 (4 Sept 2019)

Valerie Siahaan, Jochen Krattenmacher, Anthony A. Hyman, Stefan Diez, Amayra Hernández-Vega, Zdenek Lansky, Marcus Braun
Kinetically distinct phases of tau on microtubules regulate kinesin motors and severing enzymes
Nat. Cell Biol. 21, 1086–1092, doi: 10.1038/s41556-019-0374-6 (2 Sep 2019)

Caren Norden, Virginie Lecaudey
Collective cell migration: general themes and new paradigms
Curr Opin Genet Dev. 57, 54–60. doi: 10.1016/j.gde.2019.06.013 (18 Aug 2019)

Xiaozhu Zhang, Sarah Hallerberg, Moritz Matthiae, Dirk Witthaut, Marc Timme
Fluctuation-Induced Distributed Resonances in Oscillatory Networks
Science Adv. 5:eaav1027 doi: 10.1126/sciadv.aav1027 (31 July 2019)

Mathieu Richard, Carles Blanch-Mercader, Hajer Ennomani, Wenxiang Cao, Enrique M. De La Cruz, Jean-François Joanny, Frank Jülicher, Laurent Blanchoin, and Pascal Martin
Active cargo positioning in antiparallel transport networks
PNAS 116 (30) 14835–14842 doi: 10.1073/pnas.1900416116 (9 July 2019)

Hernán Morales-Navarrete, Hidenori Nonaka, André Scholich, Fabián Segovia-Miranda, Walter de Back, Kirstin Meyer, Roman L Bogorad, Victor Koteliansky, Lutz Brusch, Yannis Kalaidzidis*, Frank Jülicher*, Benjamin M Friedrich*, Marino Zerial*
Liquid-crystal organization of liver tissue
eLife 2019;8:e44860, doi: 10.7554/eLife.44860 (17 June 2019)
* corresponding authors

Niladri Sarkar, Jacques Prost, Frank Jülicher
Field induced cell proliferation and death in a model epithelium
New J. Phys. 21 043035 10.1088/1367-2630/ab0a8d (17 Apr 2019)

Hauke Haehne, Jose Casadiego, Joachim Peinke, Marc Timme
Detecting Hidden Units and Network Size from Perceptible Dynamics
Phys. Rev. Lett. 122, 158301 doi: 10.1103/PhysRevLett.122.158301 (16 April 2019)

Ingo Nitschke, Sebastian Reuther, Axel Voigt
Hydrodynamic interactions in polar liquid crystals on evolving surfaces
Phys. Rev. Fluids, doi: 10.1103/PhysRevFluids .4.044002 (8 Apr 2019)

Stefan Münster, Akanksha Jain, Alexander Mietke, Anastasios Pavlopoulos, Stephan W. Grill, Pavel Tomancak
Attachment of the blastoderm to the vitelline envelope affects gastrulation of insects.
Nature, doi: 10.1038/s41586-019-1044-3 (27 March 2019)

Uwe Freudenberg, Passant Atallah, Yanuar Dwi Putra Limasale, Carsten Werner
Charge-tuning of glycosaminoglycan-based hydrogels to program cytokine sequestration
Faraday Discuss. 219, 244–251 doi: 10.1039/C9FD00016J (22 Feb 2019)

K. Venkatesan Iyer, Romina Piscitello-Gómez, Joris Paijmans, Frank Jülicher, Suzanne Eaton
Epithelial Viscoelasticity is Regulated by Mechanosensitive E-cadherin Turnover
Current Biology 29 (4), 578–591.e5, doi: 10.1016/j.cub.2019.01.021 (18 Feb 2019)

Louise M. Jawerth, Mahdiye Ijavi, Martine Ruer, Shambaditya Saha, Marcus Jahnel, Anthony A. Hyman, Frank Jülicher, and Elisabeth Fischer-Friedrich
Salt-Dependent Rheology and Surface Tension of Protein Condensates Using Optical Traps
Phys. Rev. Lett. 121, 258101 doi: 10.1103/PhysRevLett.121.258101 (18 Dec 2018)